Basic Information

Insect: Polistes dorsalis
Gene Symbol: RREB1
Assembly: GCA_010416905.1
Location: QUOG01000014.1:2193300-2204814[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.037 2.6 8.4 0.3 1 23 52 74 52 74 0.96

2 16 0.00043 0.03 14.5 0.3 1 23 88 110 88 110 0.97

3 16 1.8e-06 0.00013 22.0 0.8 1 23 116 139 116 139 0.97

4 16 0.075 5.2 7.4 0.1 1 23 235 259 235 259 0.93

5 16 0.86 60 4.1 3.1 2 23 265 287 264 287 0.93

6 16 2.1 1.5e+02 2.9 2.6 1 20 343 362 343 364 0.85

7 16 0.44 31 5.0 0.2 1 23 479 501 479 501 0.96

8 16 2.5e-05 0.0017 18.4 0.3 1 23 510 532 510 532 0.98

9 16 0.0011 0.075 13.2 2.8 1 23 538 561 538 561 0.97

10 16 0.0011 0.081 13.1 2.7 1 23 957 980 957 980 0.96

11 16 0.00014 0.01 16.0 0.1 2 23 1264 1285 1263 1285 0.97

12 16 7.2 5e+02 1.2 4.7 1 23 1291 1314 1291 1314 0.95

13 16 0.0036 0.25 11.6 2.2 1 23 1351 1375 1351 1375 0.97

14 16 0.9 63 4.0 6.9 1 23 1463 1486 1463 1486 0.96

15 16 0.018 1.2 9.4 0.3 2 23 1539 1560 1538 1560 0.92

16 16 0.014 1 9.7 5.1 1 23 1566 1588 1566 1588 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.037	2.6	8.4	0.3	1	23	52	74	52	74	0.96
2	16	0.00043	0.03	14.5	0.3	1	23	88	110	88	110	0.97
3	16	1.8e-06	0.00013	22.0	0.8	1	23	116	139	116	139	0.97
4	16	0.075	5.2	7.4	0.1	1	23	235	259	235	259	0.93
5	16	0.86	60	4.1	3.1	2	23	265	287	264	287	0.93
6	16	2.1	1.5e+02	2.9	2.6	1	20	343	362	343	364	0.85
7	16	0.44	31	5.0	0.2	1	23	479	501	479	501	0.96
8	16	2.5e-05	0.0017	18.4	0.3	1	23	510	532	510	532	0.98
9	16	0.0011	0.075	13.2	2.8	1	23	538	561	538	561	0.97
10	16	0.0011	0.081	13.1	2.7	1	23	957	980	957	980	0.96
11	16	0.00014	0.01	16.0	0.1	2	23	1264	1285	1263	1285	0.97
12	16	7.2	5e+02	1.2	4.7	1	23	1291	1314	1291	1314	0.95
13	16	0.0036	0.25	11.6	2.2	1	23	1351	1375	1351	1375	0.97
14	16	0.9	63	4.0	6.9	1	23	1463	1486	1463	1486	0.96
15	16	0.018	1.2	9.4	0.3	2	23	1539	1560	1538	1560	0.92
16	16	0.014	1	9.7	5.1	1	23	1566	1588	1566	1588	0.98

Sequence Information

Coding Sequence: ATGTCTTCGTTGTTCTATACTCGTCAACATTTTCAAGTGACTGTAAAAAGCGAGCCAGATCCAGAACAAGAACAGGAACACGAAGAGGAACAGGTTGAGATACAGGCGGATGCAGCATCTCCTACTTCTAGtATCGATTTACCCGAAAATACACACCCGTGTCCAGCTTGTCCGTCAATACTTCCGACATCTCACGATCTGACGAATCATCTGCGCGAGCATAATTCACCAAGGAGTACAGATTACGGCGGAGAAGAGGATTACTGTTGTGCTATTTGCCAAAAAGTCTTGAGTTCGGCAAGTTCATTGGACCGTCATGTACTCGTACATTCGCGTGAAAGACCATTCAAGTGTAAATATTGTGACATAGCTTTCACAACCAATGGTAATATGAACAGACATGTTAAAAGTGCTCATCGCGGTGAAAGATCACCTCCGCAGAGTTACACCGAATCAGAAAGTACGAGCAACGATTCGATAAACTCGTCTAGAAGGCAACCATTAGAAgaacacaacaacaacgaaaTATCGAAACGTACATCGCCAAATTTCTTGATTAGAGAAAGATTAGCTAAGAATTTAACGAACAAACGTAAATCCCCGTCGTTCACCAGGGAAGATGAAAATCCAAGAAAGCACAAGATCTTGTTGAACAATTCGAGGACAGAGATCAAACGTACGCCCACGGAGACGCAAAATTCTTACAATTGTCCGGTATGCAATAGGCAAGACTTCGCAACGAGCGGTCTCCTGGAAACACACTTGGAACAAAATCATCCCGAATTCACGATAAGGTGCGAACCATGTAACCTATCTTTCAAAAATCATCGAGTATTAAACTTACACCGATGCATGATACACTTTTCTGACTATCCCGTTGGAATCCCCGCGAGAAATTTACGTAATTCCGTAGTAGGATTCGACGATTTAACTTTTGTTGATTTTACATCGGCTAAATTTCCAACTATTGCTAGGGCTATGTGCGAGCAAGCTATGCACCGACCGGCATCCGGAGAAGGTACCAACTTCCAGTGCAGCAAATGTTCAAGAGCATTTCCTTGTTTCAAGTCAATGAAAGAACACCAAAATGAATGTGGTAAGTGTAGGTCAAATTTGCAATGTAGACCGATAGATATTGGGGAATCCCAGAGGGATTATTTTTTCGCGGGCCTTGAATTGCACAATAAAGCGGCATTGACCGAGGCCAAAGATGGAAAGGATTTAGCGGATATAGAAAGTATTTTGTCCGTTACATCGGGTCCAATTTTACAAAACTTTCCCCGTTCGGATGCTAGTACACctgagaataatattaaatttaattcgagCGTTGGTTCTTCTGGTTCGTCAGGAACGATGTCGTCCGAATATCACGAGGAAGAGGCACAGGATTTATTCGCTGCCGAATTTAGAAAGATGAAATTAAAAGGAGAATTCCCTTGCCGATTGTGCACATCGATATTTCCTAATTTGAGGGCCTTGAAAGGACATAATCGTGCTCACATGGGCGTAGGACCAGGAGTTCCATATCCTTGTAACATGTGCCCTTATACTAGTACCGATAAGGCCACTCTTGTAAGGCATTTAAGATCTCACAACGGTGATCGGCCATACGAGTGCTCGTTATGCAATTACGCTTTTACCACTAAAGCAAACTGCGAGAGGCACGTTAGAAATCGTCATGGCAAATTAACAAGGGAAGATATCAAAAGTGTTTTGATTTATCATCCGAATGAGGACTCGACGAATGATAACATCGGTAATTCGCCTAGAGTGACGAAAGACGAGGCGAGAAAAAGTTTGATCTATCCGAACGATAGAGAAGATTCgatgcaacaacaacaacagcaacgtTATCTGCCAATTCCGATTGACTCTAAAGGTGACATTAGAGTAATAGAAGAAGCTAAATTACCTAGCCCTGAATTAGCTTCTTCTATTCGTAATATGATAGTTAATCATTGCGAAAGCAATGATACTTACGGGAGATCGAGCATACCAGGTTCCGGTCTTATTTCAAGAACCATGGAAGAAGCTACCACGTCTCAAGATCAAAGTGGTAGAGCTGATGATGATCTTGAATCAAGGTCATCCAATGAAAGCGTGCCTCTAGTCATTAATAACGAATCAGATATGCACCAAAGAATGCAAGCTAGTCCGattaatttgaagaaaatgtCTAACCCATCTAACACCGGAAATTCAAATCAGGATGGACCGTTGGATCTTAGCATGGACGTTCTAGATTTGAGCAAGAAGGCTAAGGAAAGAAACGGTGCTGGATCATTGAGATCTAACGAATATCCTAACAACGATCGTAGAGAATTTTACGATTCTACCAGTCAATTATTTCTCACTCAGGCTCTTTTGCAAGCAAGTCAAAATACTTCACCGGGTACTTCACCTAGTACCTCCCAAGGAAATTCCCAGACAAATCCTTTACAAAATTTCTACGCCAATGctcaaataatttatcgcaATTTGGGATCGATTTCTAACCGGGTAAATGCTGGAATTTTATCATCTTACATGTTCAATTCGCAATTTTTTGGACAAGACTTAAACATCAGTGACAGAATTCAAAAGGAATTCGCTAGGGGCTTGCAATTAACCAGCGGTGGTACTTTAGTTGATCCATcgggaaataataatttccctGCATTTCCACAAGCCAACGATGCTCCGTCGCAAATGGTAACCGATCAAAATGATTATACCAGTTTGCTCGGTACGAAGATGACCAATAAGACTATATCACCTCGTGAAAAGGTTGATAATTCGGCTTCAACGAATTCGGTTAAAATGATCATCAAGAATGGCGTATTAATGCCTAAACAAAAACAACGAAGATATCGTACCGAACGACCATTCTCTTGCGGACACTGTTCCGCTAAATTCACATTACGAAGTAACATGGAGAGACACATAAAACAACAGCATCCCGAATTTTGGAGTCAACGACCACGGGGTGGTCATTCGACTAGAGGTAGACCACCAGCAAATcatcaaaatataatgaaaaattctgTACAGTCAAACTCACAATCGTCATCCCAATCTTATTCCAGCATACTCCCCAAAGCTGATCCATCAACAACGACAGTAGAATCAACCGGTAGACATTCGATTTCAGAACAAGTGAAATATGCTATTCTGGCGCAACAATTGAAGGCTAACAAAATGGACGATAACGATACCGACGAAGAATTGATCATCGATGAAGATCCAGTTGATAAGGAGATGCAAGAATCTCAGGAACAAACTGAACAACGTTCGACGAGTTTGTTGAGAGGACAATTGGAAGGTAACGAATCTAACAAGGATATCGTCGTGAAggaagaaatattagaaagagATTCATCCGATGTATTTAATAACGAACAATCTAAGGAACATAACAATACCAATGAAAACGGCCAAAGTTCTGGTAACGAACATGCACTCGATGATAAAACGGAAGAGACTACTTTGGATGCTAATTCGAGACACGCATTCAAAATGGATAATTGCAATGATACCATTCAAGATAGACAAGAGGATAATACTGCTGATCTTGCTAGCGTATCGGAATTATTGGACAACGCTTCTCATCAGTATCAACACTTTCAACCGCAATATCTGAGCGACGAGGAAGGTTTAGTCGCGTCTACGAGCGATTTCAATAATTCCGGAAGCGAGGATAAATCTGACTCAGTTAATTCCGGAAATTCTAACAACgcttcttcgaaaaaaaagaagaaaaagaaaaagaagaagaaatcggCTTACTCTTTAGCACCTAACAGAGTAATGTGTCCCTATTGCGATCGTCCATTTCCATGGACGTCATCTCTCAGAAGACACATCCTTACACATACCGGACAAAAAccatttaaatgtatatactgTTCACTTTTGTTCACCACCAAATCTAATTGCGATAGACACCTATTGAGAAAGCACAAAACTAATCCGTACAAGATAAGAAGAGCTAGAAATTCGTCATCGCCTGACAGTCAAGTTGTCAATACgaataatacattttctatGCGAAATGTTCCCGAAAGGCCGTACAAATGTAATCAATGTCCGAGTTCAACGTTCTCAACGTTAGGAAACTTGAAGAAACATCGTTCGACCAAACACtcgcgtaaaaataaattgagatCCGTTTCGCCGTCGACCGAGACGCAAAATAGTCCACTACCATCATCTAAACAAAATGATCTTAGCGATTACGAGAGCCGATCGTCAAGCGTGTCAGAGAATACGGAACAACAACAGGTATCACTGTCCGAAActcaaaaacaaaattcaaataattctaacGCATCGTTGTCCAATAACGAATTGTCGCGATCACGAAGAACTTCACCGAGATCATCACCCGGTCCTAACGATGTACCATTCAAGTGTCATCTTTGTGATTGCGGATTTGCCGATCGTCACGATTGTTTGGAACACATCAAGATCAATCATAATGAATCTTACGAGATGCTCGTAGCAAAGGGTGCTATGGATATGGATATTGACGGGCTGGAAGATCATCaagtaccaccaccaccacctcagCAACATCTTAGCGATggggaggaaagaaaaggccGATTTCCAGATTACAGTAATagaaaaGTAGTCTGCGCCTTTTGTATAAGAAGATTTTGGTCAGCCGAAGATCTTCGTCGTCATATGAGAACGCATACAGGGGAAAGGCCATTCTCGTGTGACATTTGTCTTCGTAGATTCACATTGAAACATAGCATGCTGCGTCATCGTAAAAAACACGAATCAGTCGATTCAACGATGTACGTTGGTACCAGCGGTGACGAAGAAAATTCACCTACTCAACCACCTACGATAACACCCCGTACACAAAAGCAACCACCAGTTTTAATGGCCACCAATATCAATAATTCGAGAATTCAAGATAGAATCTCGTTGTCTGTTGCAACCGGTGATGCCGCGCCAGGCGGTGGTTTTATGAGATACAACAGTTACGAAAAATTAACAACATTTGCCGGGAAACTTACCGCCAATAACGCTCAGCATcataataatgcaataaataatgaattatccGAAAATACTGACAACGATTTGATCTCGAATCTTTTAGGAATACGCGACAAAAGTTTTATCGATAGAGTTCTTCAAGCATCACCCGACGATGCTGCTAAATTGTTAGGCGTACAACGTAGTCACGAATGA
Protein Sequence: MSSLFYTRQHFQVTVKSEPDPEQEQEHEEEQVEIQADAASPTSSIDLPENTHPCPACPSILPTSHDLTNHLREHNSPRSTDYGGEEDYCCAICQKVLSSASSLDRHVLVHSRERPFKCKYCDIAFTTNGNMNRHVKSAHRGERSPPQSYTESESTSNDSINSSRRQPLEEHNNNEISKRTSPNFLIRERLAKNLTNKRKSPSFTREDENPRKHKILLNNSRTEIKRTPTETQNSYNCPVCNRQDFATSGLLETHLEQNHPEFTIRCEPCNLSFKNHRVLNLHRCMIHFSDYPVGIPARNLRNSVVGFDDLTFVDFTSAKFPTIARAMCEQAMHRPASGEGTNFQCSKCSRAFPCFKSMKEHQNECGKCRSNLQCRPIDIGESQRDYFFAGLELHNKAALTEAKDGKDLADIESILSVTSGPILQNFPRSDASTPENNIKFNSSVGSSGSSGTMSSEYHEEEAQDLFAAEFRKMKLKGEFPCRLCTSIFPNLRALKGHNRAHMGVGPGVPYPCNMCPYTSTDKATLVRHLRSHNGDRPYECSLCNYAFTTKANCERHVRNRHGKLTREDIKSVLIYHPNEDSTNDNIGNSPRVTKDEARKSLIYPNDREDSMQQQQQQRYLPIPIDSKGDIRVIEEAKLPSPELASSIRNMIVNHCESNDTYGRSSIPGSGLISRTMEEATTSQDQSGRADDDLESRSSNESVPLVINNESDMHQRMQASPINLKKMSNPSNTGNSNQDGPLDLSMDVLDLSKKAKERNGAGSLRSNEYPNNDRREFYDSTSQLFLTQALLQASQNTSPGTSPSTSQGNSQTNPLQNFYANAQIIYRNLGSISNRVNAGILSSYMFNSQFFGQDLNISDRIQKEFARGLQLTSGGTLVDPSGNNNFPAFPQANDAPSQMVTDQNDYTSLLGTKMTNKTISPREKVDNSASTNSVKMIIKNGVLMPKQKQRRYRTERPFSCGHCSAKFTLRSNMERHIKQQHPEFWSQRPRGGHSTRGRPPANHQNIMKNSVQSNSQSSSQSYSSILPKADPSTTTVESTGRHSISEQVKYAILAQQLKANKMDDNDTDEELIIDEDPVDKEMQESQEQTEQRSTSLLRGQLEGNESNKDIVVKEEILERDSSDVFNNEQSKEHNNTNENGQSSGNEHALDDKTEETTLDANSRHAFKMDNCNDTIQDRQEDNTADLASVSELLDNASHQYQHFQPQYLSDEEGLVASTSDFNNSGSEDKSDSVNSGNSNNASSKKKKKKKKKKKSAYSLAPNRVMCPYCDRPFPWTSSLRRHILTHTGQKPFKCIYCSLLFTTKSNCDRHLLRKHKTNPYKIRRARNSSSPDSQVVNTNNTFSMRNVPERPYKCNQCPSSTFSTLGNLKKHRSTKHSRKNKLRSVSPSTETQNSPLPSSKQNDLSDYESRSSSVSENTEQQQVSLSETQKQNSNNSNASLSNNELSRSRRTSPRSSPGPNDVPFKCHLCDCGFADRHDCLEHIKINHNESYEMLVAKGAMDMDIDGLEDHQVPPPPPQQHLSDGEERKGRFPDYSNRKVVCAFCIRRFWSAEDLRRHMRTHTGERPFSCDICLRRFTLKHSMLRHRKKHESVDSTMYVGTSGDEENSPTQPPTITPRTQKQPPVLMATNINNSRIQDRISLSVATGDAAPGGGFMRYNSYEKLTTFAGKLTANNAQHHNNAINNELSENTDNDLISNLLGIRDKSFIDRVLQASPDDAAKLLGVQRSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01512393;
90% Identity: iTF_01234563; iTF_01235238;
80% Identity: -