Pfus004567.1
Basic Information
- Insect
- Polistes fuscatus
- Gene Symbol
- lov
- Assembly
- GCA_010416935.1
- Location
- QUOI01000006.1:6663836-6679025[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-18 3.7e-15 55.1 0.0 1 44 680 723 680 724 0.96
Sequence Information
- Coding Sequence
- ATGTGTGCATGGAAGAGGAAAACGATCGCGCCACCGGTAGAAACGAAGGAGAACGAGGCGGAGGTGGAAGGCCAGGTTGCCTCCGCCAACAACGGCGACGAGGCCGTTGAGAAAATGTCCAGCACCGCGGAAAGTCCCGATGGGATGGCTTTTCAGTCACACTTCTCCCTTCGATGGAACAATCATCAAGCTCATATACTTCAGTCCTTCGAAGCTCTTTTGCACCAGGAGGAGTTCGTCGACGTTACCCTGGTTTGCGCCGACACTAGTTACAGGGCTCACAAGGTCGTCCTCAGCGCTTGCAGCCCCTTCTTCGAGAAAATATTCGCGGCCCATCCGTGCAAGCATCCGGTGATCGTACTCAAGGATTTTCCCGGTTCGGAAATCTCGGCATTGATCGACTTTATGTATCGCGGAGAAGTGCAAGTCAGTCGAGAAGAATTGCCGGGATTGATAAAAGCGGCGGATAATCTGCAGATTCGAGGATTGACCTCGACGGAACTAAGGGAAGCATCACCGTCGGATACCCAAATGGCCGATTTCAATTTCGGTGAGCCATCTACGCCGGAGGAGGCTAGGCAGGATACTCCCGAAGAGGAGGACAATGCATCGGAAATcgtggcggcggcggcggcggcggcgacaacaacaacgacgacgacgacgacggcgacggCAACGACGACGGCAACGACGACGGCAACGACGACGGCAACGACGACGGCCACggcgacgacgatgacgacggcggcgatgacgacgacgacgacaacggcgacggcaacggcaacggcaacggcaacggcGACGGCAACGACGACAGAGGAAACAACCTCGGGAGTACGAGCATCCGTTAGAGAAACGATCGCGACGTCCAAACGAACGATCTACCACCCTTCGGGGGACCATCGCGATAGATTACCGCACATGACTCATTTGAACTTCGGTGTACGGGACCTAAGAGAAACCTGTAGTTCCCCGTTGATGCCGCGCCGGAAGCAAGCGCGACCACGGCGAAGATCCGGGGAATTGGTACCACAAGACTTGAGCCGACCTCATCCACCGCGAAGTCTAAGTCCACCGTTTACCTCTTTGAACCTTTCGAATAATCACCAACAACACCAAAATCAGCAGCTAAATCAGCACCATTCGCAACTATCCGCGAACGCTTCGAATCAACAACAAGAACAGGAGGAAATGGCGGAGAATTTGTCGATAAAGAGAACCCTCTCGCCGATTGGTCAAGAACAACTTCATCAACAATATCATCATATTAATCAACAATTACATCAGGTTAAAACCGAAAGTAGCGAAACAGCGAGTAGTCCACGGGGTTCGCCGCTTACCGGCACGAGTCTTCTCCATCCCGACGGTTCTTTTCAAGATATTCCATCGGTGGCGGCCGCGGCCGTCGCCGGTATACCTGCCATGTCGGCCGCGTTATCCTTGACGTCGCCCCATCATCACAGCGAGTACCTGACGAGCATGGGCCAATTAGCGGTACGTTGGCTTCCGAATCATCCTCAGAGCCAACTACCACCGCCGCCAACGCAAAGCCATCATTCGCGGGCCGACAGTCCGCTTGGCACCGCTAGAACTTCTCACGCctatcaacaacaacagcaacaacaacagcaacagcaacaacaacaacaacaacaacaacaacagcagcagcagcagcaacaacaacaacaacaacaacaacaacagcaacaagaATCATCGCGACGGGGTTCGATCGCATCGATGTTTCCTCTCGATACCGTTGCTTCTTTGAGCGGACTCTTTTCTCCTGGTGCCGGAATCGACAGGGGATCACTTTTAGCGGATCTTCACGATGGCTTAAAGCCGGAACAGTTGCACGGATTGTTCGTTCCGGCCGCCTTAACGAGTCATCCACCTAGCAAGAAGAGGAAGCTCAGAGCCGAGGGCGATCCACCCAGAAGGTGGACCGATCAAGGAGGACGCAACGTGCCCGTTGGCAGACCCAAGGGTCAACACAGCGCACCGCGGGGCGGTCCACCGAGGTCTTGGACGAATGCCGAGCTGACCGAAGCGCTCCAACACGTgtggaacaaaaaaatgacgaCGTCCCAGGCAAGCCGAATATTCGGCATACCGTACAACAGTTTGTTGATGTACGTGCGCGGTAAATACGGCAAAAGTTTGAAGCTCGAGCAGTTGAGAAGAGATTGCACCGGTGCGACTACCGGCGACGCAGTCATGAATTCTTTGAACAATAACGTGAAAACCGTTCAACAACCACCGGCGCAACTGGGCCATCCGCTCGTCGGCCTTCCACCCCATCCAGCCGACGACAGTGGATTTCCGCATCACTCGCTTCTCGGCTCTAACCTTTCTCAAGCTTATTACCCGGATTTCGCTAGCGCGACCTTCCCCGTGCCGGTTAACATGATACACCTTTTACCTCCGAGCGAGCAGAAGGTTTACGAGCACCCTGGAAGCAGTAACAACAATGTCAGCGTAGGCGGCAATGGAAGTTCCGGTACCACTGGCAATGGTAATACCGCGGGAACTTCTGGTACTgctactactgctgctgctgctgctgctgctggtgttgctgttgctgctgctgccgctgctgccgctgctgctgctgctgcttcttcGAATGCTCCGGAACACGAATCGTCCCATGGCAGTCGGACCCCCTCGCCGGAGGACCATCACCACCACAATCGTCATcgccatcatcatcatcgttatcATCACGAATCGTTGCAACCTCAACCTTCGCAATCGGCACCGGCGTTGCTTCAACAAAATGGCTCGGATTAG
- Protein Sequence
- MCAWKRKTIAPPVETKENEAEVEGQVASANNGDEAVEKMSSTAESPDGMAFQSHFSLRWNNHQAHILQSFEALLHQEEFVDVTLVCADTSYRAHKVVLSACSPFFEKIFAAHPCKHPVIVLKDFPGSEISALIDFMYRGEVQVSREELPGLIKAADNLQIRGLTSTELREASPSDTQMADFNFGEPSTPEEARQDTPEEEDNASEIVAAAAAAATTTTTTTTTATATTTATTTATTTATTTATATTMTTAAMTTTTTTATATATATATATATTTEETTSGVRASVRETIATSKRTIYHPSGDHRDRLPHMTHLNFGVRDLRETCSSPLMPRRKQARPRRRSGELVPQDLSRPHPPRSLSPPFTSLNLSNNHQQHQNQQLNQHHSQLSANASNQQQEQEEMAENLSIKRTLSPIGQEQLHQQYHHINQQLHQVKTESSETASSPRGSPLTGTSLLHPDGSFQDIPSVAAAAVAGIPAMSAALSLTSPHHHSEYLTSMGQLAVRWLPNHPQSQLPPPPTQSHHSRADSPLGTARTSHAYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQESSRRGSIASMFPLDTVASLSGLFSPGAGIDRGSLLADLHDGLKPEQLHGLFVPAALTSHPPSKKRKLRAEGDPPRRWTDQGGRNVPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGDAVMNSLNNNVKTVQQPPAQLGHPLVGLPPHPADDSGFPHHSLLGSNLSQAYYPDFASATFPVPVNMIHLLPPSEQKVYEHPGSSNNNVSVGGNGSSGTTGNGNTAGTSGTATTAAAAAAAGVAVAAAAAAAAAAAAASSNAPEHESSHGSRTPSPEDHHHHNRHRHHHHRYHHESLQPQPSQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01233565;
- 90% Identity
- iTF_01234436; iTF_01232331; iTF_01232485; iTF_01235116; iTF_01234945; iTF_01232922; iTF_01233096; iTF_01233565; iTF_01233750;
- 80% Identity
- iTF_01234436;