Basic Information

Insect: Polistes dominula
Gene Symbol: -
Assembly: GCA_001465965.1
Location: NW:781695-790043[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.094 5.6 6.8 0.4 2 23 134 155 133 156 0.94

2 17 3.7 2.2e+02 1.7 3.7 1 23 162 184 162 184 0.97

3 17 0.023 1.4 8.7 0.5 2 23 190 211 189 211 0.97

4 17 0.0074 0.44 10.2 2.0 2 21 488 507 487 508 0.95

5 17 1.5 92 2.9 1.0 1 23 575 597 575 597 0.82

6 17 0.95 57 3.6 1.3 2 23 777 798 776 798 0.95

7 17 6.3 3.8e+02 1.0 0.2 3 23 815 835 813 835 0.92

8 17 0.015 0.89 9.3 0.3 1 23 843 865 843 865 0.98

9 17 0.018 1.1 9.0 1.0 2 23 962 983 961 983 0.96

10 17 0.19 11 5.8 0.7 1 23 993 1015 993 1015 0.97

11 17 0.0028 0.17 11.5 0.1 1 23 1092 1114 1092 1114 0.97

12 17 0.024 1.4 8.6 0.3 1 23 1190 1212 1190 1212 0.97

13 17 2.5e-05 0.0015 18.0 1.2 1 23 1218 1240 1218 1240 0.97

14 17 0.0036 0.21 11.2 2.6 1 23 1291 1313 1291 1313 0.97

15 17 0.00058 0.035 13.7 1.7 1 23 1319 1341 1319 1341 0.99

16 17 0.13 8 6.3 0.6 2 23 1447 1468 1446 1468 0.97

17 17 1.6 98 2.8 0.2 2 23 1476 1497 1476 1497 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.094	5.6	6.8	0.4	2	23	134	155	133	156	0.94
2	17	3.7	2.2e+02	1.7	3.7	1	23	162	184	162	184	0.97
3	17	0.023	1.4	8.7	0.5	2	23	190	211	189	211	0.97
4	17	0.0074	0.44	10.2	2.0	2	21	488	507	487	508	0.95
5	17	1.5	92	2.9	1.0	1	23	575	597	575	597	0.82
6	17	0.95	57	3.6	1.3	2	23	777	798	776	798	0.95
7	17	6.3	3.8e+02	1.0	0.2	3	23	815	835	813	835	0.92
8	17	0.015	0.89	9.3	0.3	1	23	843	865	843	865	0.98
9	17	0.018	1.1	9.0	1.0	2	23	962	983	961	983	0.96
10	17	0.19	11	5.8	0.7	1	23	993	1015	993	1015	0.97
11	17	0.0028	0.17	11.5	0.1	1	23	1092	1114	1092	1114	0.97
12	17	0.024	1.4	8.6	0.3	1	23	1190	1212	1190	1212	0.97
13	17	2.5e-05	0.0015	18.0	1.2	1	23	1218	1240	1218	1240	0.97
14	17	0.0036	0.21	11.2	2.6	1	23	1291	1313	1291	1313	0.97
15	17	0.00058	0.035	13.7	1.7	1	23	1319	1341	1319	1341	0.99
16	17	0.13	8	6.3	0.6	2	23	1447	1468	1446	1468	0.97
17	17	1.6	98	2.8	0.2	2	23	1476	1497	1476	1497	0.91

Sequence Information

Coding Sequence: ATGTCAGGAAGACCGCCTCGTTTGCGGGCACTTCGACCTCGAccacagcagcagcagcagcaacagcagcagcagcagcagcaagttAAAACGGATGTAACGCAAAAGATGATTACCGATTTGGAAGATAATGAAGCGGAAAGTGAAACGAAAAATGATCCTGTTAATAATCAACTCAAGGAAGATAAGGAAATCGGAGAATCTTATAATAACGATGATCACCAGATGGAAAATCAAAATGTTAATGGCAAAGATTTTTCTACCTTGGAATTGTTTAACATGAATGACATCAATGAAGAAGAATCCTTGAAGGATCAATCAGACGTTAATGTTTATTTGGAACAAGTGAAAAAGGAACATCAACAAATGAACAAAAGCGTTCATGATACAAGTGAAAATCAATGTCCTATGTGCCCTTATGATGCACTATCTTCACGTGATCTGGAAACTCATCAACGAGTACATCATTTAAAACGAAAATTCTTTCGTTGTGCTAAGTGCTCTTATGTTACGCATGTGCGAGCACGTTATACAAAGCATGTCAAATATCACTCCATGCCAATGATCAAGTGCGATGCCTGTGATTTTAGAACACCATATaagTGGAACTTGGATCGACATACACGTAATCATGGTGGCGGAGGAACTTTTCAATGTAGAGCATGTAATTTTACCGCTGATATTCGACAAAGTTTAACGGTGCATGAGACCAACCATCATGAGCCTCCAGTAGGTCAATCCAGTCGCAGAAGCAATATGCCATTTGAACGTAAACCACGCAATAGTCCAAAACGTTACAATCAGGTTGGTGCAAGTGATTTTCGGGAACCTATCAGTGCGACTGGAAATACTACAGCTATTAATCTTGGGGAATCTTTCAATACCGATCAATCAATTGACGATAAGAAAAGTGTACTTGCAGGTGCGGATTGCATACCTTTAAAATGTGAAGAGAAAGCTTGTCAGTTTGTAACATCTTGGGATTCTGAAATGCAACGTCACTTGGCAGAATGTCATGCGCCAATTGCCTTGAACAAATCAAGAAAACCACTGCCAATGTTAATTCCATTAAATCCACTTAACAATAAATCTAATACTGTATTAAATAGTAATACATCAACAACATTGTTAAAAGTTCCACGCGTTAGAGTGAGACCTGAACTTGCCCAAATTGCAAGAGATACCGAAATGGCTAAATTGTATGGGAATAAAGAGataaactCTAAGAAGAATGTTAATAGCATAGTAAAtgcatttgaaagaaaaaatgcctCCTTTTTTGATAAACTTAAAGAGAAATTATCATCATCAGTGGCCATGAACAAAGGGATGCCAGAGGTAGCTGTAAGTAACATGATCGATCTGAAATGTTGGTGTACATTTAAAGCTAGTAGCATGGAAGAACTGGCTTCTCACAAACAAACACACCACACTGCTCTCAGTGTATCTGTGGGCATGTCACGTTGTCCTAAGTGCAGGAGACGTTGCAAGAGTACAACTGATCTCGAAATACACATGCAGTATTGTCAGCAAACGAGCAGCGAGTCACCGGTTGATAGTAGTTTTGAGAAGGTTACTGAGCGCTCGGAACTTCGCATGACTGCATACAGTAGTGAATATACGTTTCCTTCTCATTTGGAATGGGACACCAGTCTTGGAGGGCACAATTCTTCTGGATCTTCGGTCGAGGGAACTTCTGCGCATCCAAATGGACGACGAGTATTCAAGTGTCCTCATTGCCCATTTTGGGCATCAACTGCAAGTCGTTTTCATGTGCACATAGTTGGTCATTTAAATAGGAAACCGTTCGAGTGTTCTCTCTGCGCATATCGTTCTAATTGGAGATGGGATATTACAAAGCATATTAAGCTTAAAGCAGCTAAAGATCCGGTGCATTTGACTGCTAGAGTACTTATGACTGATGAAACAGGTCGacgaaattattcgaaatataacaaatacctTGCACAGGTTGAGCAACAAGTATGGGATGATCAAAATATGGAGGAAAGAAGTATAGAAGAAGTAAACTTAAGTGAACCTCCAACCAAGGTGttaattttaagtaataaAGATTACTCGCAGACCGCTGAAATTCCTTCTTCCATTGATTCTAAGTTAATAACAAATGATGACAATTGCAATGAAAACATCATATCTTTAAGACATCCGCCTCCGTTGAAAGTTGCCGTTAAAAATCGTGGACAATCTttgcttaaaaataataccactAATGTACACAATTCAAGTATATCTATCTCGACTTCTACGACCTCACCAACAAATACTACAACAATAACTATGGACGATAGTAAGCGTACTATGTGGAAATGTAAGAAATGTAATTACAAAGATTCTAATAAGGATACAGTTCTGTTGCACGTAAAATCTCATTATGAAGCCATTGATCAAAATGCCAATGAAGAAAGAAACATCTACGGCTGTGGAGATTGTCCATTTTCTGCGGCAGATACAGTATCTTTATCAATGCATAGAGTGCATCATCGTCCAAATAATACtgcaatatttaaatgttatcttTGCCCATATTACGTTAATACAAAAGCTGAGTTATTGGATCATGCAAGACTTCATGGGGAGGAATTAGCAGTTGTACATCAACAGAATATGGATTTTCGCATGCCTGTTTTAAAATCCAAGTTACAGAATATAAATTCTGAAGATGGTGATaacaatataaagaaagaaactaccatagaacaaaatattccTACTACGTCAAAAAACAATGGAACATCTTTATCGAGCGTACCATCGACAAgttcgaatagaaaaaatccTGTTCTTTTGGACACCCGTCACCTTCCCGAAGCACCATTAGTGTGGGTAACGAGACCAGACGGTACCTtagttaaaatgttaaaatgtcGATACTGTCCATATGTGACTTCCCGTCGTGCGGAAGTTTGCGATCATGAGATGATGCACGTTGATTATCCAAGTCAAGATCCCTTTTTTACCTGTGATAATTGCAGTTACACTAGTGCGCATAGAGAAGTAATGAACGCCCATGTGGATATGCATTCGGGTTCTTTAGGTATTGTTCACTGCCTTGTCGATCAAGCGCGATCGGATTCACAACAGCTTAATGATTTGTTGGCATTACTAAATCTTACACATATGCCAGCCTTGGGAGCTGAACCGGATCTGCGTGATCTGAGATTAGTATATTGTTGTGGTAAATGTCCAGCACGATTTCTCTGTGAAAAAGAATTGAGAATACATCTGCGTTATCATATGACCGAGTTAGCTTACATGTGCCAGTGGTGTTCGTATGCAGCACGCCAGCCAGCACACCTTGTTGCTCATCAGAAAGCACACTCTACAGAATATCAAGAACGTACTAAATATTTGTTGACTTTGCACGGCTATTCTCAAAGATTTCCACCTCCTCCAACTGCATGTGTCGAAGCCAGCGATCAAGAATTCAACGACACGTCTAATAACGTCGCATGGATCGTAATTAAAGTATCTGATGATTCATCCTATTCAACGaattcttcctcttttacGGGGACGTCTGGTCAACGATCCAACAATCAAGTGTTCACCTGTGCTAAGTGTCCAGCacgatatttcaaattagatgCTTTAGAATATCACATGACTTTGCATGGATCTAACAATCGTTACAAATGTTCTGAATGCGATTACTCGTCGAAAACATtgcaaaatttaacaaaacatCAAGTGGTACATCGAAGGCATAACGAAACCAATGGCATGGCCTCATCTAACTCTTCCACCTCGACATCTCCACCTGATCCTCAATTCGGTGTATTTATGCGTGGTAATCCTAATTTCGTTTATCCAGGTTATTTACGTAACGGTAGATTAAAGGAAAAACGTTACAAATGTCATAAGTGTCCGTCAGCGTTTGAAAAACGTGAACAGTATAGAGTACACTTGACATTGCATGGCGCTAAGCAACGATATCGGTGTGATACTTGTGATTACTCCGTCAAATATTATGCAAATTATATTCAACATCTAAAGAAACATCAGGCTAATGCTGAGGCACAAGCATCTAGACGACGATTAGAGGATGACACTATATCGGTTGACAGCGATGGTATCACTGATCTTTCCGTGTCGAACTTTCGTTCTGGTAAAACAATTGGATCTGGTACAACAGCGGCATCCGTTACGACAATTTCTATGTCAACCATAAATACAATAGCCGGTAGCGGTGGTATAACTTCTATTTCGACTCCATTGAATTCCATGCATGTTTCCAATCAAGACAAACAGGCATTGATATTGATGCAGAAGAAAGGAATGTTATCGTCATCGAATGAAATTGATACCGAAATAATTCGTTGCCAGAATTGTCCGTTTTCGACAACCGATAAGGAAGTCATGGATGCTCACAAAAGACGTCACGGGATTGAACGGATGACACCATCCTGTCCACATTGCGATTATATTCCTCGAAGGGATGAAAACGTGGGCGAACATATCAGATTACATTTTACCCGACTATACAAGCCTGAATCTTATCTCATCATAGAGTTGCTCACTTTAACGATGAGAAAGGTTGCTGTTAACGGGAAAGAAGatcagaaaaagaataatgtggaattactttttaaagagTGTCCTGATGGAAGATTCTTTCCTCTAACAGACGGAAATTCCGGCTCGTTTAACGTCAATGCGtctcatattaataattgtaaggaGAAAGTTATAGTAGATCCAAATACGGGAGAGACCAAGCAAcgcttttttgtttaa
Protein Sequence: MSGRPPRLRALRPRPQQQQQQQQQQQQQVKTDVTQKMITDLEDNEAESETKNDPVNNQLKEDKEIGESYNNDDHQMENQNVNGKDFSTLELFNMNDINEEESLKDQSDVNVYLEQVKKEHQQMNKSVHDTSENQCPMCPYDALSSRDLETHQRVHHLKRKFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGGGTFQCRACNFTADIRQSLTVHETNHHEPPVGQSSRRSNMPFERKPRNSPKRYNQVGASDFREPISATGNTTAINLGESFNTDQSIDDKKSVLAGADCIPLKCEEKACQFVTSWDSEMQRHLAECHAPIALNKSRKPLPMLIPLNPLNNKSNTVLNSNTSTTLLKVPRVRVRPELAQIARDTEMAKLYGNKEINSKKNVNSIVNAFERKNASFFDKLKEKLSSSVAMNKGMPEVAVSNMIDLKCWCTFKASSMEELASHKQTHHTALSVSVGMSRCPKCRRRCKSTTDLEIHMQYCQQTSSESPVDSSFEKVTERSELRMTAYSSEYTFPSHLEWDTSLGGHNSSGSSVEGTSAHPNGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHLTARVLMTDETGRRNYSKYNKYLAQVEQQVWDDQNMEERSIEEVNLSEPPTKVLILSNKDYSQTAEIPSSIDSKLITNDDNCNENIISLRHPPPLKVAVKNRGQSLLKNNTTNVHNSSISISTSTTSPTNTTTITMDDSKRTMWKCKKCNYKDSNKDTVLLHVKSHYEAIDQNANEERNIYGCGDCPFSAADTVSLSMHRVHHRPNNTAIFKCYLCPYYVNTKAELLDHARLHGEELAVVHQQNMDFRMPVLKSKLQNINSEDGDNNIKKETTIEQNIPTTSKNNGTSLSSVPSTSSNRKNPVLLDTRHLPEAPLVWVTRPDGTLVKMLKCRYCPYVTSRRAEVCDHEMMHVDYPSQDPFFTCDNCSYTSAHREVMNAHVDMHSGSLGIVHCLVDQARSDSQQLNDLLALLNLTHMPALGAEPDLRDLRLVYCCGKCPARFLCEKELRIHLRYHMTELAYMCQWCSYAARQPAHLVAHQKAHSTEYQERTKYLLTLHGYSQRFPPPPTACVEASDQEFNDTSNNVAWIVIKVSDDSSYSTNSSSFTGTSGQRSNNQVFTCAKCPARYFKLDALEYHMTLHGSNNRYKCSECDYSSKTLQNLTKHQVVHRRHNETNGMASSNSSTSTSPPDPQFGVFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRRLEDDTISVDSDGITDLSVSNFRSGKTIGSGTTAASVTTISMSTINTIAGSGGITSISTPLNSMHVSNQDKQALILMQKKGMLSSSNEIDTEIIRCQNCPFSTTDKEVMDAHKRRHGIERMTPSCPHCDYIPRRDENVGEHIRLHFTRLYKPESYLIIELLTLTMRKVAVNGKEDQKKNNVELLFKECPDGRFFPLTDGNSGSFNVNASHINNCKEKVIVDPNTGETKQRFFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01513756;
90% Identity: iTF_01234633; iTF_01232647; iTF_01235311; iTF_01233950;
80% Identity: -