Pper031269.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pocota personata
Gene Symbol
sip1
Assembly
GCA_963082735.1
Location
OY720430.1:161268191-161275767[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-94 9.3e-90 302.7 12.6 2 275 393 659 392 659 0.97
2 2 0.11 3.3e+03 -0.9 0.0 157 190 671 703 664 713 0.69

Sequence Information

Coding Sequence
ATGTCGGACAATGAATATGAGGCTTTTGAAATCAACGACTATGATTTGGCGAATGAATTCAATCCGAATCGACCACGGCGGAAGCTgacaaaaaatcaacaaatttatgGAATATGGGCTGACAGTGACAGTGATAATGACAGTGAAGTCGAGATGACCGGTCGGCGTGGCAAAGGCAGAAGTTCTGGTCCAGTAAACTTTGTTACCGGGGGAATACAGCAATCTGGCAGTTATAAGATCGATGAAAAAGACAAAGATGAGAATAATCAAATCACAGATGAAGAGGAAGACCGTCCAGCACAACGAGGCATGAAAGACGGCGATGGAAATACCTCCAGTAATACTTCATCTGATGAAGAGCATGCTAAACCAGCTCGTATGGGATCCGGTATGCAGCAGCAACAATCGGCTTCTAGCAGTAAGCCTGTGGGTGCATGGGAGCAGCACACAAAAGGAATCGGAGCCAAGTTGTTACTTCAAATGGGCTACAAGCCTGGCAAGGGTTTGGGTAAAGATTTACAAGGTATAGCACAACCGGTGCAAGCACATTTGCGAAAGGGACGTGGTGCTATTGGTGCATATGGCCCAGAAACACCTGCTACGATCGGAGATAAGGTGCACCACAATCAGAAAGAAGACAAAGACATTCGCGAAGCAAAGGAATTTAAAGACAAACTAAACAAATGGAAGCGAGACGACAATAAGAAGGAATCGAAGAAGAAACGTTACTACTACCGTAGTGTCGAGGAGGTGATCGAAAAGGGCAAGAAATACTCTAGTGGGATAATTCCAGACAAACTGAGTAAGAAACTCGGTAATGTCCCTGTGATTGATATGACTGGCCCTGAGAAACGTGTTCTGAGTGGGTACCATGCTCTGGGGCAGACAAAAATTATCGACGAAGATCTGTATGATTTGCAAGCATCTAAAAAGCCCACTGGTTTCGCCCTTCCGGAGTTAATGCACAATCTGAATCTAATTGTGAACCTCTGCGAACAGGATATCATTGCATTGGACAAGACAGAACGTGAGGCCGCAGACAGACAGGAGGCTCTTGAACATGAAAAAAGAAGTTTAGAGAAGATTGTAAGACTAGAAAAGGATCACATTGATACACTAGAGAAAGCTTTGTTATTGGTCGAAGAACTCACCACGAATCCCGAGAATTTGAGCCTTGCTCGTGCAGAAAACATATTTATCGAGTTGCAGAGGGATTTCGCCTCAGAGTACAAAGAGTTCGCTTTGGGTGATTTAGCGGCTGGAGTTATTGCACCTTTAGTCAATAATGAGCTAAAATTATGGAATCCACTTGAAGAACCGACAAGATTTATAGATTCCATAAAAAAATGGAGAACCATTCTGGACATGCATCAATCGGAGGAGCGAAACAATGTCTTTGATCCATATTCATCGCTGGTTTGGGCCGGTGTCATACCCAGCTTCAGAGCAACAGTAAGTGAATGGAATCCAAAGATGCATCAGAAGATGGCAGCACTTTTGGATTGTTGGGCTCCGCTATTTCCCACTTGGGTGTTGGATAATGTACTGGAACAACTGATTTTACCCCGACTCGTTGGTGGAGTGAAGGACTGGGATCCACTCACAGATACCGTCCCAATTCATAGTTGGATTCTGCCATGGTGTACAATTTTAAGACATAAGATGGAAGAGTATATATTCCCTACTATTCGAGAGAAATTGGGTAGCGCCCTACAAGCTTGGATACCGCAAGATCGTTCGGCAAGAGCAATGCTCACACCATGGAAGGGGGCGTTCGACGCTGGAGAAATGCAAGCCTTTCTGCTCAAACACATTATTCCGAAGTTGCAAATGGCACTCAATGAGATGGTCATCAATCCTTTGCAACAGGATTTGGAACTCTGGAATCAAGTCTGGGAGTGGAATGAACTAATACCCCCTCTGCTGATGGGTCAAATTCTCGATAAGTATTTCTTCCCCAAATGGATGCAAGTTCTTGTCCTGTGGCTAAATCAATCGCCAGACTTTGATCAAATCTCACGTTGGTACACCGGATGGAAGACAGTCCTCGGTGAGGAATTGTTAAAGCAGCCAATGATCAAAGAGCACCTACGACGAGCACTTGAAATGATGCATCGGGCAACTGAAACAGTATCTTCACCTCAGTCTACACCCGCACCAGTTGCACCTCCACAGCCTACCGCACCAAGTACTTCCTCAGTAGGACCTCCAGCGTTGATGGATCTACAAATCACACCACCTACTCAGTTGGAGTTCAAGGAACTCGTTTCGCAGAAGTGTGCGGAGCGTGGTATTATATTTGCACCAATGCCTGGACGCAGAGAATTTGGCAAACAGGTCTATCgagttggaaaattattttgctaTATCGATCGTAATGTTGTTATGCTGAGCGACGGAAGTTTGAAAAACTGGACACCAACCTCATTGGGGTTGACTATAGAAAGGGCTTTGTCTGGATAG
Protein Sequence
MSDNEYEAFEINDYDLANEFNPNRPRRKLTKNQQIYGIWADSDSDNDSEVEMTGRRGKGRSSGPVNFVTGGIQQSGSYKIDEKDKDENNQITDEEEDRPAQRGMKDGDGNTSSNTSSDEEHAKPARMGSGMQQQQSASSSKPVGAWEQHTKGIGAKLLLQMGYKPGKGLGKDLQGIAQPVQAHLRKGRGAIGAYGPETPATIGDKVHHNQKEDKDIREAKEFKDKLNKWKRDDNKKESKKKRYYYRSVEEVIEKGKKYSSGIIPDKLSKKLGNVPVIDMTGPEKRVLSGYHALGQTKIIDEDLYDLQASKKPTGFALPELMHNLNLIVNLCEQDIIALDKTEREAADRQEALEHEKRSLEKIVRLEKDHIDTLEKALLLVEELTTNPENLSLARAENIFIELQRDFASEYKEFALGDLAAGVIAPLVNNELKLWNPLEEPTRFIDSIKKWRTILDMHQSEERNNVFDPYSSLVWAGVIPSFRATVSEWNPKMHQKMAALLDCWAPLFPTWVLDNVLEQLILPRLVGGVKDWDPLTDTVPIHSWILPWCTILRHKMEEYIFPTIREKLGSALQAWIPQDRSARAMLTPWKGAFDAGEMQAFLLKHIIPKLQMALNEMVINPLQQDLELWNQVWEWNELIPPLLMGQILDKYFFPKWMQVLVLWLNQSPDFDQISRWYTGWKTVLGEELLKQPMIKEHLRRALEMMHRATETVSSPQSTPAPVAPPQPTAPSTSSVGPPALMDLQITPPTQLEFKELVSQKCAERGIIFAPMPGRREFGKQVYRVGKLFCYIDRNVVMLSDGSLKNWTPTSLGLTIERALSG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01542208;
90% Identity
iTF_01541437; iTF_01542208;
80% Identity
-