Plab037315.1
Basic Information
- Insect
- Pollenia labialis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949318255.1
- Location
- OX439142.1:150165034-150202105[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1 5.2e+04 -13.3 26.5 60 167 26 146 2 168 0.58 2 5 1 5.2e+04 -8.8 12.5 22 78 128 189 127 230 0.60 3 5 0.15 7.7e+03 -2.6 5.6 21 89 199 276 192 284 0.49 4 5 3.2e-117 1.7e-112 377.2 26.9 1 299 319 615 319 616 0.94 5 5 0.067 3.5e+03 -1.5 3.7 220 245 644 669 619 690 0.47
Sequence Information
- Coding Sequence
- atggaTACTACAAGTGCCGTAGGTCGGCGTCGAGTTAATTCCCGTGTTAATGCCGAGGATCAAGCTTTGGATCAAATAGCAAAAGAGGAATCAAGGTATAGtaatagtagcagcagcaacaacaatgtTGAAGTAGCAAACGATGAAATCATCGAGGAGTTATTTGATTTTAGCGATACCGATTTAAAAGAACTCGAAgatacaaataacaaaaaaattaacagcaacaacaataccaACAACTCCAGTACTACTAACGATGACGAGCTTTTAACTAAAGATAGCGAtaacttaaaggaaaataatGAGGAAGTTGATAAAGAGTCAGAGGTGCAATTGCAAAATATAATAAgtgataataacaataataatcataataatgaaaaagaaaaacaagaagaagaacaacaacaacaacaacaggtgGTGGTGGAAGAATTGCTATCGTCGCCAATTGATAACATTgataaacaaaacaaagaagACAGAAAAGATAGCGAATTAGACATGACTGTGACACTAACAACGAACGCATCGGACGCGTCTACCGAAACTTCAAATATTGCTAGTGGCACAGAAGAAAATATAGATAATAAGGAATTTgataaaaaccaacaacaaatgtCACCAAAAGCAGAAGAAAGCAATGAAAACGATTCAAACAAGCATAAAACACTTCATAAAGAATCCAATACTATACCCGTGCAATTCTCTAACAGTTCCATTGTTAGCCCAGACTTAAACAGCAAAATGTCAACGTCTACAGACAGCCAGTTTATGACAATTAACACGGCTCCAGAGTCGTCTTCGTCTTTCGATGATAAGAAAAATAGTAGTTATTGTCAGAgagaagataataataataatgatgatggTGAGGGTGACGAAGATGATGAGTATGCCGAACCATATAATGAACTTTTAGTTCAATTCCTTGATGAAGCCAATCATATAgCTGAGGCTAGATTAGCTGCCAGAAGGCATGCCAGAGCAGAAGCTCGAGAAATACGCATGCGTGAATTGGAACGTCAGCAAAAAGAACAAGAATCCAATGCAGATCGTGTATTCGATATGCATTCAACTGTTACTGGTATTACGCCACTGTCACACATGCGTTTGGGCTTAGGGAGTTCTCCAGTTTCTGGTTTACTTAATTCAACTAGAGGCAACTCAATGTCTTCAAGACGCAGTAGTGAAGATTCTTTAGAAGAGGAAGGCCGCAGCTTAAGAGATATACGTCATGAGTTAAAGgatGTTGAAGAACGATTTCGCAAAGCTATGATAGCGAATGCTCAGTTGGATAATGATCGTGCCTCACAAACGTATCAAATACAGTTGCTTAAAGACAAGCTGGAAGATATGGAAGAATCATATTCACAATTGCAACGTGAGTGTAAGGAAAAGACACGCGATTGTAATGCCTTGAAACGATCGTTGGATAAATTAAGCGAAGAACTTAAACTAGTACAGGGTCAGCTGAATGAGCGTGATACGCTGATAGCAGAACAGGGATTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTAGATGTTcgacttaaaaaatttagcgaAGAGAAACAACAACTGCAGTCTGAAGTCCAGCAGTTGCAGGAACAGTTAGAAAACTATAAAAGTCAGGGCAAAGGACGTGGTAAAGGCAATTCTACAAATGGTCCCTTAGGTTCAGACGATGATGATTATGAAGCTCAAAGAGAAGCTAATAAAATCATATCggattataaatataaattgcaAAAAGCTGAACAGGAAATCGCTAGTCTACAATCAAGTTTAGCACGTTCTGAGACACAAGTTATTCGCTATAAAAGTACAGCTGAGGCGGCCGAAAAAGCTGAAGCCGAACTTAAAATCGAAAGGAGAAAACTGCAAAGAGAGAATCGAGAGGCAATGGAGAAACTCGAAGAGTTAGAAACATCAAATAATCATCTTCTGAAACGTTTGGATAAATTAAAGAATGCCAAAAGTGCTTTGCTTAAAGATCTCTGA
- Protein Sequence
- MDTTSAVGRRRVNSRVNAEDQALDQIAKEESRYSNSSSSNNNVEVANDEIIEELFDFSDTDLKELEDTNNKKINSNNNTNNSSTTNDDELLTKDSDNLKENNEEVDKESEVQLQNIISDNNNNNHNNEKEKQEEEQQQQQQVVVEELLSSPIDNIDKQNKEDRKDSELDMTVTLTTNASDASTETSNIASGTEENIDNKEFDKNQQQMSPKAEESNENDSNKHKTLHKESNTIPVQFSNSSIVSPDLNSKMSTSTDSQFMTINTAPESSSSFDDKKNSSYCQREDNNNNDDGEGDEDDEYAEPYNELLVQFLDEANHIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGSSPVSGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLQSEVQQLQEQLENYKSQGKGRGKGNSTNGPLGSDDDDYEAQREANKIISDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01235731;
- 90% Identity
- -
- 80% Identity
- -