Ospi007810.3
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- RFX7
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000078.1:66355-72320[-]
Transcription Factor Domain
- TF Family
- RFX
- Domain
- RFX domain
- PFAM
- PF02257
- TF Group
- Basic Domians group
- Description
- RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-32 8.1e-29 99.8 0.2 3 78 326 401 324 402 0.97
Sequence Information
- Coding Sequence
- ATGCTAAcaagtagtaatagtagtaatagtagtagtagtagtagtagtagcagtagcagtagcagtagcagtagcagcagcagcagcagcagcagcagcagcagcagcagcagaagcagcagcaacagcaccagtagcagtagcagcagcagcagcagcagcagcagcagcagcagtagtagtagtcgtcCAGCTGACTCTGACAAAATGGGTACGATGAGTACTGATAATCATGATCAGTCCAAGCCtaaaccaccaccaccgccgccaccactaccaccgccgccaccgccgctgccgtcgccgccaccaccaGTATCACCGTCAGTATCGGCATCGGCAGCAGCAAcaataccaccaccaccgctaccacctccaccttcgataccgccatcgccatcgccatcgccagCGCCGCTACAACCACCGTCTACGAAGAATAGCGTTCCCGTTGAAGAGTACGCTTTTGACGGAACGCGCATCAAGAAGGAACAAAGTGACACTTGTCTCGAGAACGGTGACGGCGCCGCGGTAACAGCGACGGCGGAGGAGGCGGCGGaggaggcggcggcggcggcggcggcggcggcggcggcggcgNNNNNNNNNNNNNNNAAAGCCGGCATCAACGACAACAAGAGACCGGCGACCACCTCCGCTCCCACTGCCGGTAGACTCTTCAACGGTTTCCACGAAGGCGACCTACTTCAAGACATCATTGCGGCCAAGTTCACGACCCTGGCGAATCACGGCTCTACCGGCAAAAACGACAAGATTCGTCTGATGATCGAGGATAGCGTCAGTGAAGAATCAAAATCACGAATTCAAGAGATATTTTCCCAAGTTGAGCAACTTAAAATAGAGGAAAAATTGTTGCTGTACCTGAAACTCCCATTGTCGTTGAATAACACTGGAGGAACAGTTGATCCATTGAGGCAACCACTAAATCCATTAGGAAATCGTTATGAAATTCATCAAACTATTATGTGGATCAAAACACACTTGGAAGAGGATCCTGAGATTTCCTTACCGAAACAAGAGGTCTACGAAGAATACAACATGTACTGTATAAGGAATTCTATGAAACCACTATCGACTGCAGATTTTGGAAAGGTCATGAAACAAGTCTACCCAAGGGTACGTCCTCGAAGACTAGGCACAAGAGGCAATTCTCGTTATTGCTATGCAGGAATGCGCAAGAGAGTTAAATTGGAAGCCCCAACGCTGCCTAACATATCTGGAACTCAAACTGAGGATGGTATTGAAGAAAATGTTACCGAAGAAATGCTAGGTGCTGCTTCTACTTTGATTAGAGAATGGGCTGAAAGTGTGTTGGGTTTTAAATTTCCAACTTTGAGTGCCTTAGCACGTCATCTGGTGGATAATCTTTGCGTCGATACACGATCCCTAGCCGCCGTATGTATTTTATGTGCTTCCAGGGAACCAGATACTTCAATCAATGAAGAGTCAACAACTGGTCTGCCAGTTACATCAATGTCTGGGAAATCTGGAAAATTAAGAGAGGCACAAATACAATTACAACGTAAGTTACAACAACGAGAACATATAAAAGATCAAAAGCATAGGCACGTTGATAATGTTACACAGAATCATAATAAAGAGAAGATTATTGATAACAAAGCAGGAATAAATAAGGGAAATAAGAAAGTGAAGACCAATCAGTTGCCTCAAGGTACAAATATGCCACCTGGACAATATGTGTTAAGTAAACACAATATACCTGCCACTGTAACAGTGCGGCAAAAGAAGGTTCTCAAAACTAGTAATCAACCCTGCAACAACGTTTCTTCGGAATCCAACTGTGATAATATAGTGGTACAATCGATCGAAGATGTTCAGAACAATAGCAGCACTAGAGTAGTAACGACCAATTGTGTGAATTCAAAGCGAGACGTTAAACCTAAAAATTCCAGAAAGCGTGCCAATCTAAATGTACCAAATCAGCCATCGGAATCCAGTCCTGAGAAACAAACGAAACTTTCAGAACAGCAGGTACATGAGAATGTAGAGCATTCCAGTATGTTGTTACCTAGGCTCTCATCTGTACAACGTGCGGGGAAAATATCAGTGATATTAGCTAGTAACCTGAAGCCTACCAAGTATAAAGCCACAGAGGCTGTTAGTCAGCCTGCCAAAAACTGTGATATTGAATTGCCAACTTGTTCAAAAAATTCCATCAAAATAAATGGTTGTCCCAGTAGTTTTGATTCTAATGGAAATGGAACTGAAACATCGACTCTCTTGACTAAAGATCAACTACGATTATTACAAGAAAATTCAAACCTCATAAGTAAGGGTGATAAACTGTGTTCTCTCGACGCAGATGCATTGGATGATTATTTAAATGGGGGTAATAATTCTCAGGAACAGGAGGAGGAATTGTTGCAGTATTTTCAGCAGAGTAATTCATCTAGTTCAGACGTAGAGGCAAATGCCATTACCGGTGACACTGAGCAAATATCAAGATCGGATAAAGTGTCGCAGCTGAGATTAATATTAGAACAGAATCTAAAAGCTGGTACTGAACATCCACCAGTCGATATAGTATCTGCTACAATTGTTAGGCAAAATGTAGCTAACGAAAAGCAGGAGATTGCTCAAACGCATAATTTAATACTTCCAACATTACTAAATCATTCAAACCAAACAAATACAAGGCGTAGAGTCAGTTTTGAAACAAATGTTGTTGAACACGTACAAGATTCCACTGTTACAAATACTGTACCTCAAAGCCCGAATACGCGTCGTAGGATATTTAATTTCACACCGATATCGCCTGGTCCACATTCACCTATTAATGGTCGTGCTTCCAAATCGAATTCAGCAAACGCAAGTCCCTTTGTTTCACCACGAAATACACCAGTGCCTCGATCACGGAGTAATCTACAAGGTGGCAGTTTTAGATCTCGCGCAAGTCAGAAGTCTTTGTCACGTTCCATATCATGTAGCATGCCCTACACTGGAAAGAGCGATACGTTTGTAGTACCTACGAGTGGTCCTGAGTTAGTGCGGCAAGTGTCGATGCTACAATCACCTCTTACCTGTACAAAGTCATCGGAAGTACAGGTTGGCGGTAGCGCGACACACATTGTTATAACATCGAAGCAAGAAAATCAAGGATCGCAATGCCCTCCATTTTTAGCATCGGATTTGGCGCCGCAAAAACAACTACTTATCAACTACCCGAGCCAGGAAAATTTACAAGAGATTAAGAATGTGTATCAAAGACCGCAACCAACGGATCAGGAAATCAGTGAATTATTGCTTGGTAATAAACAGTTTACTACTGAACAGCTGTTTTATAGATCACAGTCTGTTCCTTTACATCGTATGGTAAATCCTGCATTGATGTCTCCTATTTCAACACAACAGTGTCTCTCAAGTTTTCAAAGTCATAGTTTTAATCCATCTACAAGCAGTTCAATAGCTCCTACTCCTGTACCTAGTGAATTCAATGACTTTGGCTCTATAGGACAGCCAGAAGGgacttcttatttattaaatgacGTTGACCCAAACTTTATATCCGATGATCAACAATTTTTGATGAACGATAAGGAAATTACATCTGAGAACATAACAAATATTCTGAATATCTTAAGCGAAGAAGGATCACAAAGTTTACAGATTCTTCCAGAGCAATCTGGAGAAGAAGATTTGATAGATAATAATGGAATAGTTTTAGATACTTTACcaaattcaaatataaatttatcggAAGAAGATATCTTGGACCCATCGAATGTTCTCGATAATTCAGTGAGCGGGGCATTGCAGAAGATCATACAATCTCGTTCGTATCCAAACACACCTCTTCCTGCACCAGTGTCAACATACACGCCATCTTACACAGAAGACAGTAATGGTTCAAGATCATATCCTTCAACACCTTTGCATACAGTACAATCTCAGAAAGTTTATCAAGAGTCGAACGAACCAATGCTTTCAAGTCCTACATTAAATTCTTTGAATATACATGGAGATACTACGAGTATCGCTACTTCGGATAATGGCTGTAGGAATGTTGCAGACTTACTTGAGACCACCTTCTTAGGGGAGCCTGATGGAGAAGCAGATGATTTGGATCCTCTTAGCAATTTTGATGGCTTGCAAGATGTAGATCCATTGACTCCTTTATTCAATGAAGTGACAGAGCCTAATCGTTGA
- Protein Sequence
- MLTSSNSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSRSSSNSTSSSSSSSSSSSSSSSSSSRPADSDKMGTMSTDNHDQSKPKPPPPPPPLPPPPPPLPSPPPPVSPSVSASAAATIPPPPLPPPPSIPPSPSPSPAPLQPPSTKNSVPVEEYAFDGTRIKKEQSDTCLENGDGAAVTATAEEAAEEAAAAAAAAAAAAXXXXXKAGINDNKRPATTSAPTAGRLFNGFHEGDLLQDIIAAKFTTLANHGSTGKNDKIRLMIEDSVSEESKSRIQEIFSQVEQLKIEEKLLLYLKLPLSLNNTGGTVDPLRQPLNPLGNRYEIHQTIMWIKTHLEEDPEISLPKQEVYEEYNMYCIRNSMKPLSTADFGKVMKQVYPRVRPRRLGTRGNSRYCYAGMRKRVKLEAPTLPNISGTQTEDGIEENVTEEMLGAASTLIREWAESVLGFKFPTLSALARHLVDNLCVDTRSLAAVCILCASREPDTSINEESTTGLPVTSMSGKSGKLREAQIQLQRKLQQREHIKDQKHRHVDNVTQNHNKEKIIDNKAGINKGNKKVKTNQLPQGTNMPPGQYVLSKHNIPATVTVRQKKVLKTSNQPCNNVSSESNCDNIVVQSIEDVQNNSSTRVVTTNCVNSKRDVKPKNSRKRANLNVPNQPSESSPEKQTKLSEQQVHENVEHSSMLLPRLSSVQRAGKISVILASNLKPTKYKATEAVSQPAKNCDIELPTCSKNSIKINGCPSSFDSNGNGTETSTLLTKDQLRLLQENSNLISKGDKLCSLDADALDDYLNGGNNSQEQEEELLQYFQQSNSSSSDVEANAITGDTEQISRSDKVSQLRLILEQNLKAGTEHPPVDIVSATIVRQNVANEKQEIAQTHNLILPTLLNHSNQTNTRRRVSFETNVVEHVQDSTVTNTVPQSPNTRRRIFNFTPISPGPHSPINGRASKSNSANASPFVSPRNTPVPRSRSNLQGGSFRSRASQKSLSRSISCSMPYTGKSDTFVVPTSGPELVRQVSMLQSPLTCTKSSEVQVGGSATHIVITSKQENQGSQCPPFLASDLAPQKQLLINYPSQENLQEIKNVYQRPQPTDQEISELLLGNKQFTTEQLFYRSQSVPLHRMVNPALMSPISTQQCLSSFQSHSFNPSTSSSIAPTPVPSEFNDFGSIGQPEGTSYLLNDVDPNFISDDQQFLMNDKEITSENITNILNILSEEGSQSLQILPEQSGEEDLIDNNGIVLDTLPNSNINLSEEDILDPSNVLDNSVSGALQKIIQSRSYPNTPLPAPVSTYTPSYTEDSNGSRSYPSTPLHTVQSQKVYQESNEPMLSSPTLNSLNIHGDTTSIATSDNGCRNVADLLETTFLGEPDGEADDLDPLSNFDGLQDVDPLTPLFNEVTEPNR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01233384; iTF_01511943; iTF_01232168; iTF_01512587; iTF_01234766; iTF_01234096; iTF_01514578; iTF_01513907; iTF_01513214;
- 90% Identity
- -
- 80% Identity
- -