Basic Information

Insect: Polydrusus cervinus
Gene Symbol: -
Assembly: GCA_935413225.1
Location: CAKXYS010000071.1:410179-419994[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00016 0.016 16.9 0.4 2 23 175 197 174 197 0.96

2 21 2.9 3e+02 3.5 5.7 1 21 475 495 475 496 0.94

3 21 2.6 2.7e+02 3.6 6.8 1 23 525 548 525 548 0.96

4 21 3 3e+02 3.5 0.9 1 19 581 599 581 604 0.90

5 21 0.00034 0.034 15.9 1.0 2 23 693 714 692 714 0.98

6 21 0.17 17 7.4 0.1 1 23 737 759 737 759 0.94

7 21 7.2e-05 0.0074 18.0 0.4 2 23 763 784 762 784 0.96

8 21 8.6e-05 0.0088 17.7 1.8 2 23 819 841 818 841 0.96

9 21 1.3 1.3e+02 4.6 0.3 2 23 884 906 883 906 0.93

10 21 0.004 0.41 12.5 0.6 2 23 919 940 918 940 0.97

11 21 0.021 2.2 10.2 1.3 2 23 954 975 953 975 0.97

12 21 0.00049 0.05 15.4 4.6 1 23 1017 1039 1017 1039 0.98

13 21 0.099 10 8.1 0.6 2 23 1059 1081 1058 1081 0.90

14 21 0.0027 0.28 13.0 0.2 1 23 1106 1128 1106 1128 0.97

15 21 0.00034 0.035 15.9 1.0 2 23 1143 1165 1142 1165 0.95

16 21 0.0046 0.47 12.3 0.5 1 23 1186 1208 1186 1208 0.91

17 21 2.3 2.4e+02 3.8 0.1 1 23 1259 1282 1259 1282 0.93

18 21 0.0057 0.59 12.0 1.3 2 23 1293 1314 1293 1314 0.97

19 21 0.00015 0.015 17.0 1.4 1 23 1361 1384 1361 1384 0.96

20 21 1.9e-05 0.002 19.8 0.7 1 23 1392 1414 1392 1414 0.98

21 21 0.00035 0.036 15.8 0.5 1 23 1439 1462 1439 1462 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00016	0.016	16.9	0.4	2	23	175	197	174	197	0.96
2	21	2.9	3e+02	3.5	5.7	1	21	475	495	475	496	0.94
3	21	2.6	2.7e+02	3.6	6.8	1	23	525	548	525	548	0.96
4	21	3	3e+02	3.5	0.9	1	19	581	599	581	604	0.90
5	21	0.00034	0.034	15.9	1.0	2	23	693	714	692	714	0.98
6	21	0.17	17	7.4	0.1	1	23	737	759	737	759	0.94
7	21	7.2e-05	0.0074	18.0	0.4	2	23	763	784	762	784	0.96
8	21	8.6e-05	0.0088	17.7	1.8	2	23	819	841	818	841	0.96
9	21	1.3	1.3e+02	4.6	0.3	2	23	884	906	883	906	0.93
10	21	0.004	0.41	12.5	0.6	2	23	919	940	918	940	0.97
11	21	0.021	2.2	10.2	1.3	2	23	954	975	953	975	0.97
12	21	0.00049	0.05	15.4	4.6	1	23	1017	1039	1017	1039	0.98
13	21	0.099	10	8.1	0.6	2	23	1059	1081	1058	1081	0.90
14	21	0.0027	0.28	13.0	0.2	1	23	1106	1128	1106	1128	0.97
15	21	0.00034	0.035	15.9	1.0	2	23	1143	1165	1142	1165	0.95
16	21	0.0046	0.47	12.3	0.5	1	23	1186	1208	1186	1208	0.91
17	21	2.3	2.4e+02	3.8	0.1	1	23	1259	1282	1259	1282	0.93
18	21	0.0057	0.59	12.0	1.3	2	23	1293	1314	1293	1314	0.97
19	21	0.00015	0.015	17.0	1.4	1	23	1361	1384	1361	1384	0.96
20	21	1.9e-05	0.002	19.8	0.7	1	23	1392	1414	1392	1414	0.98
21	21	0.00035	0.036	15.8	0.5	1	23	1439	1462	1439	1462	0.94

Sequence Information

Coding Sequence: ATGGCTGAGACTCCTGCGGATATTCAAGCCGTTTGCAGGCTCTGTCTCTCCAGCAGAAAGGACGCGTTAAAATCGATATTTGACGGGGAACTGGGGCCTAATAAACTTCCTCAAAAGATACGGCATCTAATTTTGATTCAGGTTACCAGAAATGACAAATTACCTACCATGGTATGTAATGACTGCATCATTAGACTTGATACTTGGTTTTCCTATAAAAAGCAATGTCACAGAAACCAGGCTACGTTGGCAGAATGGTTGAGCAAAACTACTGGACAAAACGTGCTTGACGTGaacaTTCATATAAAATCTGAACCGCTTGATATTGACTCATCGCGTCATGGACCACTCCCATTTAAGATGGAGTATCCGGTGAACCCCGACATGATGGATGTAGAATTTAATGAATTCGACGACGACGAATTGAGACATACATATCCTCCATACCCTCAGAATTCAGACCATGTCTACTTGGAGGATTTACAAAGGGCCGGGTTGGAGGAATCAGAAGCAACTAGTCTAAAATGCCCTGAGTGTGGAAAAGCATTCGGTAGCGTACAAAACCGCCGACGTCACCAAAACATGCAGCATAGAAAAGACAAAAGGGCCCAAATGATGGAAATTAGAAAGCCGCCACCAGAACTACCAACAGAACCAATAGCTGATCCTCAGCCTGATGACAATTCTGGACAAATCACTAGTACAGGTTCTGTAGAAACCTCGGACCAGCCACCTGTTAGTTCTGCTGATGAAAATTCGAAACCGGCAACTGATATCAGTACTGAGCCAACTGAAGCACATTCTGAGCAACCAAATGGTATCTCAGAACTCAATTTAGAGCAAGCAATTATTAGTAATGGTGAACAAAATTGTGCCACTCAAAGTATTAATGACACTGCTATGGATACTACTTCTATTGAAACTAGTACTTCTGTAGAAACATCTAAAGAAGCTTTGACTGAAACTCCGAATGAAACCGCATCAGAAGATAAGCTCCAAGAAGTAGATAATATTAAAGATAATGACGAAAAACCGCTAGAAGACATAGATGACGCAAGGATTAAAGAAGAATTAACAGGAAACCAGGACAAATCGGTTAAAATAGAAGATACTCCCAAAGAAAATTCACTTGAAGAAAAATCCTCCATTGAAAACCAAAATCAACAAGATGAAAAACCCGACGTGTTAAACGACAATGACCaacaaaaaattgaatttgCTGCTGGGCTAAAACTTGTGCAAAAGGACTCCACGCATATAGAGTTTGAATCTTTATCCAAAACTGAACTTAGTTACATTGAAAAATGTAAGGCTATGGTTTCCATGTTCCACAGTCTTCAATGTGCGTGTCACAATGTACAGCACAAATCCCTTCGTCACCTTCTGTCACATTTAAGGGAAATCCGAGTCTGGTTTCCACTCTTTACTTGTTATAGCTGTATGATTTCTTTTACTGATAGATCTACTTTTACCAAACATCACTGTAGATGCCCCAAAGGTCAATTGGAGACTCTTATCAAGCTATCTAATTTAAGGAAACGAAGTGAAATCAAAACAAGAttatatcaaaattataaatgcaATAGGTGTAAGTTTTTGTACAGTTTTCATGAAGACTTTTGTAAACACATTAATGAGGATCACGACCCTGGAGCGCCACCTATTTATTGTTCTtgtagaaccgtatttgattctgTAGAAGAGTACAAGACTCACTGTCATACGTCCTGCGTACTTTCTTACTATTGCgatatttgttttataactACCGTTACCATTGATGAATTCGTAAAACATTGTCAGGAAGTGCATGACACTTCTGAGGGATTTGTCTTGCTTCAGGCAGACTGTTATACTCCACGGGCCAGTTACAGTTATCGCAAGGAGGTTGACGAAGAACATGTCGTTGAAGGCAAAAGAGAACGTAGAAAGTCAGCGAAGGAACCCATCATGGTACATGTGTATGACAATGAAATTCCTCCAGATCTGAGAGACATTCCTACCAGAATAGTAAGGCAATTGGTTAAATTGGACTTTACGCCCACCACTGCGCATGAATGGAATAAATCTCCTACAAAGTGTCCTCTGTGCCAAAAAGAATATTCCAGTGTAAATAATATGGTAAGACATTATCGAACTCACATCGAAAAACAAGAAGTGGAAATACCATTTCCACTTGATGACGGAGAAGGAGAAAATGAAGATCTATATTCTTGTCCGGAATGTGGAGGAATGTATCCTGCGTCAAAATGGAAGAAACACATTCAAGAGAAACATCAACCTGTAAGTTGCACTGAGTGCGACAAAGTATTCCAGTTTCAGAGTGAGTTGGAGCAACATAGAAGTGTCCATTTGAACCTCAAAGTGTATAGAGATTCAAAAACGCATTCATATAGAACAGCAGTTATAAGTCCCGGAGCTGAAACGAATGGTATTCTCGGCGGAGTTATGGTGATGTGTGAAATTTGCGATACTATGTTTAAGAGCAAAGAAGAGTTAAAGCATCATAAATTAACTCAACATGATAGTAGCAATATGTCTCATGCGAGTAGCTCGTTGGAAAACTTTGATATGATTGAGGAGAAAAAGGAGGAAGCAGTAGATTCCAAAAGAACTAGCGTTACTGACTATTCACTGGAAGGAAAGTTACCTTGCGATTATTGCAGTAATCTATACGCCAGCACAAAAAGTCTTAGAGATCACGTTATGAATAAGCATGGAGCAGACTTCATAAAGAAGAGCGAATACCCTAAGAAGTGCGAGTACTGCGACAAGGTTTGCACCACAGGGGCAGGTCTAGCTCTCCACACACAAGTTCACGAAAGGTGTAACCCTGAAAAGAAAAGCGAATTTCCTAAAAAGTGCGAATACTGCGATAAGATATGTACAACCGGGGCGGGCCTGTACCTACACACCCAAATGCACGAGAGAATGACTTTGGGTGatgtaaaaaaggaaaaagtgGTTGCAACTAAAACAGTGACTATTAAACAGGAGGTTATTAAGGAAATAAAGAAACAGGAAGATAAAGAGGAAGAAGAGTCTTATCACACTTGTAAACGATGCTTTAAAGTGTTTGGTACCAAAGGTAAACTGAAGGATCACATGAAGAGCCATGGGATTCATTCTAGTAAGCCTGGTCCCAAACCAGGAATAAAAAAGAATAGAAAAATTCACTGTGACCTTTGCCATATTGCTGTAGAGAATAATAGCGCCTTGACGAAGCACAAGGCAGAGGAACACAGCGATGAACTAGATGGCATGCCAACTTTGAAAAACGAATTGGAAGCTGATGAAGATAAATCGAATTTTGTTTACACTTGCGATATTTGCGTTGAGACGTTTGATTCAAAACTTGAGCTTCAAGAGCACAAGGAAATTCACGATAAACCGAATATCATAGCCAAGAccaaaaatactttaatttattgtaaatattgtaaGATTGCTTTTAGCTCTATTAATGAACTGACCAAGCATATGCATGTAGAGCACGGTGAGAGTGCCAAACCCAAGGTGACCAAAGAAAAATCAGGACAAAATGGTGACAAGTCTTTCAAATGCTCAATTTGTTCGAAAGGCTTTGCAACTCATGGGGCGATGACAGCCCATTTTGGTTGGCACAAGCGGTCTGGTAACACCCTGGAAATTCCGGAGAAGTCCGAGAATACACCTCAAGGTACCGCAGTAGTAAAAATGGCCAAGAAAGCAAAATTGTTAAGGAAAGTTGCTCAAGCTGTAGTTAATAAGCAGGAACCGATTGAACCTCCAGAATTCCAATGTACTACGTGTTTCATGGAACTACCAAATGACACTGCATTGCAAATTCATGTACTTGAAAAGCATCGAGGTTTGGACTCGCTCATGCTCATACCAAGATGCGACACTTGCAATCAAGATTTCGTAACCCAAGACGAATACGAAACACATAAACGTTTCCATGACTTTTTAAGTCGGCAAAAAAAACACGAGGAACAACTTAAAACTCAACAACAAACTCCCGTGCAAGACCTAATACAAACACCGATAATACAGAGCGTGCAAAGCGTGGTAGAATCCCCTCATAGTAGCCCCAAAAGGCACCAATGCAGTTGGTGCCCCTCCGTTTTCAGTAGGAGCGACACGTTAAATACTCACATTAAACAGAACCATAAAGAACATGTTAAGACGGAGTTTGAATGCACGCAATGTGATAGGGTCTTTGAGaaacaaaattcgttaactattcaCCTTAAGGTACATGAAAAACAAAAGAATGCTGCTGCAGCTAGTGCCTCTGTGGTTGTTGGTGGTGGTGGCGCCGGAGGCAAAGTTTATTCTTGTTCgatctgcagtcaaggttttAGTTTTCCGAAAGATTTAAGAAAGCATACTATTAACGCCCATCCTTTTTGA
Protein Sequence: MAETPADIQAVCRLCLSSRKDALKSIFDGELGPNKLPQKIRHLILIQVTRNDKLPTMVCNDCIIRLDTWFSYKKQCHRNQATLAEWLSKTTGQNVLDVNIHIKSEPLDIDSSRHGPLPFKMEYPVNPDMMDVEFNEFDDDELRHTYPPYPQNSDHVYLEDLQRAGLEESEATSLKCPECGKAFGSVQNRRRHQNMQHRKDKRAQMMEIRKPPPELPTEPIADPQPDDNSGQITSTGSVETSDQPPVSSADENSKPATDISTEPTEAHSEQPNGISELNLEQAIISNGEQNCATQSINDTAMDTTSIETSTSVETSKEALTETPNETASEDKLQEVDNIKDNDEKPLEDIDDARIKEELTGNQDKSVKIEDTPKENSLEEKSSIENQNQQDEKPDVLNDNDQQKIEFAAGLKLVQKDSTHIEFESLSKTELSYIEKCKAMVSMFHSLQCACHNVQHKSLRHLLSHLREIRVWFPLFTCYSCMISFTDRSTFTKHHCRCPKGQLETLIKLSNLRKRSEIKTRLYQNYKCNRCKFLYSFHEDFCKHINEDHDPGAPPIYCSCRTVFDSVEEYKTHCHTSCVLSYYCDICFITTVTIDEFVKHCQEVHDTSEGFVLLQADCYTPRASYSYRKEVDEEHVVEGKRERRKSAKEPIMVHVYDNEIPPDLRDIPTRIVRQLVKLDFTPTTAHEWNKSPTKCPLCQKEYSSVNNMVRHYRTHIEKQEVEIPFPLDDGEGENEDLYSCPECGGMYPASKWKKHIQEKHQPVSCTECDKVFQFQSELEQHRSVHLNLKVYRDSKTHSYRTAVISPGAETNGILGGVMVMCEICDTMFKSKEELKHHKLTQHDSSNMSHASSSLENFDMIEEKKEEAVDSKRTSVTDYSLEGKLPCDYCSNLYASTKSLRDHVMNKHGADFIKKSEYPKKCEYCDKVCTTGAGLALHTQVHERCNPEKKSEFPKKCEYCDKICTTGAGLYLHTQMHERMTLGDVKKEKVVATKTVTIKQEVIKEIKKQEDKEEEESYHTCKRCFKVFGTKGKLKDHMKSHGIHSSKPGPKPGIKKNRKIHCDLCHIAVENNSALTKHKAEEHSDELDGMPTLKNELEADEDKSNFVYTCDICVETFDSKLELQEHKEIHDKPNIIAKTKNTLIYCKYCKIAFSSINELTKHMHVEHGESAKPKVTKEKSGQNGDKSFKCSICSKGFATHGAMTAHFGWHKRSGNTLEIPEKSENTPQGTAVVKMAKKAKLLRKVAQAVVNKQEPIEPPEFQCTTCFMELPNDTALQIHVLEKHRGLDSLMLIPRCDTCNQDFVTQDEYETHKRFHDFLSRQKKHEEQLKTQQQTPVQDLIQTPIIQSVQSVVESPHSSPKRHQCSWCPSVFSRSDTLNTHIKQNHKEHVKTEFECTQCDRVFEKQNSLTIHLKVHEKQKNAAAASASVVVGGGGAGGKVYSCSICSQGFSFPKDLRKHTINAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01241111; iTF_00196606;
90% Identity: -
80% Identity: -