Basic Information

Insect: Barypeithes pellucidus
Gene Symbol: -
Assembly: GCA_963991005.1
Location: OZ022558.1:71999686-72008341[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00019 0.017 16.9 0.4 2 23 184 206 183 206 0.96

2 21 2.3 2e+02 4.0 5.5 1 21 490 510 490 511 0.94

3 21 4.1 3.7e+02 3.2 6.6 1 23 540 563 540 563 0.96

4 21 3.5 3.1e+02 3.5 0.9 1 19 596 614 596 619 0.90

5 21 0.0003 0.027 16.2 1.0 2 23 709 730 708 730 0.98

6 21 0.52 47 6.1 0.1 1 23 753 775 753 775 0.90

7 21 0.00038 0.034 15.9 0.3 2 23 779 800 778 800 0.96

8 21 0.00057 0.051 15.4 1.3 2 23 835 857 834 857 0.96

9 21 0.56 50 6.0 0.2 2 23 902 924 901 924 0.94

10 21 0.0047 0.42 12.5 0.6 2 23 937 958 936 958 0.97

11 21 0.025 2.3 10.2 1.3 2 23 972 993 971 993 0.97

12 21 0.00058 0.052 15.3 4.6 1 23 1035 1057 1035 1057 0.98

13 21 0.63 56 5.8 0.3 2 22 1077 1097 1076 1099 0.88

14 21 0.0015 0.14 14.0 0.1 1 23 1125 1147 1125 1147 0.97

15 21 0.0004 0.036 15.8 1.0 2 23 1162 1184 1161 1184 0.95

16 21 0.0054 0.49 12.3 0.5 1 23 1205 1227 1205 1227 0.91

17 21 0.72 64 5.6 0.1 1 23 1278 1301 1278 1301 0.94

18 21 0.011 0.95 11.4 1.3 2 23 1312 1333 1312 1333 0.97

19 21 0.00091 0.081 14.7 1.4 1 23 1374 1397 1374 1397 0.95

20 21 0.00025 0.022 16.5 0.5 3 23 1407 1427 1405 1427 0.98

21 21 0.00082 0.073 14.9 0.9 1 23 1454 1477 1454 1477 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00019	0.017	16.9	0.4	2	23	184	206	183	206	0.96
2	21	2.3	2e+02	4.0	5.5	1	21	490	510	490	511	0.94
3	21	4.1	3.7e+02	3.2	6.6	1	23	540	563	540	563	0.96
4	21	3.5	3.1e+02	3.5	0.9	1	19	596	614	596	619	0.90
5	21	0.0003	0.027	16.2	1.0	2	23	709	730	708	730	0.98
6	21	0.52	47	6.1	0.1	1	23	753	775	753	775	0.90
7	21	0.00038	0.034	15.9	0.3	2	23	779	800	778	800	0.96
8	21	0.00057	0.051	15.4	1.3	2	23	835	857	834	857	0.96
9	21	0.56	50	6.0	0.2	2	23	902	924	901	924	0.94
10	21	0.0047	0.42	12.5	0.6	2	23	937	958	936	958	0.97
11	21	0.025	2.3	10.2	1.3	2	23	972	993	971	993	0.97
12	21	0.00058	0.052	15.3	4.6	1	23	1035	1057	1035	1057	0.98
13	21	0.63	56	5.8	0.3	2	22	1077	1097	1076	1099	0.88
14	21	0.0015	0.14	14.0	0.1	1	23	1125	1147	1125	1147	0.97
15	21	0.0004	0.036	15.8	1.0	2	23	1162	1184	1161	1184	0.95
16	21	0.0054	0.49	12.3	0.5	1	23	1205	1227	1205	1227	0.91
17	21	0.72	64	5.6	0.1	1	23	1278	1301	1278	1301	0.94
18	21	0.011	0.95	11.4	1.3	2	23	1312	1333	1312	1333	0.97
19	21	0.00091	0.081	14.7	1.4	1	23	1374	1397	1374	1397	0.95
20	21	0.00025	0.022	16.5	0.5	3	23	1407	1427	1405	1427	0.98
21	21	0.00082	0.073	14.9	0.9	1	23	1454	1477	1454	1477	0.94

Sequence Information

Coding Sequence: ATGGCTGATACTCCAACAGACGTTCGGGCCGTTTGTAGGCTCTGTCTTTCGAGCAGGAAAGACGCTTTGAAATCGATATTTAACGAGGAGCTCCGCCCGAATAAGCTTCCTCAAAAGATACGTCAATTAATTTTGATTCAGGTTGTCAGAAATGATAAATTATCCACTATGGTGTGTAACGATTGCATTATTAGACTCGACACTTGGTTTTCTTATAAGAAACAATGTCACAGAAACCAGGCAAAGTTGGCAGAATGGCTGAACAAATCTACCGGACAAAACGCTCTCGACGTGAGCGTTCATATAAAATCCGAACCTCTTGACATCGACTCGTACGGTAATGGACCTCTACCTTTCAAATTGGAGTATCCAGTGCACCCCGACATGATGGAAATGGAATTTAATGAATTCGATGACGACGACATGCGACCCGCGTTTCCGCAACACCCCCATAATTCCGAGCGTGTCTACTTGGAGGATTTGCAAAGGGCTGGAGCTGATGAATCAGAAGGTTCCATTGAAACTCTTTTAATTGCAGCAACCAGCCTAAAATGCCCAGAGTGTGGCAAAGCATTTGGTAGCGTGCAAAATCGTCGACGTCACCAAAACATGCAGCATAGGAAAGACAAAAGGGCCCAAATGATGGAAATTCGGAAGCCCCTACCAGAACCACCAGCTGAACCTCAGCCTGATAATAATTTGGAACAGAGCGTTGATAATGCGTCTGTCGAGACGTCGGATCAGCCACCTGATAATGCCGCTGATGAAAATTCAAAGCAGGCGATTGATAATCCTACTGACTATACTGAAGAAAATTTGGAAGAAACAACAAATGGTACGGCAGAACTCGATCCGGAGCAATTAACCGTCAGTAATTGCGAACAAAATACTGATAATAATGGTGTAGAAGATGCAGGTTTTACCGCAGAAAATATGAATAATTCTGAAATGGATGTTGAAACCAATACGACATTAGAAACATCTAAAGAAGGTTTAAGTGAAATCCCGACTGACACTGAAACAACATCAGACAATACGCCCCAAGAAGAAGTTAGTATTAAGGAGATTGACGAAAAACAGCCAGACACCATGGAAGACGCAAAAGATTCAGAAGATCGGGAAGAAATCAAGGAAAATTCGGCTGAAACGACAGAAACATCTAGCGAAGACCCAGTTGTAGAGAGACCTTCTAACGAAAACCAGAGTCAAGAAAATGAAAAACTTGTAGAGATAAACTACAACGATcaacaaaaaattgaatttgctGCCGGCCTGAAACTCGTGCAAAAAGATTCCACACACATAGAATTCGAACCTTTATCTAAAACTGAACTCAGTTACATTGAAAAATGCAAGGCCATGGTCTCCATGTTCCACAGCCTCCAATGTGCATGTCACAATGTACAACATAAATCTCTTCGCCACCTTCTGTCACATTTAAGGGAGATAAGGGTCTGGTTCCCGCTGTTCACTTGTTATAGCTGTATGATTTCTTTCACTGATAGATCTACTTTCACCAGACATCACTGTAGATGCCCCAAAAGTCAACTGGAGACTCTCATTAAACTATCTAATTTAAGGAAACGCAGTGAAATCAAAACGAGACTGTATCAAAACTATAGATGCAATAGGTGCAAGTTTTTGTACAGTTTTCATGAAGATTTTTGTAAACACATCAATGAAGACCACGACCCTGGTGCGCCACCTATCTATTGTTCGTGCAGGACCGTATTTGATTCGGTAGATGAATACAAGTCGCATTGTTATACATCCTGCGTCCTTTCGTACTACTGCGACATTTGTTTTATCACCACGGTCACGATTGATGAGTTCGTAAAACATTGTAATGAAGTCCATGACACGTCTGAAGGATTTGTTCTGCTCCAAGCGGACTCGTATACTCCTCGGGCTAGCTACAGTTATCGCCAGAAGGAAGTCGACGAGGACCATGTCGTCGAAGGCAAACGGGAACGTCGAAAATCTGCGAAAGAACCCATAATGGTGCACGTGTATGAGAAGGATATTCAGCCGGAACTCAAGGATATACCGACTAGAATAGTAAGACAGTTGGTAAAACTCGACTTTACCCCGTCCACCGCCAGAGAATGGAATAAATCACCTACCAAATGTCCTTTGTGCCAAAAGGAATATTCCAATGTGAATAATATGGTACGACATTATCGAACCCACATCGAAAAACAAGAAGTAGAAATACCGTATCCACTGGAAGATGGAGAAGGGGAAAACGAAGATCTATATTCTTGTCCAGAGTGCGGCGGGATGTATCCAGCGTCGAAATGGAAGAAACACATTGAAGACAAACATCAACCTGTCAGCTGCATGGAGTGCGATAAAGTATTCCAGTTTCAGAGCGAGTTAGAGCAACATAGAAGTGTCCATTTGAACCTCAAAGTATACAGGGATTCCAAAACGCATTCGTATAAAACGGCCGTTATAAGTCCAGGAGCTGAAACCAACGGTATCGTCGGCGGAATTATGGTGATGTGTGAAATTTGTGACAGTATGTTTAAGAGCAAAGAGGAACTGAAGCATCATAAATTAACTGAACATGACCTTAGCAGTATGTCTCGTGCGAGTAGCTCCATGGAAAACTTCGACATAAAAGAGGAAAAATCCCATATAAAGGATGACGAAGACGCAATGGAGTCGAAGACAGCTGACTATTCGCTAGAAGGAAAGCTACCGTGCGAATATTGCAGTAATCTATACGCCAGTGCAAAAAGTCTTAGGGATCACGTCATGAATAAACATGGGGCGGACTTTATTAAAAAGAGCGAGTACCCCAAGAAGTGCGAGTACTGCGACAAGGTGTGTACCACGGGGGCAGGTCTAGCCCTCCACACACAAGTTCACGAACGATGCAACCCGGATAAGAGAAGCGAATTTCCCAAAAAGTGCGAATACTGCGATAAAATATGTACAACTGGAGCGGGCCTGTACCTCCACACCCAGATGCACGAAAGAATGACTTTGGGCGATGTAAAGAAGGAAAAAACAGCGTCCGTTAAAACAGGGGCCATTAAATCGGAGGTTATTAAAGAGATAAAGAAACAAGAAAGTAAAGAGGAAGAAGAGTCGTATCATACTTGTAAACGATGCTTTAAAGTGTTTGGTACTAAAGGCAAACTAAAGGATCACATGAAGAGCCACGGAATCCATTCCAGCAAGCCCGGGCCCAAACCGGGAATGAAAAAGAGTAGAAAAATTCATTGCGACCTTTGTCATATCGCCGTGGAGAATAACGATGCCTTGGCGAAGCACAAGGCAGACGAACACGGCGATGAACTTGATGGCATGCCAACTTTGAAAAACGAAATGGAACTAATGGACGAAGATAAGGCGTCTGTTGTTTACACCTGCGATGTTTGCGTGGAGACCTTCGAATCAAAAGTGGAACTGCAGGAGCACAAGGAAATTCACGATAAACCCAGCATAGTGGCAAAAACCAAAAATACtttaatttattgtaaataCTGTAAGATAGCTTTTAGTTCTATTAACGAACTGACCAAGCATATGCACGTAGAGCACGGTGAAAGTGCCAAACCGAAAATAACCAAAGATAAATCGGGCGAAAATGGTGACAAGCCCTTCAAATGCTCGATCTGTTCAAAGGGCTTTGCAACTCATGGAGCGATGACGGCCCATTTTGGCTGGCACAAGCGGTCCGGCAGCTCCCTCGAAGTTTCGGAGCAGTCCGAGAATACGCCTCACGGAACGGCGGCAGTGAAAATTGCTAAGAAAGCGAAACTGTTAAAGAAAGTCGCTCAGGCGGCAATTAATAAACAGGAACCGATCGAACCTCCCGAATTCCAGTGCACCACGTGTTTCATGGAGCTACCGAACGAGACCGCTTTGCAAATTCACGTCCTCGAGAAACATCAAGGTTTGGACTCGCTGATGCTGATACCGAGATGCGACACTTGCAATCAAGATTTCGTTACTCAAGAAGAATACGAAACGCACAAGCGTTTCCACGACTTCTTGATCAGACAAAAGAAACACGAGAACCAGCTTAAAAGTCAAGAGCTAATTCAAACGCCCATTATACAGAGCGTGCAGAGTGTCGCGGATTCGCCTCACAGTAGCCCCAAGCGGCATCCGTGCAGCTGGTGCTCGTCCGTATTCAGTCGAAGCGACACTTTAAATACTCACATTAAACAGAACCACAAGGAGCACGTTAAAACGGAATTTGGATGTACTCAGTGCGATAGGGTATTCGAGAAACAAAATTCGTTAACCATCCATCTTAAGGTACACGAAAAACAAAAGAATATCGCTGCAGTTAGTACGGTGGTCgttggtggtggtggtggtgtcGGCGCCGGTGGCAAAGTCTATTCTTGTTCGATCTGCAATCACGGTTTCAGTTATCCCAAAGACTTAAGAATGCATACGATTAACGCTCATCCTTTTTGA
Protein Sequence: MADTPTDVRAVCRLCLSSRKDALKSIFNEELRPNKLPQKIRQLILIQVVRNDKLSTMVCNDCIIRLDTWFSYKKQCHRNQAKLAEWLNKSTGQNALDVSVHIKSEPLDIDSYGNGPLPFKLEYPVHPDMMEMEFNEFDDDDMRPAFPQHPHNSERVYLEDLQRAGADESEGSIETLLIAATSLKCPECGKAFGSVQNRRRHQNMQHRKDKRAQMMEIRKPLPEPPAEPQPDNNLEQSVDNASVETSDQPPDNAADENSKQAIDNPTDYTEENLEETTNGTAELDPEQLTVSNCEQNTDNNGVEDAGFTAENMNNSEMDVETNTTLETSKEGLSEIPTDTETTSDNTPQEEVSIKEIDEKQPDTMEDAKDSEDREEIKENSAETTETSSEDPVVERPSNENQSQENEKLVEINYNDQQKIEFAAGLKLVQKDSTHIEFEPLSKTELSYIEKCKAMVSMFHSLQCACHNVQHKSLRHLLSHLREIRVWFPLFTCYSCMISFTDRSTFTRHHCRCPKSQLETLIKLSNLRKRSEIKTRLYQNYRCNRCKFLYSFHEDFCKHINEDHDPGAPPIYCSCRTVFDSVDEYKSHCYTSCVLSYYCDICFITTVTIDEFVKHCNEVHDTSEGFVLLQADSYTPRASYSYRQKEVDEDHVVEGKRERRKSAKEPIMVHVYEKDIQPELKDIPTRIVRQLVKLDFTPSTAREWNKSPTKCPLCQKEYSNVNNMVRHYRTHIEKQEVEIPYPLEDGEGENEDLYSCPECGGMYPASKWKKHIEDKHQPVSCMECDKVFQFQSELEQHRSVHLNLKVYRDSKTHSYKTAVISPGAETNGIVGGIMVMCEICDSMFKSKEELKHHKLTEHDLSSMSRASSSMENFDIKEEKSHIKDDEDAMESKTADYSLEGKLPCEYCSNLYASAKSLRDHVMNKHGADFIKKSEYPKKCEYCDKVCTTGAGLALHTQVHERCNPDKRSEFPKKCEYCDKICTTGAGLYLHTQMHERMTLGDVKKEKTASVKTGAIKSEVIKEIKKQESKEEEESYHTCKRCFKVFGTKGKLKDHMKSHGIHSSKPGPKPGMKKSRKIHCDLCHIAVENNDALAKHKADEHGDELDGMPTLKNEMELMDEDKASVVYTCDVCVETFESKVELQEHKEIHDKPSIVAKTKNTLIYCKYCKIAFSSINELTKHMHVEHGESAKPKITKDKSGENGDKPFKCSICSKGFATHGAMTAHFGWHKRSGSSLEVSEQSENTPHGTAAVKIAKKAKLLKKVAQAAINKQEPIEPPEFQCTTCFMELPNETALQIHVLEKHQGLDSLMLIPRCDTCNQDFVTQEEYETHKRFHDFLIRQKKHENQLKSQELIQTPIIQSVQSVADSPHSSPKRHPCSWCSSVFSRSDTLNTHIKQNHKEHVKTEFGCTQCDRVFEKQNSLTIHLKVHEKQKNIAAVSTVVVGGGGGVGAGGKVYSCSICNHGFSYPKDLRMHTINAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01239395;
90% Identity: -
80% Identity: -