Pxyl010635.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Plutella xylostella
Gene Symbol
sip1
Assembly
GCA_905116875.1
Location
CAJHNJ020000120.1:6320099-6331024[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-58 5.5e-54 184.3 9.4 2 275 375 630 374 630 0.97

Sequence Information

Coding Sequence
ATGTCTGATGATGAAGTACTGAAGTTTGAGATCACTGATTATGACCTGGATAATGAATTCTTCACTCATAGAGGGGGAAGAAAAAACAAAAAAGAACATCAAATTTATGGTGTGTGGGCTAAAGACAGTGATGAGGAAGACAATGAAGACAACATCAGACAGAGAACTCGTAAACCCAAAGACTTCTCAGCCCCTATTGGCTTTGTGGCCGGTGGGGTACAACAAGCAGGGAAAAAGAAGGCTGAAAATAAAGAGTCAAAGGCCGTTGAGTCATCAGAAGCCACAACCTCGAGGCCAGCGTATGCGGACAGTTCAGATGAGGATGAGCAACCGTCTGTTCCTGAGGAGAGGGAGACGGCAGGCATCAGGAGAGCGGGACAGGGCATGCGGCAAGTCAACCTCGGCGGCAATGTGGGCCACTGGGAGAAACATACCAAGGGTATCGGGGCTAAGTTGCTGTTGCAGATGGGATACCAACCAGGCAAAGGTCTTGGCAAAGACCTGCAAGGTATCTCGGCTCCGGTTGAGGCTACATTGAGGAAAGGAAGAGGAGCCATTGGAGCGTATGGGCCTGAAAAAGCAGCTCTAAAAGCGAAAAAGGAACAAGAGAAGAGACTGAAAGAGAAAGAAGATCAAGAAAAGGATGAGCAAGACAAGGATGCAAAAAAATCACACAACTGGAAGAAATCACATAAAGGAAGATACTTCTACAAGGATGCAGCTGACGTCATTCAAGAGGGTAAACCCACCATGCATTCTATCTCCAGTAACGAGTTAAGCCGCGTCCCAGTCATAGACATGACAGGGCGAGAACGTCGAGTGCTGAGCGGCTACCACGCGCTTCGGGCCAACGTGCCGCTGTACGAGCACGAGCCGAGGAAGGACTGTCGCCACTTCGCCGCGCCCGAGCTGACCCACAACCTGGAGCAGCAGCTGCAGTGCTGTGAGCAGGACATAATCCAAAACGCGCGCGAGTTGCACGCGGCAGAAGACGAGATAGTGGTCCTACAGCGAGACCTCGACGAGTGCGACAAGAAGATACGCGAACACGACCGCGTGGTCGACACCGTGCAGTCGATATTGGACCGAGCGGAGAGACTGAACAGGGATGATGTCAGCTTGGAGACCGCGCAGACTGTGTTGAAGGAGTTGAAGGAATCCTACCCTCTCGAATACGAAATGTTTGGCCTCGGAACTATAGCCGGGTCCATTGTATCGCCGCTACTCAGCGCCCTTTTGGCCAAATGGGACGCATTAGCGGATCCGGAAGAGCCCATAGAGACGTTTCTAAAATGGCGGTCGTTGCTGACAGTTGACGCGTATAATAGTCTGCTGTGGCAACACTTTGTGCCCAATGTGGAGAGGGCGGCTGAAATCTGGAACCCCCGCATCCCGCAGCCCATGCTGCGCCTCCTCGACGCCTGGTCAGCCGCCGCGCCGGCCTGGCTGCTCTGCATGACGGCGGCGCGCGCGGCCGTGCCCCGCGTGCTGTGCGCCGCGCAGGCGTGGGACCCCACGCGCGACACGCAGCCGCTGCACGCCTGGGTGCTGCCGTGGCACGACCTGGCCGGCGAAGCCCTATCAACAGCGGTCTACCCGCTGATCCGGTCCCGGCTAGCCACAGCCCTCAACGCGTGGCACCCTGCAGACTCCTCGGCCAAGCCGCTGCTAGCCGTGTGGAAGGACGCCTGGGGCCCCGCGCTGACGGCGCTGTTGCACCAGCATATTGTGCCGAAACTGGAGCATTGCCTGCAACATGCGCCGGTTGAGCTTGTTGGGAGGGAGAATACGGCCTGGCTCTGGTGCGTGGAATGGCTGAGCCTGCTCGGCGCGCCCACGCTGGCGGCGGTGGCGGCGCGCGCGCTGCTCCCGCGCTGGCTCGCAGCCCTCGCCGCCTGGCTCAACGCCAACCCGCCTCATGCGACCTTGCTGCAGAGCTACTCGGATTTTAAGAAAATGTTCCCGGAAGAGGTGCTAAAAGAGCCAGCAGTGCGGGACGCCTTCAGAAAAGCCCTGGACATGATGAACCGAAGCGCCGACATCGACTCTGTAGAAGCGCCGCCGCCGCCCCGCTTCACCATGCCAGAACCAAAAGAAGTTTCTAGAATCGCCGACGTTTTCGGCAGCACCAATCAAACGAAGAGCTTCTCCGAACTTCTGGAAACTCGATGCGTTGAAAATGGAATCACGTTCGTTCCGTTACCCGGGAAACTGAGGGAAGGGAGGCCGATCTATAGGATAGGAGCGTCGATGCAGTGCTACGTGATACGCAACGTGATCATGTATTCGAGTGATTCTGGGCGCGTTTTTGCGCCTATTTCTCTCGATAGGCTGTTGAAGTTGGCTGAGGATTGA
Protein Sequence
MSDDEVLKFEITDYDLDNEFFTHRGGRKNKKEHQIYGVWAKDSDEEDNEDNIRQRTRKPKDFSAPIGFVAGGVQQAGKKKAENKESKAVESSEATTSRPAYADSSDEDEQPSVPEERETAGIRRAGQGMRQVNLGGNVGHWEKHTKGIGAKLLLQMGYQPGKGLGKDLQGISAPVEATLRKGRGAIGAYGPEKAALKAKKEQEKRLKEKEDQEKDEQDKDAKKSHNWKKSHKGRYFYKDAADVIQEGKPTMHSISSNELSRVPVIDMTGRERRVLSGYHALRANVPLYEHEPRKDCRHFAAPELTHNLEQQLQCCEQDIIQNARELHAAEDEIVVLQRDLDECDKKIREHDRVVDTVQSILDRAERLNRDDVSLETAQTVLKELKESYPLEYEMFGLGTIAGSIVSPLLSALLAKWDALADPEEPIETFLKWRSLLTVDAYNSLLWQHFVPNVERAAEIWNPRIPQPMLRLLDAWSAAAPAWLLCMTAARAAVPRVLCAAQAWDPTRDTQPLHAWVLPWHDLAGEALSTAVYPLIRSRLATALNAWHPADSSAKPLLAVWKDAWGPALTALLHQHIVPKLEHCLQHAPVELVGRENTAWLWCVEWLSLLGAPTLAAVAARALLPRWLAALAAWLNANPPHATLLQSYSDFKKMFPEEVLKEPAVRDAFRKALDMMNRSADIDSVEAPPPPRFTMPEPKEVSRIADVFGSTNQTKSFSELLETRCVENGITFVPLPGKLREGRPIYRIGASMQCYVIRNVIMYSSDSGRVFAPISLDRLLKLAED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01544900; iTF_01542984; iTF_01546666; iTF_01561135;
90% Identity
-
80% Identity
-