Pdor004222.1
Basic Information
- Insect
- Polistes dorsalis
- Gene Symbol
- tfip11
- Assembly
- GCA_010416905.1
- Location
- QUOG01000018.1:1445532-1448769[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-98 1.1e-94 316.9 18.0 1 275 395 662 395 662 0.98 2 3 0.00034 2.5 7.3 0.1 242 274 674 706 666 707 0.89 3 3 0.37 2.7e+03 -2.6 0.0 141 190 725 774 723 784 0.77
Sequence Information
- Coding Sequence
- ATGTCGGAAGACGAAGTGGAAAGTTTCGAGATAACCGATTACGATttggaaaatgaatttaatattaatcgtcCTAGACGAAAACTTACGAAAAAGCAGCAGATGCTTGgCATCTGGGCAGATGACAGCGATGAAGATGAACTTTCTGCAAGACCATCTTtcaaaacatataataaaggGTCAAAGAATTACACAGTTCCGGTTCATTTTGTTGCCGGAGGGATTCAACAAGCCGGTAAAACatcagaagaaaaagaagataaagacaaagatgaagaagaggaggatgatACAAATATGTCCCAAAGAGACGAGGGATATTTTCATAGTTCaagCTCGGAGGATGAGAAACCGAGTAATTCTAAACAACGTGCATCATTTTCGTTGAACGTAGAAGGGGATATAGCTGGATTACGTAAAAAGAGATATCAAGTGAATCCTTCGTTTATGAAAAGCGGTGTTGGTAGTTGGGAAGTTCACACTAAAGGAATTGGAGCAAAACTTTTACTACagatGGGTTTTGAACCTGGCAAAGGATTAGGAAAACAATTGCAAGGAATAAGCGCACCAGTAGAAGCTCACTTTAGGAAAGGTAGAGGTGCCATTGGTGCATACGGTCCAGAAAAAGGACCAAAAGTTAttgaaaagaggaaagaagaagtagaagaaacaaaagattCTAAACCCAAAGTATCTCAATGGCGTAAAGGAGATACGAttagtaataagaaaaaagtcaaataCTCATATCGCAGTGTTGATCAAGTTTTAGAAGACGGTAAATTGAAACCAAATAGAAAACTTCCACTTTCTAGTGAAATGAGCAGGGTCAAAGTTATAGATATGACTGGACCCGAGCAAAGAATTTTGAGTGGTTATCATGCGATAGCTAGTGGTCAGCAATATCCCGATGAAACTATTCCAAGCGttaataaaaaggataaaataaattttgcttTACCGGAATTGCAGCATAATTTAAATCTTCTGGTGGATATGTGCGAACAAGATATCATACAGAATGATAGAAGAGCGAGACACCTTAACGATAGAGTGGTAGTGTTAGAagcggagaaaaaaaatttatccaaAGTTGTAGATCAGCATGGACAACTCATTGATACTTTGGAAAATGTTCTAGCCGTTGTCGATAGATTAATGGACGAAACAAGCGATATAACGTTGCAAGATATCGCCGatgtatttaaaaacttacaagaaaaatattacgaggAATACAAGATGTACGAATTAGGCGATTTGGCAACCAGTTTTGTGGGTCCGAAAATAAAGGATTATTTAGTTTCTTGGAATCCGTTAATGCAACCGAAACAACCAATTAAATTGTTTGAACaatggaaagaaatattagaagcTGGTATGAGTCCACTTCAAACAAGAACAATTCATCCCTACGGCCAACTTGTTTGGAATGCTTGGATGCCTTCTATCAGAGGAGCTGTACAtcAATGGGCATGCAGGCAGCCAGATCcgttaatagaattattagaaCATTGGATACCATTGTTACCTGGATggatttttgaaaatattttagatcTGTTAATACTTCCTAAGCTTACTTTAGAAGTAGAAGAATGGAATCCCCTCACAGATACTGTTCCAATACACACATGGATCCATCCATGGTTACCATTAATGcgtAATTGGTTGGATACGTTAATATATCCAATCATAAGACGGAAACTGGGTTCTGCTTTAGGAGGCTGGCATCCGTCAGATAGATCGGCAAGATTAATGTTACAACCTTGGTCGGAAGTATTCGCTAAGGCCGACATGGAAGCTTTCctagttaaaaatattataccaaAACTTCAAATAGCTTTATCCGAGTTTGTCATAAATCCGCATCAGCAGCATTTGGATCAATGGAATTGGGTAATAGAATGGAAAGAATTAATACCATCACACATAATGGCCAATTTActcgacaaatttttcttccctaAATGGGAACAAGTATTATCTTTTTGGTTAAATCATTCTCCGGATTACGATCAAGTTATGAATTGGTATATGGGATGGAAGGGTATGCTGAGTGATAAATTATTGGCTGAACCATTAGTAAAagaACATTTCAAGAAGACTATCGATATACTAAACAGAGCGTTAACTGCACCTCCAAGTCATCAACCAGGAACTATGGACCAAGTTTCGTACTTGAACAATTTGGAGAGAACTCAGTCAACGATGATGTCGCAGATGCCATCCGTGGTACAACCAAGGATAGAGAGATTGGCAGAGGCAGTTAGAATAGCAGCTCCACAAATTCATTTAGGTTTTAAAGACCTCATTCAGAGAAAGTGCGAAGAACGTGGAATACTCTTCATGCCTATTCCAAATAAATACAGAGAAGCGAAGCAAGTTTACAAAGTGGGAAATGTTCAAGCATATATAGACGGTAAAATGATCTTCGTTTATCACAACGGAGCCAATTGGACGCCAACGAATGTGAACGCCTTGCTCGATATGGCAGAACTTTAG
- Protein Sequence
- MSEDEVESFEITDYDLENEFNINRPRRKLTKKQQMLGIWADDSDEDELSARPSFKTYNKGSKNYTVPVHFVAGGIQQAGKTSEEKEDKDKDEEEEDDTNMSQRDEGYFHSSSSEDEKPSNSKQRASFSLNVEGDIAGLRKKRYQVNPSFMKSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHFRKGRGAIGAYGPEKGPKVIEKRKEEVEETKDSKPKVSQWRKGDTISNKKKVKYSYRSVDQVLEDGKLKPNRKLPLSSEMSRVKVIDMTGPEQRILSGYHAIASGQQYPDETIPSVNKKDKINFALPELQHNLNLLVDMCEQDIIQNDRRARHLNDRVVVLEAEKKNLSKVVDQHGQLIDTLENVLAVVDRLMDETSDITLQDIADVFKNLQEKYYEEYKMYELGDLATSFVGPKIKDYLVSWNPLMQPKQPIKLFEQWKEILEAGMSPLQTRTIHPYGQLVWNAWMPSIRGAVHQWACRQPDPLIELLEHWIPLLPGWIFENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMRNWLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSEVFAKADMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVIEWKELIPSHIMANLLDKFFFPKWEQVLSFWLNHSPDYDQVMNWYMGWKGMLSDKLLAEPLVKEHFKKTIDILNRALTAPPSHQPGTMDQVSYLNNLERTQSTMMSQMPSVVQPRIERLAEAVRIAAPQIHLGFKDLIQRKCEERGILFMPIPNKYREAKQVYKVGNVQAYIDGKMIFVYHNGANWTPTNVNALLDMAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513470;
- 90% Identity
- iTF_01513470;
- 80% Identity
- -