Basic Information

Insect: Pollenia labialis
Gene Symbol: RREB1
Assembly: GCA_949318255.1
Location: OX439142.1:106193833-106199915[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.028 3.9 9.6 1.7 1 21 233 253 233 255 0.95

2 13 0.00048 0.067 15.2 0.2 1 23 265 287 265 287 0.98

3 13 3.4e-05 0.0046 18.8 7.5 1 23 293 315 293 315 0.98

4 13 2.5 3.4e+02 3.5 0.0 1 23 539 563 539 563 0.82

5 13 5.8 8.1e+02 2.3 3.1 2 20 569 587 569 588 0.93

6 13 0.054 7.5 8.7 0.1 1 23 728 750 728 750 0.97

7 13 1.6e-05 0.0023 19.8 1.2 1 23 760 782 760 782 0.99

8 13 0.0012 0.16 13.9 2.0 1 23 788 811 788 811 0.97

9 13 0.0043 0.59 12.2 2.0 1 23 1163 1186 1163 1186 0.95

10 13 0.00026 0.036 16.0 1.0 3 23 1524 1544 1522 1544 0.97

11 13 0.21 29 6.9 6.3 1 23 1550 1573 1550 1573 0.97

12 13 0.12 17 7.6 1.1 3 23 1750 1770 1749 1770 0.91

13 13 0.0014 0.2 13.7 5.7 1 23 1776 1798 1776 1798 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.028	3.9	9.6	1.7	1	21	233	253	233	255	0.95
2	13	0.00048	0.067	15.2	0.2	1	23	265	287	265	287	0.98
3	13	3.4e-05	0.0046	18.8	7.5	1	23	293	315	293	315	0.98
4	13	2.5	3.4e+02	3.5	0.0	1	23	539	563	539	563	0.82
5	13	5.8	8.1e+02	2.3	3.1	2	20	569	587	569	588	0.93
6	13	0.054	7.5	8.7	0.1	1	23	728	750	728	750	0.97
7	13	1.6e-05	0.0023	19.8	1.2	1	23	760	782	760	782	0.99
8	13	0.0012	0.16	13.9	2.0	1	23	788	811	788	811	0.97
9	13	0.0043	0.59	12.2	2.0	1	23	1163	1186	1163	1186	0.95
10	13	0.00026	0.036	16.0	1.0	3	23	1524	1544	1522	1544	0.97
11	13	0.21	29	6.9	6.3	1	23	1550	1573	1550	1573	0.97
12	13	0.12	17	7.6	1.1	3	23	1750	1770	1749	1770	0.91
13	13	0.0014	0.2	13.7	5.7	1	23	1776	1798	1776	1798	0.99

Sequence Information

Coding Sequence: atgttaGTCGCAACAAATGCCCAACAAACAGCCCAAAACAGTCCCAAAACCACAAGAGCTAATACGCCTATTAAAATGGAAAGAAGAGATTCCACTTCATCATATTCCTCATTGGAAGACTTGGAACACAATGGTAAGAAACTGAATGCCGTAACCTCTACGCCGCTAGTGACAAGTGATGCTACAGTTTCTTGTGGTTTAAGTTCTATAACTGGTGCAACAGAACGAACGATTCAGAGGCCGGCAACAATAATtcagcaaaatattttgcatcagCGTATGCAGGAATCCGATGAGACTAACGATTATGATGAAGACGAATCGGCTGATGAAAAATCTTTACAATCTCGCCAGCAATTGCACTATAAGCGCCGTCTAAGCGGCCGCAGCCTTGCGGATAAAGCAACAAGCTATTTGATAGAATATAATGCTAATAATCCAAATAGTTTGCGCAAAAAATTTCGTTCAAATCGCTTGGTACTTAACAACGGCGATGAATCGGGTTTCGTTGATACCAGCCACAACAGTCAATTGACGAATACCACAACATCTATATCGTTGGCTGCTGAAGCAACAAATCAACCAAGCTCGAATAATAATTCCAAAACGAATAGTTCTTCGGATACCTCTTCGCCGCCACAAAGCAATGGTAACTCTAGTCCTGAATCGGGTATTGGAGAACGGGAGGATATGAAATATATGTGTCCCATTTGCGACGCAGTTTCACAGACGGCCCATCAATTTACCAACCATATACGTTGTCACAATTACGCCTCAGGTCATACGGAGAATTTTACCTGCCGTATATGCTCTAAGGTGTTATCATCTGCCTCATCATTGGATCGCCATGTTCTAGTTCATACGGGAGAAAGACcatttaattgtaaatattgtCATCTTACATTTACCACCAATGGAAATATGCATCGTCATATGCGTACTCACAAACAGCATCAGCATACTCATCATAGACGTAACTCGAATGGAACAAAGTTCAAcacaaacaacagcaacaacaacaacaacaacaataattatAGCAGTAGtaataacaacaacacaacCACAACAgctgtaaataaaacaacattaaGCAATGGACAATTAAGTGAAGGCGTTAAATTATCAACAACAGCAGACTTAACATCgacaacaaaaacagcaacaacaacagtaatACCAACATCGCCAGCAGCAGCGACCCCAAAAGCAGTTGACGCTACTGACAATGATAATAATCAAAAGCCAACAACAGGTGCTAATAGCGAACGATTAAATGGTAACGCCAACTTAGAAAGCTATGAAAGCGATGGTGGCTGCTCATCAGATTCATCAGCGGGTCGTgtttataacaacaacaaaaacaacaacagcaacaataatgacaaacaaaatgaaaataataacaataatgatttgaaaattaacaataataactaTAAACGCAAACATAGTGATGATCAGCCATCGCATAATGTACTAGACTCTGTAGAAAGCACCCATGATCTACTCAAGCGCCGTTTAAGACCAGACTCCAGTAAGTCCCCTAACATCGCAACAAACAACCATAATGATgtgttaaatccaacaacaacaacaacaacaagagagTCATTCGTTTGTCCCGTTTGCAACGAAAGTGATTTTCCGGATAATCAGGCTCTAGATCAGCACATCGATAGCAAGCATCCAAAAATTCCTGCCAAATGTAAACATTGTGGTGTGATTTATCTAACCCAGCATCAATTTAATATACACGTCTGTCCTGCCGATATCAAGGGTTCCATGAATTTGTCGATAAAACAGCGCCGTTTAAGTGAAAATTCCAATCATCACGTGGAAGAGACCCGTGAGGACTTAGAAGAGAATGTCAGGCAAAGACATGAActatttcaacattttaaaaatgttatagcCCAAAGCAATTCCCCTTCATCACATTTCAATCAAGATCTAACAGAAGATGATATTAAATCTGAACCATCAGCTCATGACTCCAAGGATTTGGCTGATAtacaatcaattttaaatatgacagcTTCTTCGAGTAATTCAAATTTACTCCGGAACTTTGAACAATCTGTAAATACACCTTCCTCACAGTACAGTTATGACAGAGATGAAGAAGAAGCTCAAGATGCTTTCACTTCAGAATTCCGTAAAATGAAATTGCGTGGTGAATTTCCCTGTAAACTCTGTACGGCAGTATATCCTAATTTACGAGCTCTTAAAGGTCATAATCGTGTTCATTTAAGTGAGGTCGGCCCTGCAGGTCCTTTCCGTTGCAACATGTGTCCTTACTCGATATGTGACAAAGCGGCCCTAATTCGCCATATGCGTACTCACAATGGAGATCGTCCCTACGAGTGTGCTGTTTGCAACTATGCCTTTACCACCAAAGCCAATTGTGAAAGACATTTGCGCAATCGTCATGCAAAAACTACTCGGGAGGAGGTAAAACGTGCCATTATTTATCATCCTTCAGAAGATTCGTCCTGTGAAGACACTACCAAAAAGTTGCATATGTTCTCATCCGAATTTGAAGAAGATTGCGATTTAATGTCTTATCACCAACATCAACCCAAAGATCGTTCGACTCCCGTATCACATCTCAAGGAGAGATTAACTTCTGGCGATAGTCCATCTTCCAAACCTGTTAAGATTCAAGTGAAAAGCCTTGAAGATTTGTTGGATAAATCAACTGCTTCATCTGGTTATCATGATAGCTACGATAAACGTAATATTGATATCTCAGAAGCCCCAATTGATATGAGCATGGATGTTTTGGACTTGAGTAAGAAACCTAGTGCTCCACAGCCTCCAGTTCAAGAAGAAAAGGTGGAATCATCCCTACCATTGTTGCCATTACCCAAACCAGATGCTAATATCAGTAATGAAATGCTCAAAAACAAAATAGCTCCTACGGAAGCGGATCCAAAATTAGATATATCAGCCTTGGATAAACAACACCAACAATTGCTTTTGGCTCAGCAGCAATTACTCAGTGATCCAAATCAACTAATGCAGCAattgtatagaaatttattgtttcCTCAATTTCCTCCCTTCTTTATGCCCAACACTTTTATGAATACTAACTTTGCAGATTTTCAAAAACTCGCGCCTCTTCTGACTCGTATGATGGGTGGAGTTGCAGCAGCAACATTGCCAAACAACGATATTGAAAAACCATCTACATTAACGCCGTTGAATCCTAATAGCGCCCCCAGTGTCCCACAAATGAGCCCTTTGATAAATGAAAAACCTAACTCTACAACGTTGGCTTCAATGTCATCACCTAAAAATCTACTTTCGCCAAATCCAAATCATTTGCCAATGCCTAGACATATTATGCCCACTTCAGTATCATCACATTCTCCAAATCTGCCACCAACAATGCTTTCAAATGGTCCTGTCAAGATGGTGCTCAAAAACGGTGTATTCATgcccaaacaaaaacaaagacgTTACCGTACTGAACGTCCATTTGCTTGTGAACATTGTTCAGCTCGTTTTACTTTACGTTCCAATATGGAACGTCATGTAAAGCAACAACATCCCCAATTCTATGCCCAACGTCAACGTAGTGGACATCATGTTATGCGTGGTCGGGGAGCCAGTAGTGCTGCTAATATAAATAGCATCTCCCATTTGCAAGCTGTAGCCCAAGCTCATTATAGTTCTGCTCCACCCACGATAAGTTCACATTCTCCCATTTCCGATCAGGTGAAATGTGCCATATTGGCACAACAACTTAAAGCTCGCAAAGACACCGATCTGCTACAACAAGCCTTAGCTCATGGATCCAACAGTGTAGCTAATTCAAATATGTTTTCTCCGCAAGGTTCCAATCTTAGCAATGGACAAACACCTTTTTTTGGTTTCAACCCCCATCATAGTCATCACCTTAGTCAAAACGGCACACCAAATGGTTCCATGGAAGATGATGAACCAAAATTAATCATTGACGAAGATGATGAGGAAGAAGAAGAGGATGAAGAGGACATTGAAGAAATTCCCGATGAACAAGAAGAAGATGAAGAACatgatttagttttaaatgaaagcCAGTATAAATCGGAAAGCCATAATTTACCCACAACTGTTGAAGAAGTTAAGCTGAAATCAGACAAGCCGCCGGAGTCAGCCAAAAAAGTAGCTGAATCCATATTGGAGCAAGCGATTAAAGCCAGGCAAAATGTGCATTCTTTTGCTAAAACATCGGAACCTTCTATGGTAACTCCCAATAATAACACGATGAAATCCATGATTGCTCAAGCTCCAGCAGTGggtaaatttttgaaagaagTGGCAAGCTCTTCATTCAAGGATGATTCCCAAGACTTAGTCTCAGTGTCTGAATTAGTAGATAATGCCACTAATAATGCGGTGTCTTTTAATAACTACTTTCGCCCCTCGGATGTTGCCAATCATATGGAACCCAGTGATGAAGATGGTTTGGTGGCCTCCTCTGCCAGTGAAAGTAACAATTCGGGAGCGGAAGATACTGTGAGCattgaaaaaccaaaaaagaagtCAGCCTATAGTTTGGCACCCAATCGAGTTCATTGTCCTTACTGTCAACGAATGTTCCCTTGGTCCAGTTCCTTAAGAAGACATATTCTCACACATACAGGTCAAAAACCTTTTAAGTGCTCTCACTGCCCGCTTTTGTTTACCACTAAAAGTAATTGTGATCGTCATCTTTTGCGCAAACATGGAGATGTTGAATCTGCTGTGTCAGTGTATGTACCAACTGAAGATGTTTCCGAGCCTATTCCATTGCCCAAGTCGGTGGAAGAAATTGAAAGGATGCAGAGAGAGCGTGACGAAGAAGAGCGTAAACGTAAAGCCGAAGAACAACGAGAACGTTTGGAGAAAGAACAAATGGAAAAGCAAAAATTTGAAcaggaacaacaacaaaaacaagcatTTCTTAAGCAATTAGCTGTAGCTCAATTTCAACagcaatttatacaaaaacccGAAGCTAATCCAGTTTCTTCTTCAGAACTACCTTTCAAATGTCATCTTTGCGAAAGTTCATTTGCTGAGCGTCTACAATGTTTGGAACACATTAAATCTTTGCATGCCCAAGAATTTGCTCTCTTGCTGTCGAAAGGAGCAATCGAAAATGAGGCTGACGCTGCTCAAATGACTTCCAATGAAGAAGATGAACGTCATCGGTGTAATGAAGATTCTGCCAAAGGAGGCAAGTATCCTGACTACAGTAATCGTAAAGTCATCTGTGCTTTTTGCATGAGACGTTTCTGGTCGACTGAAGATCTACGTAGACATATGCGTACCCACTCCGGCGAAAGACCTTTTCAATGTGAAATCTGCTTTAGAAAATTTACTCTGAAACATAGCATGCTCAGACACATGAAAAAACACAATGGCCTCCACATTAACGGTGCTCAATCCAACAATGATAATATGACCAATGGCAATTCTGGCTCTGATTATTCGGACGATGAACAAACTCCAAATTCCTTGCCTCCTCCTGCAATGCCAATACCAAACACTAGCATCGATGCTTTATTTATGGGCTCAAAATTCCAAGAACTACTTAACAAAGCGAACGAATGGAGAAATGGCAGCTTAAATGCTTTAAGGCAGGGCAAAGAAAACAAGTCCGAGGAAACAAATACACCACAATCATCGGATTTAATTGGTAACTTGTTGGGCATCAGTGATCAGGGtatattgaataaattaatgTCATCACCTGATGAGGCAGCCAAATTTTTGGGAGTTGAAAAGTGA
Protein Sequence: MLVATNAQQTAQNSPKTTRANTPIKMERRDSTSSYSSLEDLEHNGKKLNAVTSTPLVTSDATVSCGLSSITGATERTIQRPATIIQQNILHQRMQESDETNDYDEDESADEKSLQSRQQLHYKRRLSGRSLADKATSYLIEYNANNPNSLRKKFRSNRLVLNNGDESGFVDTSHNSQLTNTTTSISLAAEATNQPSSNNNSKTNSSSDTSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNTNNSNNNNNNNNYSSSNNNNTTTTAVNKTTLSNGQLSEGVKLSTTADLTSTTKTATTTVIPTSPAAATPKAVDATDNDNNQKPTTGANSERLNGNANLESYESDGGCSSDSSAGRVYNNNKNNNSNNNDKQNENNNNNDLKINNNNYKRKHSDDQPSHNVLDSVESTHDLLKRRLRPDSSKSPNIATNNHNDVLNPTTTTTTRESFVCPVCNESDFPDNQALDQHIDSKHPKIPAKCKHCGVIYLTQHQFNIHVCPADIKGSMNLSIKQRRLSENSNHHVEETREDLEENVRQRHELFQHFKNVIAQSNSPSSHFNQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVYPNLRALKGHNRVHLSEVGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDTTKKLHMFSSEFEEDCDLMSYHQHQPKDRSTPVSHLKERLTSGDSPSSKPVKIQVKSLEDLLDKSTASSGYHDSYDKRNIDISEAPIDMSMDVLDLSKKPSAPQPPVQEEKVESSLPLLPLPKPDANISNEMLKNKIAPTEADPKLDISALDKQHQQLLLAQQQLLSDPNQLMQQLYRNLLFPQFPPFFMPNTFMNTNFADFQKLAPLLTRMMGGVAAATLPNNDIEKPSTLTPLNPNSAPSVPQMSPLINEKPNSTTLASMSSPKNLLSPNPNHLPMPRHIMPTSVSSHSPNLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANINSISHLQAVAQAHYSSAPPTISSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVANSNMFSPQGSNLSNGQTPFFGFNPHHSHHLSQNGTPNGSMEDDEPKLIIDEDDEEEEEDEEDIEEIPDEQEEDEEHDLVLNESQYKSESHNLPTTVEEVKLKSDKPPESAKKVAESILEQAIKARQNVHSFAKTSEPSMVTPNNNTMKSMIAQAPAVGKFLKEVASSSFKDDSQDLVSVSELVDNATNNAVSFNNYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSIEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQRERDEEERKRKAEEQRERLEKEQMEKQKFEQEQQQKQAFLKQLAVAQFQQQFIQKPEANPVSSSELPFKCHLCESSFAERLQCLEHIKSLHAQEFALLLSKGAIENEADAAQMTSNEEDERHRCNEDSAKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLHINGAQSNNDNMTNGNSGSDYSDDEQTPNSLPPPAMPIPNTSIDALFMGSKFQELLNKANEWRNGSLNALRQGKENKSEETNTPQSSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260066;
90% Identity: iTF_01237102; iTF_01236090;
80% Identity: -