Pcan007946.1
Basic Information
- Insect
- Polistes canadensis
- Gene Symbol
- TFIP11
- Assembly
- GCA_001313835.1
- Location
- NW:986307-990865[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.9e-98 2.2e-94 315.1 18.5 1 275 395 662 395 662 0.98 2 3 0.00034 1.6 7.3 0.1 242 274 674 706 666 707 0.89 3 3 0.37 1.7e+03 -2.6 0.0 141 190 725 774 723 784 0.77
Sequence Information
- Coding Sequence
- atgtCGGAAGACGAAGTGGAAAGTTTCGAGATAACCGATTACGATttggaaaatgaatttaatattaatcgtcCTAGACGAAAACTTACGAAAAAACAACAGATGCTTGgcATCTGGGCAGATGACAGCGATGAAGATGAACTTTCTGCAAGACCATCTTTCAAAACATATAATAAAGGGCCAAAGAATTATACCGTTCCAGTTCATTTTGTTGCCGGAGGGATTCAACAAGCTGGTAAAACaccagaagaaaaagaagacaaagacAAAGATGAAGACGATGAGGATGATACAAATATGTCTCAAAGAGACGAGGGATATTTTCATAGTTCaagCTCGGAGGATGAGAAACCGAGTAATTCCAAACAACGTGCATCATTTTCATTGAACGTAGATGGTGATATAGCTGGATTACGTAAAAAGAGATATCAAGTGAATCCTTCGTTTATGAAAAGCGGTGTTGGTAGTTGGGAAGTTCACACTAAAGGAATTGGAGCAAAACTTTTACTACagatGGGTTTTGAACCTGGCAAAGGATTAGGAAAACAATTGCAAGGAATAAGTGCACCAGTAGAAGCTCACTTTAGGAAAGGTAGAGGTGCTATTGGTGCGTACGGTCCAGAAAAAGGACCAAAAGTTAttgaaaagaggaaagaagaagcagaGGAAACAAAAGATTCCAAACCGAAAGTATCTCAATGGCGTAAAGGAGATACGAttagtaataagaaaaaagtaaaatactcATATCGCAGTGTCGATCAAGTTCTAGAAGATGGTAAATTGAAACCAAATAGAAAACTTCCGCTTTCTAGTGAAATGAGTAGGGTCAAAGTTATAGATATGACTGGACCTGAGCAAAGAATTTTAAGTGGTTATCATGCGATAGCTAGTGGTCAGCAATATCCTGATGAAAGTATTCCAAGCgttaataaaaaggataaaatcaattttgctTTACCGGAATTGCaacataatttaaatcttttgGTGGATATGTGCGAACAAGATATCATACAAAATGATAGAAGAGCGAGACACCTTAACGATAGAGTGATAGCGTTAGAagcggagaaaaaaaatttatccaAAGTTGTAGATCAGCATGGACAACTCATTGATACTTTGGAAAATGTTCTAGCCGTTGTCGATAGATTAATGGATGAAACAAGTGATATAACGTTGCAAGATATCGCGgatgtatttaaaaacttaCAAAACAGATATTACGAGGAATACAAGATGTACGAATTGGGTGATTTGGCAACCAGTTTTGTGGGCCCGAAAATAAAGGATTATTTACTTTCTTGGAATCCATTAATACAACCGAAACAACCAATTAAATTGTTTGAAcaatggaaagaaatattagaaactGGTATGAGTCCACTTCAAACAAGAACAATTCATCCCTACGACCAACTTGTTTGGAATGCTTGGATGCCTTCTATCAGAGGAGCTGTACAtcAATGGGCATGCAGGCAGCCAGATCcgttaatagaattattagaaCATTGGATACCATTGTTACCTGGATggatttttgaaaatattttagatcTTTTAATACTTCCTAAGCTTACTTTAGAAGTAGAAGAATGGAACCCCCTCACAGATACTGTTCCAATACACACATGGATCCATCCATGGTTACCGTTAATGcgTAATTGGTTGGATACGTTAATATATCCAATCATAAGACGCAAATTGGGTTCTGCTTTAGGAGGCTGGCATCCGTCAGATAGATCGGCAAGATTAATGTTACAACCTTGGTCGGAAGTATTCGCTAAAGCCGACATGGAAGCTTTcttagttaaaaatattataccaaAACTTCAAATAGCTTTATCCGAATTTGTCATAAATCCGCATCAGCAGCATTTGGATCAATGGAATTGGGTGATAGAATGGAAAGAATTAATACCTTCACACATAATGGCCAATTTActcgacaaatttttcttccccAAATGGGAACAAGTATTATCTTTTTGGTTAAATCATTCTCCGGATTATGATCAAGTTATGAATTGGTATATGGGATGGAAGGGTATGCTGAGTGATAAATTATTGGCTGAACCATTAGTAAAAGAACATTTCAAGAAGACTATAGATATACTAAACAGAGCATTAACAACACCTCCAAGTCATCAACCGGGAACTATGGATCAAGTTTCGTATTTGAACAATTTGGAGAGGACTCAATCGACGATGATGTCGCAGATGCCATCCGTGGTACAACCAAGGATAGAaAGATTGGCAGAAGCAGTTAGAATAGCAGCACCACAAATTCATTTAGGTTTTAAAGACCTCATTCAGAGGAAGTGCGAAGAACGTGGAATACTTTTCATGCCTATTCCAAATAAATACAGAGAAGCGAAGCAAGTTTACAAAGTGGGAAATGTTCAAGCATATATAGACGGTAAAATGATCTTCGTTTATCACAACGGAGCCAATTGGACGCCAACGAATGTGAACGCCTTGCTCGATATGGCAGAACTTTAG
- Protein Sequence
- MSEDEVESFEITDYDLENEFNINRPRRKLTKKQQMLGIWADDSDEDELSARPSFKTYNKGPKNYTVPVHFVAGGIQQAGKTPEEKEDKDKDEDDEDDTNMSQRDEGYFHSSSSEDEKPSNSKQRASFSLNVDGDIAGLRKKRYQVNPSFMKSGVGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHFRKGRGAIGAYGPEKGPKVIEKRKEEAEETKDSKPKVSQWRKGDTISNKKKVKYSYRSVDQVLEDGKLKPNRKLPLSSEMSRVKVIDMTGPEQRILSGYHAIASGQQYPDESIPSVNKKDKINFALPELQHNLNLLVDMCEQDIIQNDRRARHLNDRVIALEAEKKNLSKVVDQHGQLIDTLENVLAVVDRLMDETSDITLQDIADVFKNLQNRYYEEYKMYELGDLATSFVGPKIKDYLLSWNPLIQPKQPIKLFEQWKEILETGMSPLQTRTIHPYDQLVWNAWMPSIRGAVHQWACRQPDPLIELLEHWIPLLPGWIFENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLMRNWLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSEVFAKADMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVIEWKELIPSHIMANLLDKFFFPKWEQVLSFWLNHSPDYDQVMNWYMGWKGMLSDKLLAEPLVKEHFKKTIDILNRALTTPPSHQPGTMDQVSYLNNLERTQSTMMSQMPSVVQPRIERLAEAVRIAAPQIHLGFKDLIQRKCEERGILFMPIPNKYREAKQVYKVGNVQAYIDGKMIFVYHNGANWTPTNVNALLDMAEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01513470;
- 90% Identity
- iTF_01513470;
- 80% Identity
- -