Basic Information

Insect: Polistes metricus
Gene Symbol: -
Assembly: GCA_010416925.1
Location: QUOH01000013.1:1033070-1041778[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.011 0.77 10.0 6.4 1 23 204 227 204 227 0.95

2 16 4.6 3.1e+02 1.8 0.3 1 23 611 634 611 634 0.91

3 16 5.9 4.1e+02 1.4 2.9 3 23 633 660 632 660 0.83

4 16 0.13 8.8 6.7 3.5 2 23 666 687 665 687 0.97

5 16 0.0033 0.23 11.7 0.8 1 22 1032 1053 1032 1053 0.96

6 16 0.013 0.92 9.8 0.9 2 23 1061 1083 1061 1083 0.94

7 16 0.014 0.98 9.7 4.0 3 23 1095 1116 1093 1116 0.91

8 16 0.086 5.9 7.2 0.1 3 21 1146 1164 1144 1165 0.92

9 16 0.11 7.8 6.8 5.3 1 23 1172 1195 1172 1196 0.92

10 16 0.16 11 6.3 0.3 1 23 1206 1229 1206 1229 0.95

11 16 0.044 3 8.1 0.1 1 20 1251 1270 1251 1272 0.94

12 16 0.089 6.1 7.2 3.7 1 23 1279 1302 1279 1302 0.96

13 16 0.79 54 4.2 2.2 1 23 1311 1334 1311 1334 0.92

14 16 0.036 2.5 8.4 0.1 1 20 1389 1408 1389 1410 0.94

15 16 0.00018 0.013 15.6 1.0 1 23 1417 1439 1417 1439 0.96

16 16 6.2 4.3e+02 1.4 1.2 1 23 1449 1472 1449 1472 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.011	0.77	10.0	6.4	1	23	204	227	204	227	0.95
2	16	4.6	3.1e+02	1.8	0.3	1	23	611	634	611	634	0.91
3	16	5.9	4.1e+02	1.4	2.9	3	23	633	660	632	660	0.83
4	16	0.13	8.8	6.7	3.5	2	23	666	687	665	687	0.97
5	16	0.0033	0.23	11.7	0.8	1	22	1032	1053	1032	1053	0.96
6	16	0.013	0.92	9.8	0.9	2	23	1061	1083	1061	1083	0.94
7	16	0.014	0.98	9.7	4.0	3	23	1095	1116	1093	1116	0.91
8	16	0.086	5.9	7.2	0.1	3	21	1146	1164	1144	1165	0.92
9	16	0.11	7.8	6.8	5.3	1	23	1172	1195	1172	1196	0.92
10	16	0.16	11	6.3	0.3	1	23	1206	1229	1206	1229	0.95
11	16	0.044	3	8.1	0.1	1	20	1251	1270	1251	1272	0.94
12	16	0.089	6.1	7.2	3.7	1	23	1279	1302	1279	1302	0.96
13	16	0.79	54	4.2	2.2	1	23	1311	1334	1311	1334	0.92
14	16	0.036	2.5	8.4	0.1	1	20	1389	1408	1389	1410	0.94
15	16	0.00018	0.013	15.6	1.0	1	23	1417	1439	1417	1439	0.96
16	16	6.2	4.3e+02	1.4	1.2	1	23	1449	1472	1449	1472	0.88

Sequence Information

Coding Sequence: atgGCACGAATTCGTCAGTACTCAAGACCATTGGATCCTATAACTgctaaatttgatttttcacaAATTTCTACATTTAACAGAGAAAACATCATGATTAAACAAGAGCCATGTGATACGAACAACGTAAAGATGAATGAAAATTGTGTATCGACTAATATACAGTGCAAATATATCGACCTAACCAAGGATAATAGCAGTCAGCAAGAAGATGTTGTTTCTTCTACAACTGAAAATCTCAGTTACAATGTAATAACTAGTCAAATCAGAAAGGAACCTATTTTAATGGGTAATgcaataattgaaaataataaacatctACAGCAAATGGAACGTTCGTTTGTTATAGATGAAAGTAATGAAAATGTTGGGACGTTAGAAAAAAGtgacaatattaataaatttaaactacAAAAAAATGCAGCACAGTTACAGAATACGACAACTCAATGTAGCATATGTTTGTTGTCGTTCCCCAGTCAGcaaattttgaattttcatAATAGTTATTATGAAAgtactaatatttatttttgtcacaGTTGTGCTTCCAAATCTTGTTATCACATTAAAGAGCAAAATAGTAAGAAGACGTATTACTATAACATGTATGAATGCGATGTTTGTAAAAACCGGTTTAAGCATAAGGAACATATGCAAGCTCATTTACTCCATTaccacaaaaaagaaataaataggatGAATGTcgtagaaaatgataaaattatgattaatcaTTCGACTGTTTCACAATCCATTACCCCAATCAAGGATAAATTGATACAACAAAAAAGGGAcaacgaaagagaaacagaaggAACGGTTAATGAAAACGTACACAACTCTGAAGCAAGTATGTGTGAATTATTACCAATGATtaaacaagagaaagaatggGGAGATGATCAAGAAAGTGAATTATCGATGGATCAACTAGTTTCAATTGTATTTCAAACTaaaaacaaaccaaaagaaaatagaatgcaTGATAAACAGTTTACTCAAGTACACGTTGACATGAATACGATGGAAGCTCTTTTAAAAGTTTCGAATAACAACTTCCTTGACAAATCTTTGCCGtatgatgataatattaataataatactgatAGTAATACTGATAGTAATACTAATAGTAATactaatagtaataataatagcagtAAAAATAGTCgtaataatagaattattagtAGATCTTATGCATTACGTTCCttaaataattcgaaagaGCTTAATAATAGCATAACACCACCTACAGTTGtacagaaaaataatcaaagcgATGATAAACTAAGTAAACATTTAAATGCgtgtaaaaaatgtataattccTCTGGTAAAATGTGATAGTATTATTAATGTGACAACATCAACTAAATTGAATTCGaactttttacaatttaatagaCTATCTTCTCAGATTTCACGACCATCACTTAATCATAAGTCTATTAACTATAAATCAAcacttagaaaaagaaagagtaccATGTCTTCTTCTATCGAAGAACCGCCCATAAAAATGACTCGATCGCGAAGTATGAATAGTCCATTAAAATTACCTACAAGCAATGATATTATACAtcataggaaaaaaagaatgtttgGTCAAAAATTGGAAAGATCTCtgagaaaagataatattaagaattcCAAAGTTACACCGACTGTTAAGAAACTCAATACTGATGTATTACGAAACAAAAAACTTGCAATTAACAATGTTCAATTAAAGGAAGTTAAGATATCTTTGATAAAGTTACCGGagattaaaaaggaaataatcgaGTCGGCAAATATTGGAAACGAAATTACTCCTACAGAAACTTTTCTTTgtcaaatttgtaatttaccGTTGGCCTCGGAGGAAATTCTGAAAGATCATGTAAAGAAATGTCACACGGCGTATATTTCAACTATTTGTAAAGCGAAGTATACCTCGAAACGACGTTTATTGGAccattatttaaaagaacatGACACGAGGGCTAGCAAATGCTGCGTTTGTCAACAATTCTTAAACAACCGATTTTTACTAAGACAACATATGCTTTTACATTGTATCAAAATAACTTTATCGAAAAAAGATCGTCCTGTTtcaaataagaattttaaatgtagtttatttaaaaataataacttcaaACGTACtggttttaaaataatgctgCGAACGCCAAAACCGTCAAAGAAATGTGGAAAGATTAATCATTATGgtaataaatatgttaataaaccAACAAAACGTCAgaagatttataataatgataagaataatgtagagaaaaaaacgaaatatcaagAGATCGATAAtggtgaaaataataaaaaaaaaacaatagaacctgaagaaattaataatgataagaataatcaagaaaaaacaacagaacctgaaaaaattaataatgataagaataatcaagaaaaaacaatagaacctgaagaaattaataatgataagaataatctagaaaaaacaacagaacctgaagaaattaataatgataagaataataaagaaaaaacaatagaacctgaagaaattaataatgataagaataataaagaaaaaacaacagaacctgaagaaattaataatgataagaataataaagaaaaaacgatagaacctaaagaaattaataatgataagaaTAATCTAGAAAAATCAATAGAATTTCAAAAGGTTGATGATAATGACGATCATGGCGATTGTCTAGAAATACTAGAGGATAATTTTAACGTAAATAACGCTGAGAATATGACGAAACAAGTTAGTAAAAGCAAAGAGAATGATGATGCTGGtgttattgaaaaaagaaatgaatcagAGACTGATACGATACTCTGTATTGACTTAACAGAACCATCAGAAAGTGATAATACTGAAGTTCCTTGTTCTAGTAATATGATAAAAGAACCAATGATGGAACCTTTGCAAGTTGTTAACTCAACATTTATCATTTGTAATCCTAACGAGAATGCGCAAACAAAATTAACattagatattaataattcaatgcAACCGAGTGTTAACGATAGTAACGAGCCTATAGAAGTAATAGAAATTACagcagagaagaaaaaatatccatGTTCTATTTGCAAACAACAGTTTCAAAAGCTTGAAAGTTTGCAACAACACAAACGTACCTACGATCCGTCGCCAAATAATTATTGTGGCTACTGTAAGctatatttttcgaataaatacatattgaaAACTCACATGAATGCTACTCACAATATAAGTATTTGTAATTCATATAAAATGCATTGCCAATTTTGTAATCAAGGTTTCCGTACTCAGAACAATCTTAGAATACACGAGTTGCATTATCATACAACAGCAGTAActgtaaacaataaaaaaatcacgGATTTCTTGCAAATTTCGGACagagaaaataatcgatcgaCAAAAACGATTTGCAAGGTTTGTGGCCTATTCTTTGACACTGTCGAAAGTTATCAGTtacattatatgtatttttataaagatcATATATTTTCCTGTAAATTATGTGACAAAGTATTTCGCGGATTATACATGATGTACCATCACAACAAACTTTTCCATCATTCTGGAGATACTTTAATATCTTACAAATACAAATGCATATATTGTTACGAAGGATTTGTTGCCGAGGTACAATTGCAAGCTCACATGTCACACGTGCATCCGAACAAACAAGTAAACGAATCACCGTTAAATTCTATAAACTATAATCAAACTAATAAATCTTATGTATGTTCCAAATGtaacatggaattttttagcGTTAACGAACTCTTGATAcacattgaatatttttcgaatcaTGGCAGTTATAGATGTTCCAAATGTTCTcgaaaatgttataacttATCGATACTCAACGATCATATGAATCTGACTCACTTCCATGACGGGTTAACGAAAAGATACATGTGCGATATTTGTGATGAAGTTTTAATATCCAAAACTTTTCTCTTGTGTCATCAGAAACACGTTCACGGTGATTTACAAAATGAACAAATCGTATCCACTAACAAAAATCCTACAACTGATTTACATATAGACGAGGTCACTAATGACAATGTATTACAAAATGATAATGAAGCGGTAGTACTTATGAATCCTACTAATTCTTCTCCGATCgctgtaaaaaaatacaatttttattgttcgaTATGTCCCGTTAAGTTTGATaaggaaatttatttgaagGAACATTTGATCGAATATTTGGATTACGGCGATTATCAGTGCAACGAGTGTCTAAGGCGATTCGCAAATTCCGATTTCTTGAAGAAACACGctgaaaatcatttgaaaccGGGTATGGCTAAGACGAAATATTATTGCATTCTTTGCAACGAAGTTTGTAAATCTTCTATGGTCCTCGAATCTCACGTTGCTCATTTGCACGgacgtattatttttaaagatgaTCCGCCGAAGAAtgtttaa
Protein Sequence: MARIRQYSRPLDPITAKFDFSQISTFNRENIMIKQEPCDTNNVKMNENCVSTNIQCKYIDLTKDNSSQQEDVVSSTTENLSYNVITSQIRKEPILMGNAIIENNKHLQQMERSFVIDESNENVGTLEKSDNINKFKLQKNAAQLQNTTTQCSICLLSFPSQQILNFHNSYYESTNIYFCHSCASKSCYHIKEQNSKKTYYYNMYECDVCKNRFKHKEHMQAHLLHYHKKEINRMNVVENDKIMINHSTVSQSITPIKDKLIQQKRDNERETEGTVNENVHNSEASMCELLPMIKQEKEWGDDQESELSMDQLVSIVFQTKNKPKENRMHDKQFTQVHVDMNTMEALLKVSNNNFLDKSLPYDDNINNNTDSNTDSNTNSNTNSNNNSSKNSRNNRIISRSYALRSLNNSKELNNSITPPTVVQKNNQSDDKLSKHLNACKKCIIPLVKCDSIINVTTSTKLNSNFLQFNRLSSQISRPSLNHKSINYKSTLRKRKSTMSSSIEEPPIKMTRSRSMNSPLKLPTSNDIIHHRKKRMFGQKLERSLRKDNIKNSKVTPTVKKLNTDVLRNKKLAINNVQLKEVKISLIKLPEIKKEIIESANIGNEITPTETFLCQICNLPLASEEILKDHVKKCHTAYISTICKAKYTSKRRLLDHYLKEHDTRASKCCVCQQFLNNRFLLRQHMLLHCIKITLSKKDRPVSNKNFKCSLFKNNNFKRTGFKIMLRTPKPSKKCGKINHYGNKYVNKPTKRQKIYNNDKNNVEKKTKYQEIDNGENNKKKTIEPEEINNDKNNQEKTTEPEKINNDKNNQEKTIEPEEINNDKNNLEKTTEPEEINNDKNNKEKTIEPEEINNDKNNKEKTTEPEEINNDKNNKEKTIEPKEINNDKNNLEKSIEFQKVDDNDDHGDCLEILEDNFNVNNAENMTKQVSKSKENDDAGVIEKRNESETDTILCIDLTEPSESDNTEVPCSSNMIKEPMMEPLQVVNSTFIICNPNENAQTKLTLDINNSMQPSVNDSNEPIEVIEITAEKKKYPCSICKQQFQKLESLQQHKRTYDPSPNNYCGYCKLYFSNKYILKTHMNATHNISICNSYKMHCQFCNQGFRTQNNLRIHELHYHTTAVTVNNKKITDFLQISDRENNRSTKTICKVCGLFFDTVESYQLHYMYFYKDHIFSCKLCDKVFRGLYMMYHHNKLFHHSGDTLISYKYKCIYCYEGFVAEVQLQAHMSHVHPNKQVNESPLNSINYNQTNKSYVCSKCNMEFFSVNELLIHIEYFSNHGSYRCSKCSRKCYNLSILNDHMNLTHFHDGLTKRYMCDICDEVLISKTFLLCHQKHVHGDLQNEQIVSTNKNPTTDLHIDEVTNDNVLQNDNEAVVLMNPTNSSPIAVKKYNFYCSICPVKFDKEIYLKEHLIEYLDYGDYQCNECLRRFANSDFLKKHAENHLKPGMAKTKYYCILCNEVCKSSMVLESHVAHLHGRIIFKDDPPKNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01234625; iTF_01233927;
90% Identity: iTF_01234625;
80% Identity: -