Pdor011015.1
Basic Information
- Insect
- Polistes dorsalis
- Gene Symbol
- lov
- Assembly
- GCA_010416905.1
- Location
- QUOG01000011.1:52012-55341[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-18 3.5e-15 55.1 0.0 1 44 644 687 644 688 0.96
Sequence Information
- Coding Sequence
- ATGTCCAGCACCGCGGAAAGTCCCGATGGGATGGCTTTTCAGTCACACTTCTCCCTTCGATGGAACAATCATCAAGCTCATATACTTCAGTCCTTCGAAGCTCTTTTGCACCAGGAGGAGTTCGTCGACGTTACCCTGGTTTGCGCCGACACTAGTTACAGGGCTCACAAGGTCGTCCTCAGCGCTTGCAGCCCCTTCTTCGAGAAAATATTCGCGGCCCATCCGTGCAAGCATCCGGTGATCGTACTCAAGGATTTTCCCGGTTCGGAAATCTCGGCATTGATCGACTTTATGTATCGCGGAGAAGTGCAAGTCAGTCGAGAAGAATTGCCGGGATTGATAAAAGCGGCGGATAATCTGCAGATTCGAGGATTGACCTCGACGGAACTAAGGGAAGCATCACCGTCGGATACCCAAATGGCCGATTTCAATTTCGGTGAGCCATCTACGCCGGAGGAGGCTAGGCAGGATACTCCCGAAGAGGAGGACAATGCATCGGAAATcgtggcggcggcggcggcggcggcgacaacaacaacgacgacgacgacgacgacgacgacgacgacggcaacgacgacgacggcgacggcAACGACGACGGCAACGACGACGGCAACGACGACGGCCACggcgacgacgatgacgacggcGGCGATGACGACGGCCACGGCGACAACGGCGACGGCAACGGCAACGACGACGGCAACGACGACAGAGGAAACAACCTCGGGAGTACGAGCATCCGTTAGAGAAACGATCGCGACGTCCAAACGAACGATCTACCACCCTTCGGGGGACCATCGCGATAGATTACCGCACATGACTCATTTGAACTTCGGTGTACGGGATCTAAGAGAAACCTGTAGTTCCCCGTTGATGCCGCGCCGGAAGCAAGCGCGACCACGGCGAAGATCCGGGGAATTGGTACCACAAGACTTGAGCCGACCTCATCCACCGCGAAGTCTAAGTCCACCGTTTACCTCTTTGAACCTTTCGAATAATCACCAACAACACCAAAATCAGCAGCTAAATCAGCACCATTCGCAACTATCCGCGAACGCTTCGAATCAACAACAAGAACAGGAGGAAATGGCGGAGAATTTGTCGATAAAGAGAACCCTCTCGCCGATCGGTCAAGAACAACTGCATCAACAATATCATCATATTAATCAACAATTACATCAGGTTAAAACCGAAAGTAGCGAAACAGCGAGTAGTCCACGGGGTTCGCCGCTTACCGGCACGAGTCTTCTCCATCCCGACGGTTCTTTTCAAGATATTCCATCGGTGGCGGCCGCGGCCGTCGCCGGTATACCTGCCATGTCGGCCGCGTTATCCTTGACGTCGCCCCATCATCACAGCGAGTACCTGACGAGTATGGGCCAATTAGCGGTACGTTGGCTTCCGAATCATCCTCAGAGCCAACTACCACCGCCGCCAACGCAAAGCCATCATTCGCGGGCCGACAGTCCGCTTGGCACCGCTAGAACTTCTCACGCctatcaacaacaacagcaacaacaacagcaacagcaacaacaacaacaacaacaacaacaacagcagcagcaacaacaacaacaacaacaacaacaacaacagcaacaagaATCATCGCGACGGGGTTCGATCGCATCGATGTTTCCTCTCGATACCGTTGCTTCTTTGAGCGGACTCTTTTCTCCTGGCGCCGGAATCGACAGGGGATCACTTTTAGCGGATCTTCACGATGGCTTAAAGCCGGAACAGTTGCACGGATTGTTCGTTCCGGCCGCCTTAACGAGTCATCCACCTAGCAAGAAGAGGAAGCTCAGAGCCGAGGGCGATCCACCCAGAAGGTGGACCGATCAAGGAGGACGCAACGTGCCCGTTGGCAGACCCAAGGGTCAACACAGCGCACCGCGGGGCGGTCCACCGAGGTCTTGGACGAATGCCGAGCTGACCGAAGCGCTCCAACACGTgtggaacaaaaaaatgacgaCGTCCCAGGCAAGTCGAATATTCGGCATACCGTACAACAGTTTGTTGATGTACGTGCGCGGTAAATACGGCAAAAGTTTGAAGCTCGAGCAATTGAGAAGAGATTGCACCGGTGCGACTACCGGCGACGCAGTCATGAATTCTTTGAACAATAACGTGAAAACCGTTCAACAACCACCGGCGCAACTGGGCCATCCGCTCGTCGGCCTTCCACCCCATCCAGCCGACGACAGTGGATTTCCGCATCACTCGCTTCTCGGCTCTAACCTTTCTCAAGCTTATTACCCGGATTTCGCTAGCGCGACCTTCCCCGTGCCGGTCAACATGATACACCTTTTACCTCCGAGCGAGCAGAAAGTTTACGAGCACCATGGAAGCAGTAACAACAATGTCAGCGTAGGCGGCAATGGAAGTTCCGGTACCACTGGCAATGGTAACACCGCGGGGACTTCTGGTActgctactactgctgctgctgctgctgctgctgctggtgttgctgttgctgctgctgccgctgctgccgctgctgctgctgctgcttcttcGAATGCTCCGGAACACGAATCGTCCCATGGCAGTCGGACCCCCTCGCCGGAGGACCATCACCACCACAATCGTCATcgccatcatcatcatcgttatcaTCACGAATCGTTGCAACCTCAACCTTCGCAATCGGCACCGGCGTTGCTTCAACAAAATGGCTCGGATTAG
- Protein Sequence
- MSSTAESPDGMAFQSHFSLRWNNHQAHILQSFEALLHQEEFVDVTLVCADTSYRAHKVVLSACSPFFEKIFAAHPCKHPVIVLKDFPGSEISALIDFMYRGEVQVSREELPGLIKAADNLQIRGLTSTELREASPSDTQMADFNFGEPSTPEEARQDTPEEEDNASEIVAAAAAAATTTTTTTTTTTTTTATTTTATATTTATTTATTTATATTMTTAAMTTATATTATATATTTATTTEETTSGVRASVRETIATSKRTIYHPSGDHRDRLPHMTHLNFGVRDLRETCSSPLMPRRKQARPRRRSGELVPQDLSRPHPPRSLSPPFTSLNLSNNHQQHQNQQLNQHHSQLSANASNQQQEQEEMAENLSIKRTLSPIGQEQLHQQYHHINQQLHQVKTESSETASSPRGSPLTGTSLLHPDGSFQDIPSVAAAAVAGIPAMSAALSLTSPHHHSEYLTSMGQLAVRWLPNHPQSQLPPPPTQSHHSRADSPLGTARTSHAYQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQESSRRGSIASMFPLDTVASLSGLFSPGAGIDRGSLLADLHDGLKPEQLHGLFVPAALTSHPPSKKRKLRAEGDPPRRWTDQGGRNVPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGDAVMNSLNNNVKTVQQPPAQLGHPLVGLPPHPADDSGFPHHSLLGSNLSQAYYPDFASATFPVPVNMIHLLPPSEQKVYEHHGSSNNNVSVGGNGSSGTTGNGNTAGTSGTATTAAAAAAAAGVAVAAAAAAAAAAAAASSNAPEHESSHGSRTPSPEDHHHHNRHRHHHHRYHHESLQPQPSQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01233750; iTF_01232331; iTF_01232485; iTF_01235116; iTF_01234945; iTF_01234265; iTF_01234436; iTF_01232922; iTF_01233096;
- 90% Identity
- iTF_01234265;
- 80% Identity
- iTF_01233750;