Pdor013692.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polistes dorsalis
Gene Symbol
RFX7
Assembly
GCA_010416905.1
Location
QUOG01000026.1:1110810-1116049[-]

Transcription Factor Domain

TF Family
RFX
Domain
RFX domain
PFAM
PF02257
TF Group
Basic Domians group
Description
RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-33 5.4e-29 100.3 0.2 3 78 276 351 274 352 0.97

Sequence Information

Coding Sequence
ATGAGTACTGATAATCATGATCAGTCCAAGCCcaaaccaccaccatcatcgctaccatcatcatcatcatcatcatcatcatcatcatcatcgtcatcatcatcgtcgtcaacatcatcttcatcatcatcatcaacagcagcaacaacagcaacagcaacagcaacattACCACCGCCACCGCCGCCACCACCGCTACCACCTCCACCTGCGATACCGCCATCGCCATCGCCACTATCATCCTCTTCTACGAGGAACAACGTACCCATCGACGAGTACGCTTTCGACGGCACGCGCATCAAGAAAGAACAAAGTGACACTTGTCTCGAGAACGGCGAAGGCGCCGGTGCCAGCAACCTCAGTGGAGCAAAcagtggtggtggcggtgctACTAGTGCTGGTGTTGGTCCTGGTCCTGGAGGAAACCCTGCTGCTATCACAAAAGCCGGTATCAACGACAACAAGAGAGGACCGGGGCCTACCCCTGCTCCCGCCTCCGCTGCCGCTCCAACTGCTGCTGGTAGACTCTCCAACGGGTTCCACGAAGGCGACCTACTTCAGGACATCATCGCGGCCAAGTTCACGACCCTGGCGAATCACGGTTCCACCGGCAAAAACGACAAGATTCGTCTGATGATCGAGGACAGCGTCAgCGAAGAATCAAAATCACGAGTTCAGGAAATATTTTCCCAAGTCGAGCAActtaaaatagaagaaaaattgttgctGTACCTGAAGCTTCCATTGTCGTTGAATAATACAGGAGGAACCGTTGATCCATTGAGGCAGCCATTAAATCCATTAGGAAATCGTTATGAAATTCATCAGACTATTATGTGGATTAAAACACATTTGGAAGAGGATCCCGAAGTTTCTTTACCGAAACAAGAGGTCTACGAAGAATATAAcatgTACTGTATAAGGAATTCTATGAAACCACTATCAACTGCAGATTTTGGAAAAGTTATGAAACAAGTATATCCACGGGTACGTCCTCGAAGACTAGGCACACGAGGCAATTCTCGCTATTGTTATGCAGGAATGCGCAAGAGAGTTAAATTGGAAGCTCCGACATTGCCTAACATATCTGGAACACAAACTgAGGATGGTacggaagaaaatattacagaAGAAATGCTAGGTGCTGCTTCAACGTTAATTAGGGAATGGGCAGAAAATCTGTTAGGTTTGAAATTTCCAACTTTGAGTGCCTTAGCACGTCATCTTGTGGATAATGTTTGCGTCGATGTAAGATCGTTAGCTGCCATATGCATTTTATCCGCTTCCAGGAAACCAGATACTTCATCCAACGAAGaGTCAACGACTGATTTGTCAGTTACATCGATATCTGGAAAACCAGGAAAATTAAGAGAAGCGCAGATACAATTACAACGTAAGCTACAACAACGAGAACATATAAAAGATCAAAAGCATAGGCACATTGACAATGTTACACTgaatcagagtaaagaaaagatagtTGATAATAAAGCAGGAGTGAATAAGGGAAGTAAAAAAGTTAAGACCAATCAGTCGCCTCAGGGTACAAATACGCCAGCTGGACAATATGTGTTAAACAAACATAATCTACCTGCCACTGTTACAGTTCGGCAGAAAAAGGTTCTTAAAGCTAGCAGTCAAGCTTGCAACAACGTTTCTCCGGAATCCAACTGTGATAATATAGTGGTACAATCGATCGAAGATGTTCAGAATAATAGCAGCACTAGAGTAGTAACGACCAATTGCGTTAATTCAAAGCGAGACGTTAAACCTAAAAATTCCAGAAAGCGTGCCAATCTCAATGTACCAAATCAACCATCGGAATCCAGTCCTGAGAAGCAAACTAAACTTGCAGAACAGCAGGTACATGAAAATGTAGAGCATTCCAGTATGTTGTTACCTAGGCTCTCATCTGTACAACGTGCGGGAAAAATATCAGTGATATTAGCTAGTAACCTGAAGCCTACCAAGTGTAAAGCCACAGAGGCTGTTAGTAATCAGCCTGCCAAAAACTGTGATATTGAATTGCCAATATGTTCCAAAAATTCCATCAAAATAAATGGTTGTCCCAGTAATTTTGATTCCAATGGAAATGGAACTGAAACATCGACTCTATTAACCAAGGATCAACTAAGATTGTTGCAAGAAAATTCAAACCTCATAAGTAAGAATGATAAGCTATGTTCCCTTGATGCGGATGCTTTGGATGATTATTTAAACGGGGGTAATAATTCTCAAGAACAAGAAGAGGAATTGTTGCAGTATTTTCAACAGAATAGTTCGTCTAGTTCAGATGTAGAGGCAAATGCCATTACCGGGGACACAGAACAAATCTCAAGATCCGACAAAGTGTCTCAGCTAAGATTAAtattagaacaaaatttaaagGCTGGTACCGAGCACCCACCTATCGACATAGTATCTGCTACTATTGTCAGGCAGAATACGGTTAGTGAAAAACAGGAGGTTACTCAAACGCATAATTTGATACTTCCAACATTGTTAAATCATTCGAATCAGACTAATACCAGACGCAGGGTTAGTTTTGAAACGAATGTAGTCGAACATGTACAAGATTCCAATGTTGTTGCGAACACCGTACCTCAAAGCCCAAATACGCGTCGTAGGATATTTAATTTCACACCTATATCGCCTGGTCCACATTCGCCTATCAATGGTCGTGCTTCCAAATCTAATTCCGCAAACGCGAGTCCCTTTGTATCACCAAGAAATACACCAGTGCCTCGATCACGGAGTAATCTACAGGGTGGCAGTTTTAGATCACGAGCAAGTCAGAAATCTTTGTCGCGTTCCATATCGTGCAGCATGCCATATACTGGAAAGAACGATACATTTGTAGTACCTACCAGTGGTCCTGAATTAGTACGGCAAGTGTCTATGCCACAATCACCTCTTACTTGTACAAAGTCATCTGAAGTACAGGTTGGTGGTAGCACGACACATATTACTATAACATCCAAGCAAGAAAATCAAGGATCACAATGCCCTCCATTTTTAGCATCCGATTTGGCACCGCAAAAACAATTGCTTATTAATTATCCAAGCCAAGAAAATTTACAAGAGATTAAGAATGTCTATCAAAGATCTCAACCAACAGATCAGGAGATCAGTGAATTATTGCTCGGCAATAAACAGTTTACCACCGAACAGCTTTTTTATAGATCGCAATCTGTTCCTTTACATCGTATGGTAAATCCTGCGTTAATGTCTCCTATCTCAACGCAACAGTGTCTCTCAAGTTTTCAAAGTCATAGTTTTAATCCATCTACAAGCAGTTCAATAGCTCCTACTCCTGTACCTAGTGAATTCAATGACTTTGGTTCTATAGGTCAATCGGAAGGgacttcttatttattaaatgacgTCGATCCTAACTTTATATCGGACgatcaacaatttttaatgaacGACAAAGAGATTTCAACCGACAATATAACTAATATTCTTAATATCCTGAGCGAAGAGGGATCACAAAGTTTACAGATTTTACCTGAACAGTCTGGTGAAGAAGATTTGATAGATAATAATGGGATAGTTTTAGATACTTTACCTAATTCTAATATCAATTTGTCTGAAGAGGACATGCTAGACTCTTCTAATGTTCTTGATAGTTCGGTGAATGGAGCATTGCAGAAGATCATACAATCTCGTTCTTATCCAAATACACCTCTTCCTGCACCGGTATCAACATATACACCATCTTACGCAGAAGATAGTAATGGTTCAAGATCGTATCCCTCGACACCTTTGCATACAGTTCAATCTCAGGAAGTTTATCAAGAATCTAACGAACCAATGCTCTCAAGTCCTACGTTAAATTCTTTGAATTTACACGGTGACACAACGAGTATTGCAACATCGGATAATGGTTGTAGGAATGTCGCAGATTTACTTGGAACCACCTTCTTAGAAGAGCACGACGGAGAAACAGACGATTTGGATCCTCTTAGCAATTTTGATGGATTGCAAGATGTTGATCCATTGACTCCTTTGTTCAATGAAGTGACAGAGCctaatcgttga
Protein Sequence
MSTDNHDQSKPKPPPSSLPSSSSSSSSSSSSSSSSSSTSSSSSSSTAATTATATATLPPPPPPPPLPPPPAIPPSPSPLSSSSTRNNVPIDEYAFDGTRIKKEQSDTCLENGEGAGASNLSGANSGGGGATSAGVGPGPGGNPAAITKAGINDNKRGPGPTPAPASAAAPTAAGRLSNGFHEGDLLQDIIAAKFTTLANHGSTGKNDKIRLMIEDSVSEESKSRVQEIFSQVEQLKIEEKLLLYLKLPLSLNNTGGTVDPLRQPLNPLGNRYEIHQTIMWIKTHLEEDPEVSLPKQEVYEEYNMYCIRNSMKPLSTADFGKVMKQVYPRVRPRRLGTRGNSRYCYAGMRKRVKLEAPTLPNISGTQTEDGTEENITEEMLGAASTLIREWAENLLGLKFPTLSALARHLVDNVCVDVRSLAAICILSASRKPDTSSNEESTTDLSVTSISGKPGKLREAQIQLQRKLQQREHIKDQKHRHIDNVTLNQSKEKIVDNKAGVNKGSKKVKTNQSPQGTNTPAGQYVLNKHNLPATVTVRQKKVLKASSQACNNVSPESNCDNIVVQSIEDVQNNSSTRVVTTNCVNSKRDVKPKNSRKRANLNVPNQPSESSPEKQTKLAEQQVHENVEHSSMLLPRLSSVQRAGKISVILASNLKPTKCKATEAVSNQPAKNCDIELPICSKNSIKINGCPSNFDSNGNGTETSTLLTKDQLRLLQENSNLISKNDKLCSLDADALDDYLNGGNNSQEQEEELLQYFQQNSSSSSDVEANAITGDTEQISRSDKVSQLRLILEQNLKAGTEHPPIDIVSATIVRQNTVSEKQEVTQTHNLILPTLLNHSNQTNTRRRVSFETNVVEHVQDSNVVANTVPQSPNTRRRIFNFTPISPGPHSPINGRASKSNSANASPFVSPRNTPVPRSRSNLQGGSFRSRASQKSLSRSISCSMPYTGKNDTFVVPTSGPELVRQVSMPQSPLTCTKSSEVQVGGSTTHITITSKQENQGSQCPPFLASDLAPQKQLLINYPSQENLQEIKNVYQRSQPTDQEISELLLGNKQFTTEQLFYRSQSVPLHRMVNPALMSPISTQQCLSSFQSHSFNPSTSSSIAPTPVPSEFNDFGSIGQSEGTSYLLNDVDPNFISDDQQFLMNDKEISTDNITNILNILSEEGSQSLQILPEQSGEEDLIDNNGIVLDTLPNSNINLSEEDMLDSSNVLDSSVNGALQKIIQSRSYPNTPLPAPVSTYTPSYAEDSNGSRSYPSTPLHTVQSQEVYQESNEPMLSSPTLNSLNLHGDTTSIATSDNGCRNVADLLGTTFLEEHDGETDDLDPLSNFDGLQDVDPLTPLFNEVTEPNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01089735;
90% Identity
iTF_01234766; iTF_01234096; iTF_01511943; iTF_01512587; iTF_01514578; iTF_01513907; iTF_01513214; iTF_01232168;
80% Identity
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