Basic Information

Insect: Polydrusus pterygomalis
Gene Symbol: -
Assembly: GCA_963969555.1
Location: OZ018377.1:11477505-11488104[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.00016 0.03 16.9 0.4 2 23 173 195 172 195 0.96

2 21 2 3.6e+02 4.0 5.5 1 21 492 512 492 513 0.94

3 21 0.3 56 6.6 4.6 1 23 542 565 542 565 0.96

4 21 3 5.6e+02 3.4 0.9 1 19 598 616 598 621 0.90

5 21 0.00034 0.064 15.8 1.0 2 23 710 731 709 731 0.98

6 21 0.45 83 6.0 0.1 1 23 754 776 754 776 0.90

7 21 7.4e-05 0.014 17.9 0.4 2 23 780 801 779 801 0.96

8 21 8.8e-05 0.016 17.7 1.8 2 23 836 858 835 858 0.96

9 21 0.067 12 8.6 0.1 2 23 902 924 901 924 0.94

10 21 0.0041 0.76 12.5 0.6 2 23 937 958 936 958 0.97

11 21 0.022 4 10.2 1.3 2 23 972 993 971 993 0.97

12 21 0.0005 0.093 15.3 4.6 1 23 1035 1057 1035 1057 0.98

13 21 0.16 30 7.4 0.8 2 23 1077 1099 1076 1099 0.91

14 21 0.0028 0.52 13.0 0.2 1 23 1124 1146 1124 1146 0.97

15 21 0.00035 0.064 15.8 1.0 2 23 1161 1183 1160 1183 0.95

16 21 0.0047 0.87 12.3 0.5 1 23 1204 1226 1204 1226 0.91

17 21 5.2 9.6e+02 2.7 0.1 1 23 1277 1300 1277 1300 0.93

18 21 0.0059 1.1 12.0 1.3 2 23 1311 1332 1311 1332 0.97

19 21 0.00015 0.028 17.0 1.4 1 23 1378 1401 1378 1401 0.96

20 21 2e-05 0.0037 19.7 0.7 1 23 1409 1431 1409 1431 0.98

21 21 0.0017 0.31 13.7 0.3 1 23 1461 1484 1461 1484 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.00016	0.03	16.9	0.4	2	23	173	195	172	195	0.96
2	21	2	3.6e+02	4.0	5.5	1	21	492	512	492	513	0.94
3	21	0.3	56	6.6	4.6	1	23	542	565	542	565	0.96
4	21	3	5.6e+02	3.4	0.9	1	19	598	616	598	621	0.90
5	21	0.00034	0.064	15.8	1.0	2	23	710	731	709	731	0.98
6	21	0.45	83	6.0	0.1	1	23	754	776	754	776	0.90
7	21	7.4e-05	0.014	17.9	0.4	2	23	780	801	779	801	0.96
8	21	8.8e-05	0.016	17.7	1.8	2	23	836	858	835	858	0.96
9	21	0.067	12	8.6	0.1	2	23	902	924	901	924	0.94
10	21	0.0041	0.76	12.5	0.6	2	23	937	958	936	958	0.97
11	21	0.022	4	10.2	1.3	2	23	972	993	971	993	0.97
12	21	0.0005	0.093	15.3	4.6	1	23	1035	1057	1035	1057	0.98
13	21	0.16	30	7.4	0.8	2	23	1077	1099	1076	1099	0.91
14	21	0.0028	0.52	13.0	0.2	1	23	1124	1146	1124	1146	0.97
15	21	0.00035	0.064	15.8	1.0	2	23	1161	1183	1160	1183	0.95
16	21	0.0047	0.87	12.3	0.5	1	23	1204	1226	1204	1226	0.91
17	21	5.2	9.6e+02	2.7	0.1	1	23	1277	1300	1277	1300	0.93
18	21	0.0059	1.1	12.0	1.3	2	23	1311	1332	1311	1332	0.97
19	21	0.00015	0.028	17.0	1.4	1	23	1378	1401	1378	1401	0.96
20	21	2e-05	0.0037	19.7	0.7	1	23	1409	1431	1409	1431	0.98
21	21	0.0017	0.31	13.7	0.3	1	23	1461	1484	1461	1484	0.94

Sequence Information

Coding Sequence: ATGGCTGAGACTCCTGCGGATATTCAAGCCGTTTGCAGGCTCTGTCTTTTTAGCAGGAAAGACGCTTTGAAATCGATATTTGACGGGGAGCTCGAGCCTAATAAGCTTCCTCAAAAGATACGGGATCTAATTCTGATTCAGGTTACCAGAAATGACAAACTACCCACCATGGTATGTAATGACTGCATCATCAGACTTGATACTTGGTTTTCCTATAAAAAGCAATGTCACAGAAACCAGACTAAATTGGCAGAATGGCTGAGCAAAACTACTGGACAAAACGTGCTTGACgcgGGCATTCATATAAAATCTGAACCACTTGATATTGACTCATCGCGTCATGGACTGCTACCTTTAAAAATGGAGTATCCCGTGAACCCGGACATGATGGACGTAGAATTTAATGAATTCGACGACGACGAATTGAGGCATCCTCCATACCCTCACAATTCGGACCATGTCTACTTGGAGGATTTACAAAGGGCCGGAATGGAGGAATCAGAAGCAACTAGCCTAAAATGCCCGGAATGTGGAAAGGCATTCGGTAGCGTACAAAACCGTCGACGTCACCAAAACATGCAGCATAGGAAAGACAAAAGAGCACAAATGATGGAAATTAGAAAGCCGCCACCAGAACTACAGACTGAACCAACAGCTGAACCTCAGCCGGATGACAATTCTGAACAGACCATTAAGAGTACTGTAGAAACTTCTGACCGGCCATCTGGCAATGCTGCTGATGAAGCGTCGACGCAGGCGACTGTAGAAACTTCTGACCGGTCATCTGGCAATGCTGCTGATGAAGCGTCGACGCAGGTGACCAGTAACACAGAGTCTACTAAACAAAATTCTGAGCAAACCAATGTTACCGTAGAATGCAATTTAGAGCAAGCTATTGTTAGTAATGGTGAACACAATTCTGATACTGGTGTAGGAGATAAAGATTTTACCTCACAAAGTAGCAATACGGACATGGATACTACCTGTCTTGAAACGACTGCAGAAACATCCAAAGAAGatTTGACTGAAACAGTATCAGAAAAGTCTCAAGAAGAATGCAGTATTAAAGATAACGACGAAGAAACGCCAGGAAACATGGAAGACCCCCCAAAAAAAGAAGAACCAAACGAAAACCAGGAAAAATCGGTAGAAACAGCAGAGACTCCCAAAGAAAACTCATTTGAAGAAAAATCTTCTAATGAAAACCCAAATCAACAAAATGAGAAACCCGACGTGTCAAACGACAATGACCaacaaaaaattgaatttgCTGCTGGACTAAAACTCGTGCAAAAGGATTCCACGCACATAGAATTTGAACCTTTATCGAAAACTGAACTTAGTTACATCGAAAAATGCAAGGCCATGGTTTCCATGTTTCACAGCCTTCAATGTGCATGTCATAATGTACAGCACAAATCTCTTCGTCACCTTCTGTCACATTTACGGGAAATCAGGGTCTGGTTTCCGCTCTTCACCTGTTATAGCTGTATGATTTCTTTTACCGACAGATCTACTTTTACCAGACATCACTGTAGATGCCCCAAAAGCCAACTGGAGACTCTTATCAAGCTATCTAATTTAAGGAAGCGAAGCGAAATCAAAACAAGATTATATCAAAACTACAAGTGCAATAGgtgtaaatttttatacagttttcATGAAGATTTTCGCAAACATATTAATGAGGACCATGACCCTGGGGCGCCACCTATTTATTGTTCTTGTAGGACCGTATTTGAGTCTGTAGATGAATACAAGACTCACTGTTACACTTCTTGCGTTCTTTCGTATTATTGCGACATTTGTTTTATAACTACAGTTACCATTGATGAATTCGTAAAACATTGTCAGGAAGTCCACGACACTTCTGAGGGATTTGTCCTGCTTCAGGTTGACACTTATACACCACGGGCTAGCTATAGTTATCGCAAGGAGGTTGATGAAGAACATGTCCTTGAAGGCAAAAGGGAACGTAGAAAGTCGGCCAAGGAACCCATAATGGTACATGTGTACGATAATGAAATTCCTCCAGACCTTAAAGACATACCAACCAGAGTAGTAAGACAATTAGTTAAACTCGACTTTACGCCCACCACTGCTAGTGAATGGAATAAATCGCCCACAAAGTGTCCTTTGTGCCAAAAAGAATATTCCAGTGTAAATAATATGGTAAGACACTATCGAACTCACATCGAAAAACAAGAAGTAGAAATACCATTTCCAATTGATGACGGAGAAGGGGGAAATGAAGATTTATATTCTTGTCCGGAATGTGGAGGGATGTATCCCGCGTCCAAATGGAAGAAACATATCGAAGACAAACATCAACCTGTAAGTTGCACGGAGTGCGACAAAGTTTTTCAGTTTCAGAGTGAGTTAGAGCAACATAGAAGTGTCCATTTGAACCTCAAAGTGTACAGAGACTCTAAAACACATTCATATAGAACAGCCGTTATAAGTCCCGGCGCTGAAACGAATGGTATTGTCGGCGGAGTTATGGTGATGTGTGAAATATGTGACACCATGTTTAAGAGCAAAGAAGAACTGAAGCATCATAAACTAACTCAACATGATAGTAGCAATATGTCTCATGCTAGTAGCTCCGTGGAAAACTTTGAGGAGGAGAAATTCAATGTAAAAGATGACAGTTCAGTAGATTCCAAAGGTGCCGTTACTGACCATTTACTTGATGGAAAAATACCTTGCGATTATTGTGGTAATCTATACGCCAGTGCGAAAAGTCTCAGAGATCACGTCATGAATAAGCATGGAGCCGACTTTTTAAAGAAGAGCGAATACCCCAAGAAGTGCGAGTACTGCGACAAGGTTTGCACCACAGGGGCAGGTCTGGCCCTCCACACACAAGTTCACGAAAGGTATAGCCCTGATAAAAAGAGCGAGTTTCCCAAAAAATGTGAGTACTGCGATAAAATATGTACAACCGGGGCAGGTCTGTACTTACACACCCAAATGCACGAAAGAATGACTTTGGGTGATGTAAAAAAGGAAAAACCTGTTGCAGGTAAAACACCGGCTACTAAATCGGAGGTGATTAAGGAGATAAAAAAACAGGAAAATAAAGAGGAAGAAGAGTCTTACCATACTTGCAAGCGATGCTTCAAGGTCTTTGGTACTAAAGGTAAACTAAAGGATCATATGAAGAGCCATGGTATCCATTCCAGTAAGCCTGGTCCCAAAACCGGATTAAAAAAGAGTCGAAAAATTCACTGTGACCTTTGCCACATCGCAGTGGAAAATAATAGTGCATTGATGAAGCACAAGTCGGAGGAACACAGCGATGAACTTGATGGAATGCCAACCTTGAAAAATGAAATGGAAGCCGAGGAAGATAAATCAGTTGTTGTTTACACTTGCGACATTTGCGTGGAGACGTTTGATTCAAAACTCGAACTTCAAGAGCATAAGGAGATTCACGATAAACCGAATATCGTGGCAAAGGccagaaatgctttaatttattgtaaatattgtaAGATTGCTTTTAGCTCTATTAATGAACTGACCAAACATATGCATGTAGAACACGGTGAAAGTGCCAAACCCAAAGTAACCAAAGAAAAATCAGGACCAAATGGTGACAAATCTTTTAAGTGCTCAATATGTTCGAAAGGCTTCGCCACTCATGGGGCTATGACAGCCCATTTTGGTTGGCACAAGCGGTCTGGTAACACCCTGGATACGCATGAGCAGTCCGAGAATACACCGCAAGGTGCGGCAGACGGAAAAATGGCAAGGAAAGCAAAACTGTTAAAGAAAGTGGCCCAGGCTGCAGTTAATAAGCAAGAACCGATTGAACCTCCCGAATTTCAATGTACCGCGTGTTTCATGGAGCTACCAAATGAAACTGCATTGCAAATTCACGTACTTGAGAAGCATCGCGGTTTGGATTCGCTCATGCTTATACCACGTTGCGATACTTGCAACCAAGATTTCGTAACCCAAGACGAATACGAAACACATAAACGTTTCCACGACTTTTTAAGTCGTCAAAAGAAACACGAGGCACAGCTTAAGAGTCAACAAAGTCCGGCGCAAGACCTAATTCAAACACCTATTATACAGAGCGTGCAAAGCGTGGCAGATTCCCCTCACAGTAGCCCCAAACGGCATCAGTGTAGTTGGTGTCCCTCTGTCTTCAGTAGGAGCGACACTTTAAATACTCACATTAAACAGAACCATAAAGAACATGTTAAAACAGAGTTTGAATGCACGCAATGTGATAGGGTCTTTGAGAAACAAAATTCGTTAACTATCCATCTGAAGGTACacgaaaaacaaaagaatgcCGCCACCGTTAGTGCAGCTCTAGTTGGAGGTGGTGGTGGTAGTGCTGGTGGTAGTGCTGGTGGTAAAGTTTATTCTTGTTCGATCTGCAGTACAGGTTTCAGTTTTCCGAAAGACTTAAGAATGCACACCATTAACGCCCATCCTTTTTGA
Protein Sequence: MAETPADIQAVCRLCLFSRKDALKSIFDGELEPNKLPQKIRDLILIQVTRNDKLPTMVCNDCIIRLDTWFSYKKQCHRNQTKLAEWLSKTTGQNVLDAGIHIKSEPLDIDSSRHGLLPLKMEYPVNPDMMDVEFNEFDDDELRHPPYPHNSDHVYLEDLQRAGMEESEATSLKCPECGKAFGSVQNRRRHQNMQHRKDKRAQMMEIRKPPPELQTEPTAEPQPDDNSEQTIKSTVETSDRPSGNAADEASTQATVETSDRSSGNAADEASTQVTSNTESTKQNSEQTNVTVECNLEQAIVSNGEHNSDTGVGDKDFTSQSSNTDMDTTCLETTAETSKEDLTETVSEKSQEECSIKDNDEETPGNMEDPPKKEEPNENQEKSVETAETPKENSFEEKSSNENPNQQNEKPDVSNDNDQQKIEFAAGLKLVQKDSTHIEFEPLSKTELSYIEKCKAMVSMFHSLQCACHNVQHKSLRHLLSHLREIRVWFPLFTCYSCMISFTDRSTFTRHHCRCPKSQLETLIKLSNLRKRSEIKTRLYQNYKCNRCKFLYSFHEDFRKHINEDHDPGAPPIYCSCRTVFESVDEYKTHCYTSCVLSYYCDICFITTVTIDEFVKHCQEVHDTSEGFVLLQVDTYTPRASYSYRKEVDEEHVLEGKRERRKSAKEPIMVHVYDNEIPPDLKDIPTRVVRQLVKLDFTPTTASEWNKSPTKCPLCQKEYSSVNNMVRHYRTHIEKQEVEIPFPIDDGEGGNEDLYSCPECGGMYPASKWKKHIEDKHQPVSCTECDKVFQFQSELEQHRSVHLNLKVYRDSKTHSYRTAVISPGAETNGIVGGVMVMCEICDTMFKSKEELKHHKLTQHDSSNMSHASSSVENFEEEKFNVKDDSSVDSKGAVTDHLLDGKIPCDYCGNLYASAKSLRDHVMNKHGADFLKKSEYPKKCEYCDKVCTTGAGLALHTQVHERYSPDKKSEFPKKCEYCDKICTTGAGLYLHTQMHERMTLGDVKKEKPVAGKTPATKSEVIKEIKKQENKEEEESYHTCKRCFKVFGTKGKLKDHMKSHGIHSSKPGPKTGLKKSRKIHCDLCHIAVENNSALMKHKSEEHSDELDGMPTLKNEMEAEEDKSVVVYTCDICVETFDSKLELQEHKEIHDKPNIVAKARNALIYCKYCKIAFSSINELTKHMHVEHGESAKPKVTKEKSGPNGDKSFKCSICSKGFATHGAMTAHFGWHKRSGNTLDTHEQSENTPQGAADGKMARKAKLLKKVAQAAVNKQEPIEPPEFQCTACFMELPNETALQIHVLEKHRGLDSLMLIPRCDTCNQDFVTQDEYETHKRFHDFLSRQKKHEAQLKSQQSPAQDLIQTPIIQSVQSVADSPHSSPKRHQCSWCPSVFSRSDTLNTHIKQNHKEHVKTEFECTQCDRVFEKQNSLTIHLKVHEKQKNAATVSAALVGGGGGSAGGSAGGKVYSCSICSTGFSFPKDLRMHTINAHPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01239395;
90% Identity: -
80% Identity: -