Basic Information

Insect: Polistes metricus
Gene Symbol: -
Assembly: GCA_010416925.1
Location: QUOH01000001.1:15641265-15651761[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.12 8.3 6.8 0.4 2 23 127 148 126 149 0.94

2 17 4.7 3.2e+02 1.8 3.7 1 23 155 177 155 177 0.97

3 17 0.014 0.95 9.7 0.4 2 23 183 204 182 204 0.97

4 17 0.0081 0.56 10.5 2.0 2 21 481 500 480 501 0.95

5 17 2 1.4e+02 2.9 1.0 1 23 568 590 568 590 0.82

6 17 1.2 84 3.6 1.3 2 23 771 792 770 792 0.95

7 17 3.1 2.1e+02 2.3 0.3 3 23 809 829 807 829 0.93

8 17 0.019 1.3 9.3 0.3 1 23 837 859 837 859 0.98

9 17 0.023 1.6 9.0 1.0 2 23 956 977 955 977 0.96

10 17 0.24 16 5.8 0.7 1 23 987 1009 987 1009 0.97

11 17 0.0021 0.14 12.3 0.1 1 23 1086 1108 1086 1108 0.97

12 17 0.031 2.1 8.6 0.3 1 23 1184 1206 1184 1206 0.97

13 17 2.4e-05 0.0017 18.4 1.0 1 23 1212 1234 1212 1234 0.97

14 17 0.0046 0.32 11.2 2.6 1 23 1285 1307 1285 1307 0.97

15 17 0.00075 0.052 13.7 1.7 1 23 1313 1335 1313 1335 0.99

16 17 0.021 1.4 9.2 0.5 2 23 1441 1462 1440 1462 0.97

17 17 2.1 1.5e+02 2.8 0.2 2 23 1470 1491 1470 1491 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.12	8.3	6.8	0.4	2	23	127	148	126	149	0.94
2	17	4.7	3.2e+02	1.8	3.7	1	23	155	177	155	177	0.97
3	17	0.014	0.95	9.7	0.4	2	23	183	204	182	204	0.97
4	17	0.0081	0.56	10.5	2.0	2	21	481	500	480	501	0.95
5	17	2	1.4e+02	2.9	1.0	1	23	568	590	568	590	0.82
6	17	1.2	84	3.6	1.3	2	23	771	792	770	792	0.95
7	17	3.1	2.1e+02	2.3	0.3	3	23	809	829	807	829	0.93
8	17	0.019	1.3	9.3	0.3	1	23	837	859	837	859	0.98
9	17	0.023	1.6	9.0	1.0	2	23	956	977	955	977	0.96
10	17	0.24	16	5.8	0.7	1	23	987	1009	987	1009	0.97
11	17	0.0021	0.14	12.3	0.1	1	23	1086	1108	1086	1108	0.97
12	17	0.031	2.1	8.6	0.3	1	23	1184	1206	1184	1206	0.97
13	17	2.4e-05	0.0017	18.4	1.0	1	23	1212	1234	1212	1234	0.97
14	17	0.0046	0.32	11.2	2.6	1	23	1285	1307	1285	1307	0.97
15	17	0.00075	0.052	13.7	1.7	1	23	1313	1335	1313	1335	0.99
16	17	0.021	1.4	9.2	0.5	2	23	1441	1462	1440	1462	0.97
17	17	2.1	1.5e+02	2.8	0.2	2	23	1470	1491	1470	1491	0.91

Sequence Information

Coding Sequence: ATGTCAGAAAGACCGCCTCGTTTGCGGGCACTTCGACCTCGAccacagcagcagcagcagcaagttAAAACGGATATAACGCAAAAGATGATTACCGATTTGGAAGATAATGAAGCGGAAAGTGAAACGAAAAATGATCCTGTTAATAATCAACTCAAGGAAGATAAGAAAATCGGAGAATCTTATAGTAACGATGATCACcagatgaaaaatcaaaatgttAATGGCAAATCTTTTTCTACTCTGGAATTATTTAACATGAaagacatcaatgaagaaGAATCCTTGAAGGATCAATCGGACTTTAATGTTTATTTGGAGCAAGTGAAAAAGGAACATCAACAAATGAACAAAAGCGTTCATGATACAAGTGAAAATCAATGTCCTATGTGCCCTTATGATGCATTATCTTCACGTGATCTGGAAACTCATCAACGAGTACATcatttaaaacgaaaattcTTTCGTTGTGCTAAGTGCTCTTATGTTACGCATGTGCGAGCACGTTATACAAAGCATGTCAAATATCACTCCATGCCAATGATCAAGTGCGATGCCTGTGATTTTAGTACACCATATAAgTGGAACTTGGATCGACATACACGTAATCATGGTGGTGGAGGGGCCTTTCAATGTAGAGCATGTAATTTTACCGCTGATATTCGACAAAGTTTAACGGTGCATGAGACCAACCATCACGAGCCTCCAGTAGGTCAATCCAATCGCAGAAGCAATATGCCATTTGAACGTAAACCACGCAATAGTCCAAAACGTTATAATCAGGTTGGTGCAAGTGATTTTCGGGAACCTACCAGTGCAACTGGAAATACTACAGCTATTAATCTTGGGGAATCTTTCAATACCGATCAATCAATTGACGATAAGAAAAGTGTACTTGCAGGTGTGGATTGCATTCCTTTAAAATGTGAAGAGAAAGCTTGTCAGTTTGTAACATCTTGGGATTCTGAAATGCAACGTCACTTGGCAGAATGTCACGCGCCAATTGCTTTGAACAAATCAAGAAAACCATTGCCAATGTTAATTCCATTAAATCCAGTGAACAATAAATCTAATACTACATTAAATAGTAATACACCAGCTACATTATTAAAAGTTCCACGTGTTAGAGTGAGACCTGAACTTGCTCAAATTGCAAGAGATACTGAAATGGCTAAATTGTATGGGAATAAAGAGataaactCTAAGAAGAATGTTAATAGCGTAGTAAAtgcatttgaaagaaaaaatgcctCCTTTTTTGAtaaacttaaagaaaaattatcatcGTCAGTGGCCATGAACAAAGGGATGCCAGAGGTAGCTGTAAGTAACATGATTGATCTGAAATGTTGGTGTACATTTAAAGCTAGTAGCATGGAAGAACTGGCTTCTCACAAACAAACACACCACACTGCTCTCAGTGTATCTGTGGGCATGTCACGTTGTCCTAAGTGCAGGAGACGTTGCAAGAGTACAACTGATCTTGAAGTACACATGCAGTATTGTCAGCAAACAAGCAGAGAATCACCGGTTGATAGTAGTTTTGAGAAGGTTACTGAGTGCTCGGAACTTCGCATGACTGCATACAGTAGTGAATATACGTTTCCTTCTCATTTGGAATGGGACACCAGTCTTGGAGGGCACAATTCTTCTGGATCTTCGGTCGAGGGAACTTCTGCGCATCCAAATGGACGACGAGTATTCAAGTGTCCTCATTGCCCATTTTGGGCATCAACTGCAAGTCGTTTTCATGTGCACATAGTTGGTCATTTAAATAGGAAACCGTTCGAGTGTTCTCTCTGCGCATATCGTTCTAATTGGAGATGGGATATTACAAAGCATATTAAGCTTAAAGCAGCTAAAGATCCGGTGCATTTGACTGCTAGAGTACTTATGACTGATGAAACAGGTCGacgaaattattcgaaatataacaaataccTTGCACAGGTTGAGCAACAAGTATGGGATGATCAAAATATGGAGGAAAGAAGTATAGAAGAAGTAAACTTTAGTGAGCCTCCAACCAAGGTGTTAATTCTGAGTAACAAAGATTACTCGCAGACTGCTGAACTTCCTTCTTCCGTTGATTCTAAGTTAATAACAAATGATGACAATCGCAATGAAAACATCATATCTTTAAGACATCCACCTCCGTTGAAAGTTTCCGTTAAAAATCGCGGACAATCTttgcttaaaaataataccaCTAATGTACAAAATTCAAGTATATCTATCTCGAACTCTACAACGGTATCACCAACAAACACTACAACAATAACTATGGATGATAACAAGCGTACTATGTGGAAATGtaagaaatgtaattataaagaTTCTAATAAGGATACAGTTCTGTTGCACGTAAAGTCTCATTATGAAGCCATTGATCAAAATGCCAATGAAGAAAGGAACATCTATGGCTGTGGAGATTGTCCATTTTCTGCATCAGATACAGTATCTTTATCAATGCATAGAGTGCATCATCGTCcaaataataatgcaatatttaaatgttatcttTGTCCATATTACGTTAATACAAAAGCTGAGTTATTGGAACATGCAAGACTTCATGGAGAGGAATTAGCAGTTGTACATCAACAGAATATGGATTTTCGCATGCCTGTTTTAAAGTCCAAGTTACAGACTACAAATTCTGAAGACGgtgataataatataaagaaagaaactaccatagaacaaaatattccTACTACGTCAAAAAGCAATGGAGCATCCTTATCGAGCGTACCAACAACAaattcgaatagaaaaaatccTGTTCTTTTGGACACCCGTCACCTTCCCGACGCGCCATTGGTGTGGGTAACGAGACCAGACGGTAccttaattaaaatgttaaaatgtcGATACTGTCCATATGTGACTTCTCGTCGTGCGGAAGTTTGCGATCACGAGATGATGCACGTTGATTATCCAAGTCAAGATCCCTTCTTTACTTGTGATAATTGTAGTTACACTAGTGCACATAGAGAAGTGATGAACGCCCACGTGGATATGCATTCGGGTTCTTCAGGTATTGTTCACTGCCTTGTCGATCAAACGCGATCGGATTCACAACAGCTTAATGATTTGTTGGCATTACTTAATCTTACACATATGCCAGCCTTGGGAGCTGAACCGGATCTACGTGATTtgagattagtatattgttgTGGTAAATGTCCAGCACGATTTCTCTGTGAAAAAGAATTGAGAATACATCTGCGTTATCATATGACCGAGTTAGCTTACATGTGCCAGTGGTGTTCGTATGCAGCACGCCAGCCAGCTCATCTTATTGCCCATCAGAAAGCACATTCTACAGAATATCAAGAACGtactaaatatttgttaacttTGCATGGCTATTCTCAAAGATTTCCACCTCCTCCAACTGCATGTGTTGAAGCTAGCGATCAAGAATTCAACGACACTTCTAATAACGTCGCATGGATCGTAATTAAAGTATCTGAAGATTCATCCTATTCAACaaactcttcctctttttcggGGATGTCTGCTCAACGATCCAACAATCAAGTGTTCACCTGTGCTAAGTGTCCAGCACGATATTTCAAATTAGATGCTTTAGAATACCACATGACTTTACATGGATCTAACAATCGTTTCAAATGTTCCGAATGCGATTACTCATCGAAAACAtcgcaaaatttaataaaacatcaaGTGGTACATCGAAGGCATAACGAAACCAACGGCATGGCCTCGTCTAACTCTTCCACCTCGACATCTCTACCTGATCCCCAATTCGGTGTATTTATGCGTGGTAATCCTAATTTCGTTTATCCAGGTTATTTACGTAATGGTAGATTAAAGGAAAAACGTTACAAATGTCATAAGTGCCCGTCAGCGTTTGAAAAACGCGAACAGTATAGAGTTCACTTGACGTTGCATGGCGCCAAGCAACGATATCGGTGTGATACTTGTGATTACTCTGTCAAATATTACGCAAATTATATTCAACATTTAAAGAAACATCAGGCTAATGCGGAAGCACAAGCATCTAGACGACGATTAGAGGATGACACTATATCGGTTGACAGCGATGGTATCACCGATCTTTCCATGTCGAACTTTCGTTCTGGTAAAACAATTGGATCTGGTACAGCAGCGGCATCTGTTACGACAATTTCTATGTCAACCATAAATACAATAGCCGGTAGTGGCGGTATAACTTCTGTTTCGACTCCATTGAATTCTATGCACGTTTCCAATCAAGATAAACAGGCATTGATATTAATGCAGAAAAAAGGAATGTTACCGTCATCGAACGAAAttgatattgaaataattcgttGCCAGAATTGTCCGTTTTCAACAACTGATAAGGAAGCCATGGATGCTCATAAAAGACGTCACGGAATTGAACGGATGACACCATCCTGTCCACACTGCGATTATATTCCTCGAAGGGATGAAAACGTGGGCGAACATATCAGATTGCATTTCACCCGACTATACAAGCCTGAGTCTTATCTTATCATAGAGTTGCTTACTTTAACGATGAGAAAGGTTGCTGTTAACGGGAAAGAAGatcagaaaaagaataatatggAATTACTTTTTAAAGAGTGCTCCGATGGAAGATTCTTCCCTCTAACAGACGGAAATTCCAGCTCGTTTAACGTTAATGCGTcgcatattaataattgtaaagaGAAAGTTATAGTAGATCCAAATACGGGAGAAACCAAGCAAcgcttttttgtttaa
Protein Sequence: MSERPPRLRALRPRPQQQQQQVKTDITQKMITDLEDNEAESETKNDPVNNQLKEDKKIGESYSNDDHQMKNQNVNGKSFSTLELFNMKDINEEESLKDQSDFNVYLEQVKKEHQQMNKSVHDTSENQCPMCPYDALSSRDLETHQRVHHLKRKFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFSTPYKWNLDRHTRNHGGGGAFQCRACNFTADIRQSLTVHETNHHEPPVGQSNRRSNMPFERKPRNSPKRYNQVGASDFREPTSATGNTTAINLGESFNTDQSIDDKKSVLAGVDCIPLKCEEKACQFVTSWDSEMQRHLAECHAPIALNKSRKPLPMLIPLNPVNNKSNTTLNSNTPATLLKVPRVRVRPELAQIARDTEMAKLYGNKEINSKKNVNSVVNAFERKNASFFDKLKEKLSSSVAMNKGMPEVAVSNMIDLKCWCTFKASSMEELASHKQTHHTALSVSVGMSRCPKCRRRCKSTTDLEVHMQYCQQTSRESPVDSSFEKVTECSELRMTAYSSEYTFPSHLEWDTSLGGHNSSGSSVEGTSAHPNGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKAAKDPVHLTARVLMTDETGRRNYSKYNKYLAQVEQQVWDDQNMEERSIEEVNFSEPPTKVLILSNKDYSQTAELPSSVDSKLITNDDNRNENIISLRHPPPLKVSVKNRGQSLLKNNTTNVQNSSISISNSTTVSPTNTTTITMDDNKRTMWKCKKCNYKDSNKDTVLLHVKSHYEAIDQNANEERNIYGCGDCPFSASDTVSLSMHRVHHRPNNNAIFKCYLCPYYVNTKAELLEHARLHGEELAVVHQQNMDFRMPVLKSKLQTTNSEDGDNNIKKETTIEQNIPTTSKSNGASLSSVPTTNSNRKNPVLLDTRHLPDAPLVWVTRPDGTLIKMLKCRYCPYVTSRRAEVCDHEMMHVDYPSQDPFFTCDNCSYTSAHREVMNAHVDMHSGSSGIVHCLVDQTRSDSQQLNDLLALLNLTHMPALGAEPDLRDLRLVYCCGKCPARFLCEKELRIHLRYHMTELAYMCQWCSYAARQPAHLIAHQKAHSTEYQERTKYLLTLHGYSQRFPPPPTACVEASDQEFNDTSNNVAWIVIKVSEDSSYSTNSSSFSGMSAQRSNNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCSECDYSSKTSQNLIKHQVVHRRHNETNGMASSNSSTSTSLPDPQFGVFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRRLEDDTISVDSDGITDLSMSNFRSGKTIGSGTAAASVTTISMSTINTIAGSGGITSVSTPLNSMHVSNQDKQALILMQKKGMLPSSNEIDIEIIRCQNCPFSTTDKEAMDAHKRRHGIERMTPSCPHCDYIPRRDENVGEHIRLHFTRLYKPESYLIIELLTLTMRKVAVNGKEDQKKNNMELLFKECSDGRFFPLTDGNSSSFNVNASHINNCKEKVIVDPNTGETKQRFFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01513756;
90% Identity: iTF_01233275;
80% Identity: -