Pcan008304.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polistes canadensis
Gene Symbol
Ipp
Assembly
GCA_001313835.1
Location
NW:884264-888686[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.8e-30 8.5e-28 95.8 0.0 1 109 127 233 127 234 0.94

Sequence Information

Coding Sequence
ATGTCATCTTCAATACGTGATAAACTTATTTccaagataaagatagatgaCATATGTAAGTACATGAGAGTTGGagttaataaatcatttaattggAGTGAAAATGCGGCGGTAGTGATGCGTTTAAAGGGGAAAAATAACGCTAAgtcgtttcatagcgtctatAAGGTGCTTTCTCGTATATGCCGTAAGTACATCTATGgAACAGTGGACAAAGTTCAACTTGATGGTTTCATGGCTGATGGTGCAGTACCGCCATTAAAGAATGGACACAACTCTAATAATATGGGATTTGCTACACAACCTGTAAGCCCAACTTCAGATGCCACTAGTACTGTATACGCAGTTGGACAATATGCCCCTAAAGTTTTGAGAAATTTAAATGGCCAACGATTAAAGAATCAGTTCACTGATGTCGGCCTTGTTGCCGATGGTAGCATCATTCATGCACATAGATCAGTTCTCGCAGCAGGAAGCGCTTATTTCAATGCTATGTTTACTGGTGGCCTTGTCGAAGAACAACAAGAATTGGTGGAAATTCATTCTATATCAGCTTCTATCCTTTCGCTTTTAATAGACTTTATCTATACCGGAAATGTTGATATTACTGAAGATAATGTTCAAGAATTGTTTGCGGCAGCTGATATGCTTGAATTGGACGAAGTAGTTTCTGGTTGCATTACTTACTTAGAACAACAACTTCATTATTCTAATGCCCTTGGAATTTATAGGTTTGCAGAAGCACACAATAGGTTGGATCTATTAGAGACTGCCTTACGCTTTATACAAGTCAATTTTCCTCAAGTTTCTCAAGAAGAGGAGTTTTTAGACCTGCCCAAAGAGCATCTTGTTCGCTTTCTCAGCAGTGATTTAATTCATATCGACACTGAATTTCAGGTCTTCCAAGCTGCATACAATTGGATTATTCATGATATACCTGCACGACGCTGCTATGTCTTTGAAATATTAGGTCATATACGGTTGAGACTTTGTTCATTAGCACGTTTAGAACGGATAATATTGGAATGTAAAGATGCCAGTCTTATTGTTGCTTTGCGTtccatagaaaaagatttaatatgtaaCAAAGGATGTCTTGTACCACTTCATGCGCAGCCTAGACTTTGcgctaaaaaaaatattttggtcATTGGTGGATCTAAAAGGGAACAAGCAGCAGATAGTTGGGGCAGAGCTGCTGAAAGCACTTATGAgagtattgaaaaatatgacaCTTTTACTGGCGAATGGAGCGAAGTAGCACCAATAAGCATAGGACGTATATTACCAGGTGTAGCACTTCTAGATGGTAAAGTATATGTAGTTGGAGGAGAACTGGAATCGTGTATCATTGCTAACTGTGAATGTTACGACCCCCGGGATAATGTATGGACATCGATTGCTTGCATGGAAGAACCCAGATGTGAATTCGGACTTTGTGCCTTGGATAATAGCTTATATGCATTTGGTGGTTGGGTAGGGGAAGATATTGGTGGTTCCATAGAAATTTATGATCCTATTACTAATACCTGGACGCTTGAAGGTGAACTTCCGGAACCACGTTTCAGTATGGGAGTTGTTGCGTTTGAaggATTAATCTATGTAGTAGGTGGTTGTACACACAACAGTAGGCATCGACAAGATGTGATGAGTTATAATCCAGTAACCAGAGAATGGAATAACTTAGCTCCTATGTTAACACCACGATCCCAAATGGGAATTACTGTTCTCGATGGTTATATTTATGTGGTTGGTGGTACCAATAAAAATCAAGAAGTTCTAAATTCCGTTGAACGGTATTCCTTTGAAAAGAATAAATGGAGCATGGTGGCATCAATGAACATTGGTCGTTCATATCCTGCAGTTGCTGCAGCTGATAGTAGATTATATGTTATTGGGGGGGATCAATCAcaagaaatcaatttttaccGTACACAGATAACTATTTCTACTGTAGAATGTTATGACCCACATTTAAATAAGTGGCATGAATGTGCTTCACTACCAACCAGCAGAGGTGAAGCAGCAGCTATTGTTGCTCCCTTTTGA
Protein Sequence
MSSSIRDKLISKIKIDDICKYMRVGVNKSFNWSENAAVVMRLKGKNNAKSFHSVYKVLSRICRKYIYGTVDKVQLDGFMADGAVPPLKNGHNSNNMGFATQPVSPTSDATSTVYAVGQYAPKVLRNLNGQRLKNQFTDVGLVADGSIIHAHRSVLAAGSAYFNAMFTGGLVEEQQELVEIHSISASILSLLIDFIYTGNVDITEDNVQELFAAADMLELDEVVSGCITYLEQQLHYSNALGIYRFAEAHNRLDLLETALRFIQVNFPQVSQEEEFLDLPKEHLVRFLSSDLIHIDTEFQVFQAAYNWIIHDIPARRCYVFEILGHIRLRLCSLARLERIILECKDASLIVALRSIEKDLICNKGCLVPLHAQPRLCAKKNILVIGGSKREQAADSWGRAAESTYESIEKYDTFTGEWSEVAPISIGRILPGVALLDGKVYVVGGELESCIIANCECYDPRDNVWTSIACMEEPRCEFGLCALDNSLYAFGGWVGEDIGGSIEIYDPITNTWTLEGELPEPRFSMGVVAFEGLIYVVGGCTHNSRHRQDVMSYNPVTREWNNLAPMLTPRSQMGITVLDGYIYVVGGTNKNQEVLNSVERYSFEKNKWSMVASMNIGRSYPAVAAADSRLYVIGGDQSQEINFYRTQITISTVECYDPHLNKWHECASLPTSRGEAAAIVAPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01508963; iTF_01512899; iTF_00047109; iTF_00262757; iTF_00051111; iTF_00351208; iTF_01233736; iTF_00828873; iTF_01120300; iTF_00773904; iTF_00829616; iTF_01514896; iTF_01299379; iTF_01513555; iTF_01090070; iTF_01234422; iTF_00048055; iTF_00263607; iTF_01233079; iTF_01129432; iTF_01514233; iTF_00046267; iTF_00265819; iTF_00266555; iTF_01235101; iTF_01454272; iTF_01489509; iTF_01488802; iTF_01266956; iTF_00265107; iTF_01245313; iTF_01407489; iTF_00015458; iTF_00129858; iTF_00868962; iTF_01355523; iTF_00182052; iTF_00885253; iTF_00264390; iTF_01228454; iTF_01423014; iTF_01015943; iTF_00730152; iTF_00129097; iTF_00182697; iTF_01477705; iTF_00126827; iTF_00868203; iTF_00128332; iTF_01087308; iTF_01422317; iTF_01423757; iTF_01477005; iTF_00181390; iTF_01421646; iTF_00729423; iTF_00730863; iTF_01523471; iTF_00016112; iTF_00867537; iTF_01261905; iTF_01409297; iTF_00452658; iTF_00280051; iTF_00765779; iTF_01254899; iTF_01476339; iTF_01354708; iTF_01406644; iTF_01520372; iTF_00280661; iTF_00417685; iTF_01405878; iTF_00385655; iTF_00016760; iTF_00898872; iTF_01229112; iTF_01408378; iTF_00769787; iTF_01099323; iTF_00014812; iTF_00109917; iTF_00127581; iTF_00126079; iTF_01077567; iTF_01512257; iTF_00798692; iTF_00439585; iTF_01102916; iTF_01306599; iTF_01100718; iTF_01103666; iTF_00728733; iTF_01102174; iTF_01049031; iTF_00718724; iTF_00939717; iTF_01303561; iTF_00174410; iTF_00938858; iTF_01414317; iTF_01200303; iTF_00159216; iTF_00719539; iTF_01411638; iTF_00175160; iTF_01413465; iTF_00175834; iTF_01048314; iTF_01412447; iTF_00060448; iTF_00232682; iTF_00216481; iTF_01419073; iTF_00219202; iTF_00230114; iTF_00233314; iTF_00397410; iTF_00982370; iTF_01056162; iTF_01123138; iTF_00215107; iTF_00221347; iTF_00221987; iTF_00232067; iTF_00734020; iTF_00841188; iTF_00983044; iTF_01419716; iTF_01069061; iTF_00217158; iTF_00217831; iTF_00142536; iTF_00343272; iTF_01207464; iTF_00231401; iTF_00214474; iTF_00963274; iTF_00964554; iTF_01066346; iTF_00141291; iTF_00219883; iTF_00225323; iTF_01539691; iTF_00303180; iTF_00676108; iTF_01057004; iTF_00230765; iTF_01071085; iTF_00118094; iTF_00754862; iTF_01273870; iTF_01421006; iTF_01424462; iTF_00215791; iTF_00684239; iTF_01067695; iTF_00141904; iTF_00398192; iTF_00625584; iTF_00218513; iTF_00223281; iTF_00226001; iTF_00414417; iTF_00873873; iTF_00963921; iTF_01070449; iTF_00222610; iTF_00756754; iTF_01067026; iTF_01498291; iTF_00391412; iTF_00961908; iTF_00633717; iTF_00228054; iTF_01497558; iTF_01538070; iTF_00652919; iTF_00228760; iTF_00229432; iTF_01417784; iTF_00226681; iTF_00983674; iTF_00438171; iTF_01069755; iTF_00220668; iTF_00306364; iTF_00438844; iTF_00761052; iTF_01065660; iTF_01418428; iTF_01420348; iTF_00223965; iTF_00224638; iTF_00227358; iTF_00962590; iTF_01068382; iTF_00140671; iTF_01122527; iTF_00629216; iTF_01057760; iTF_00865409; iTF_00861252; iTF_00762631; iTF_00763308; iTF_00866094; iTF_00184015; iTF_00966095; iTF_00864722; iTF_00863349; iTF_00861974; iTF_00864054; iTF_00024697; iTF_00860477; iTF_00866781; iTF_00183359; iTF_00862656; iTF_00084648; iTF_00088131; iTF_01169262; iTF_00087283; iTF_00085495; iTF_00088922; iTF_00086400; iTF_00393682; iTF_01255778; iTF_00360981; iTF_00360290; iTF_00011251; iTF_01390434; iTF_01392130; iTF_00881380; iTF_00980263; iTF_00882258; iTF_01392884; iTF_00460917; iTF_00200886; iTF_00064570; iTF_01394459; iTF_01389565; iTF_00676862; iTF_00883134; iTF_01391294; iTF_01393649; iTF_00089683; iTF_01271321; iTF_01269892; iTF_01267662; iTF_01270610; iTF_01268375; iTF_01269150; iTF_01379390; iTF_00459877;
90% Identity
iTF_01512899; iTF_01233736; iTF_01514896; iTF_01513555; iTF_01090070; iTF_01234422; iTF_01233079; iTF_01514233; iTF_01235101; iTF_01512257; iTF_00754862; iTF_00306364; iTF_01454272;
80% Identity
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