Pfes012444.1
Basic Information
- Insect
- Plusia festucae
- Gene Symbol
- clz9
- Assembly
- GCA_950381575.1
- Location
- OX494442.1:2760282-2768477[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-08 4.7e-06 26.9 0.0 4 35 11 42 8 49 0.88
Sequence Information
- Coding Sequence
- ATGGCGCCGGTGAAAAATTATACACCACTTCAAATGCAACATGCTTTGGAAGCAGTAAACAAAGGAGAGAGCGTGTGCTCTGCAGCCAAAAAATATGGCGTACCACGAATAACCTTACACAATAAGTTCACTGGTAAGAGTCCGGCAGTATGTTCTATGGGCCCATCGTCAATATTGACGcaagaagaagaaaacattttgGTGAAATGGTTATTCGCTATGTCAGAAAGGCACTGTCCAGTGGCTAAAGAACAGCTACTGGACAGTGTCCAGGCGATTGTTAAATCAAGTAATAAACAGACGCCTTTTACCGATGGTAGACCAGGGCGCAAATGGTACCAAGCGTTTCTTAAACGTCACCCTGAAGTGTCTGAAAGGCTTTCTCAAAACTTGACAACATCTAGAGAAGCTGTAACCGAAAAACAAATAACTAGCTGGTTTGCTGAAGTTGGTGATTATTTACATAGCCAAGGTCTTAGCGACGCAATAAAGGATCCCACGAGAGTATTCAACACGGATGAAAGTGCCTTTTTTCTAAATCCAAACCCTGGCCACGTCTTGGTGAAAAAAGGCGACAAAAATGTATACAGCGTTTCAGGAAACGAAAAAGAAAATCTTACTGTGCTCATTACTGCAAATGCAGCAGGACAATTAGCACCGCCGATGATCGTTTTTGCATACGAACGAGTTCCAAAACATATTGCAGAAAGCGTTCCAAAGTCATGGGCTATAGGTAAATCCGAAAGCGGTTGGATGTGTAGCAGTACATTCTATGAATATATCACGAACATCTTTCACCCCTGGctaattgaatacaaaataaaactgccAGTGGTTTTCTTCCTAGATGGCCATGCCTCACACGTCACAAAACATCTATCAGACTTTTGTTCTCAGAGccaaattgaaattattacgCTGTACCCTAATAGCACACATTTGCTACAGCCAATGGATCTCGCAGTTTTCAGACCACTAAAAGCATTCTGGCGTAAACATGTTCGCATATGGAAAACCGAAAATTTGGGGCAGCAAGTCAAAAAAGACAAATTTGCTATTATACTAAAGAGTGCTCTAGAAGAACTCTCACAagaaagcattaaaaatggtttTCGGGCTGGAGGTTTGTTTCCATTTGGTCCGGAATATGTTGATTTTTCTAAAATGCACGCCCATAACAGAAGATCGACAAATGCTACTCAACATTTCTCACAGCACGACTTGGAGTTCATGACGAAACTGGAACAGGAAATAGTCAAAACGTTCACGCAGTCAAAACTGGACTTATATAAAAGATGTTTCTATATCCCGAGAACTGATTTGAATAACGTTTTGCCAAATGAAGATTTAACTCTATACACAATTTGGGCGAAGTATAAACAGTTATGTCACGCAAACAgagttgaaattgaaaatcaggaAGTGGCAACAGAGTTAGAGCAAATGGGAAAAGAATGCAACACTGGTCCAAAGCAGATTTCTGAGGACATCATTGCAAATCACCAAGAAGACGCTAACACTCTCTGTagctcttatttaaaaaatatgccaTCGATATCCTTTGCAGAAGTAAACGAAGATACAACTACGATAATGCAATACAACACATGTATCAGTACCGGGTCAAACATACTTCAAAACCAGGAATTATTCAATATGACACAAAATACTCCGATTAAAAATATGCCATCGACGAGTTTTGCAGAACACATGTTATGTGAACAAAACATCGTAGTACCATCACCATTTAAGAAAGCTCTTTTCTGGCCGGAACCCActataaaaaagaaaggaaGGATCTCAAAAGAAAAGCTACCATCAACAATTACGAGTCAAGCTTGGAGAGAATTTCATAAGAAGAAggaattggaaaaaaaaaataaagaagaagaaaaggaAAAACGAAAACAGGAAAGAATAGAAAACAAGACCAAACGTAACCAAACGAAAAGTGCAAGTCGCAATGGAAATAAAACCAAGAATAGAAAACGTAGAAAGGAATCCGTAACATCAAGTGATAATGAAGACAGTGATATAACATATGCAGAGTCAGGCGAAAGTGAAATTGAGTTTGAAACAGATTTGGAAAACAATCAGACAGAAAATAAACGGCCACTTGGAGAGAAAGAGGAGAACAATGACGAAGGAAAAGAATTCAAGAGGAGCGTAATCAAACCCATAAGTTATAATGGTGATGACGTGTCGGCGGACTCGGCGGGTGCTAATATTGTCCATGAAACTGATCATGATAATGGTAACGTAGCTGTGATTGATAATGCTGAGGATGAACTTTCCGATAGCGACACTAAATCTGTTAACAGCAGCACTGTCACGCGCTATTGGTGA
- Protein Sequence
- MAPVKNYTPLQMQHALEAVNKGESVCSAAKKYGVPRITLHNKFTGKSPAVCSMGPSSILTQEEENILVKWLFAMSERHCPVAKEQLLDSVQAIVKSSNKQTPFTDGRPGRKWYQAFLKRHPEVSERLSQNLTTSREAVTEKQITSWFAEVGDYLHSQGLSDAIKDPTRVFNTDESAFFLNPNPGHVLVKKGDKNVYSVSGNEKENLTVLITANAAGQLAPPMIVFAYERVPKHIAESVPKSWAIGKSESGWMCSSTFYEYITNIFHPWLIEYKIKLPVVFFLDGHASHVTKHLSDFCSQSQIEIITLYPNSTHLLQPMDLAVFRPLKAFWRKHVRIWKTENLGQQVKKDKFAIILKSALEELSQESIKNGFRAGGLFPFGPEYVDFSKMHAHNRRSTNATQHFSQHDLEFMTKLEQEIVKTFTQSKLDLYKRCFYIPRTDLNNVLPNEDLTLYTIWAKYKQLCHANRVEIENQEVATELEQMGKECNTGPKQISEDIIANHQEDANTLCSSYLKNMPSISFAEVNEDTTTIMQYNTCISTGSNILQNQELFNMTQNTPIKNMPSTSFAEHMLCEQNIVVPSPFKKALFWPEPTIKKKGRISKEKLPSTITSQAWREFHKKKELEKKNKEEEKEKRKQERIENKTKRNQTKSASRNGNKTKNRKRRKESVTSSDNEDSDITYAESGESEIEFETDLENNQTENKRPLGEKEENNDEGKEFKRSVIKPISYNGDDVSADSAGANIVHETDHDNGNVAVIDNAEDELSDSDTKSVNSSTVTRYW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00404787;
- 90% Identity
- iTF_00147344; iTF_00147343; iTF_00036600; iTF_00404787; iTF_01246810;
- 80% Identity
- -