Alit021061.1
Basic Information
- Insect
- Agrochola litura
- Gene Symbol
- clz9
- Assembly
- GCA_949152395.1
- Location
- OX424502.1:21058072-21064149[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-08 9.5e-06 26.7 0.0 4 36 11 43 8 49 0.91
Sequence Information
- Coding Sequence
- aTGGCGCCGGTGAAAAATTATACACCACTTCAAATGCAACATGCTTTGGAAGCAGTAAAAAAAGGAGAGAGCGTGTGCTCTGCAGCCAAAAAATATGGCGTACCACGAATAACCTTACACAATAAGTGCACTGGTAAGAGTCCGGCAGTATGTTCAATGGGCCCATCGTCAATATTgacgaaagaagaagaaaacatTTTGGTAAAATGGTTATTCGCTATGTCAGAAAGGCACTGTCCAGTGGCTAAAGAACAGCTACTGGACAGTGTCCAGGCGATtgttaaatcaaataataaacagaCGCCTTTTACCGATGGTAGACCAGGGCGCAAATGGTACCAAGCGTTTCTTAAACGTCACCCTGAAGTGTCTGAAAGGCTTTCTCAAAACTTGACAACATCTAGAGAAGCTGTAACTGAAAAACAAATAACTAGCTGGTTTTCTGAAGTTGGTGATTATTTACATAACCAAGGTCTTGGCGACGTAATGAAGGATCCCACGAGAGTATTCAACACTGACGAAAGTGCCTTCTTTCTAAATCCAAACCCTGGTCATGTCTTGGTGAAAAAAGGCGACAAAAATGTATACAGCGTTTCAGGGAACGAAAAAGAAAATCTTACTGTGCTCATTACTGCAAATGCAGCAGGACAATTAGCACCGCCGATGATCGTTTTTGCATACGAGCGTGTTCCAAAGCATATTGCAGAAAGCGTTCCAAACTCATGGGCTATAGGTAAATCCGAAAGTGGTTGGATGTGTAGCAGCACATTCTATGAGTATATCACGAACATATTTCACCCCTGGCTTAttgaatacaaaataaaactgcCAGTGGTTTTCTTCCTAGATGGCCATGCCTCACACGTCACAAAACATCTATCAGACTTTTGTTCTCAGAGTCAAATTGAAATTATTACGCTGTATCCTAACAGCACACATTTGCTACAGCCAATGGATCTCGCAGTTTTCAGACCACTTAAAGCATTCTGGCGTAAACATGTTCGCATATGGAAAACCGAAAACTTGGGGCAGCAAGTCAAAAAAGACAAATTTGCAATTATACTAAAGAGTGCTCTAGAAGAACTCTCAGAAGAAAGCATAAAAAATGGTTTTCGGGCTGGAGGTTTGTTTCCATTTGGTCCGGAATATGTCGATTTTTCTAAAATGCACGCCCATAACAGAAGATCGACAAATGCTACTCAACATTTCACACAGCATGACTCAGAGTTCATAACGAAACTGGAACAGGAAATAGTCAAAACGTTCACACAGTCAAAACTGGACTTATATAAAAGATGTTTCTATATCCCGAGAACTGATTTGAATAACGTTTTGCCAGATGAAGATTTAACTCTATACACAATTTGGGCGAAGTATAAACAGTTGTGTCATGCAAACAGAGTCGAATTTGAAAATCAGGAAGTGGCAACAGAGTTAGAACAAATGGGAAAAGAAAGCAACACTGGTCCAGAGCAGATTTCTGAGGACATCATTGCAACTCACCAAGAAGACGCCATAAATATGCCATCGACATACTTTGCAGAAGTAAACGAAGATACAACTACGATTATGCCATACAACACATGTATCAGTACCGGGCCAGACATACTTCAAAACCAGGAATTTTTCAATATGACACAAAAAACTCCGATTAAAAATATGCCATCGACATCCTTTGCAGAAGTAAACGAAGATACAACTACGATTATGCCATACAACACATGTATCAGTACCGGGCCAGACATACTTCAAAACCAGGAATTTGTCAATATGACACGAAAAACTCCGATTAAAAATATGCCATCGACGAGTTTTGCAGAACACATGTTACGTGAACAAAACATCATAGTACCATCACCATTTAAGAAAGCTCTTTTCTGGCCGGAACCCACTATAAAAAAGAAAGGAAGGATCTTAAAAGAAAAGCTACCATCAACAATTACGAGTGGAGCTTGGAGAGAATTTCATAGGAAGAaggaattggaaaaaaaaaataaagaagaagaaaaggaAAAACGAAAACAAGAAAGAATAGAAAACAAGACCAAACGTGACCAAACGAAAAGTGCAAGTCGCAACGGAAATAAAACCAAGAATAGAAAACGTAAAAGGCAATCCGTAACATCGAATGATACTGAAGACAGTGATATAACATATGCAGAGTCAGGAGAAAGTGAAATTGAGTTTGAAACAGATTTGGAAAACAACACTGAAAATGAACGGCCACATGTAGAGAACGAGGAGAACAATGACGAAGGAAAAGAATGCAAGGTGAAGAGAACAGTAGGAAGACAAAACGTTTTAACAGAAACTATTCATACGCCAAACCGTAGCTGTCCAATACAAATATTGAGCAGTGTTGACGTGCAAATGGTACTAGATGACAAAACTGGAAAATTCAAAGTATCCAAACAACGTAGATCATCTGATCCAAGTTGTTCAGATAATTTGAATGTTCCAAATGGACTGTCAGTCGGAAAATTTGTTCTTGTCAAATTCGATGGCAAAAGTACAACAAAGACTTACCGTTACGTGTGTATGATACAAGAAATTTATGAACAGGCAGATTCCCTACATTACTGCGGACTAAGATCTCGGATTGCGCAACAATTTAAGTTGGATTCCGCCCCCGCTGCCGAAGGCTCGGCCTTCACGGCTCGGCGAACATTCACTATTCGGATAAGACATGTATTCATAAAGGAACCTTACTCCATGTTGGTATTGAAGTTTAAGGGACACGCCATTATGCTACTTCGCAATTTCTAg
- Protein Sequence
- MAPVKNYTPLQMQHALEAVKKGESVCSAAKKYGVPRITLHNKCTGKSPAVCSMGPSSILTKEEENILVKWLFAMSERHCPVAKEQLLDSVQAIVKSNNKQTPFTDGRPGRKWYQAFLKRHPEVSERLSQNLTTSREAVTEKQITSWFSEVGDYLHNQGLGDVMKDPTRVFNTDESAFFLNPNPGHVLVKKGDKNVYSVSGNEKENLTVLITANAAGQLAPPMIVFAYERVPKHIAESVPNSWAIGKSESGWMCSSTFYEYITNIFHPWLIEYKIKLPVVFFLDGHASHVTKHLSDFCSQSQIEIITLYPNSTHLLQPMDLAVFRPLKAFWRKHVRIWKTENLGQQVKKDKFAIILKSALEELSEESIKNGFRAGGLFPFGPEYVDFSKMHAHNRRSTNATQHFTQHDSEFITKLEQEIVKTFTQSKLDLYKRCFYIPRTDLNNVLPDEDLTLYTIWAKYKQLCHANRVEFENQEVATELEQMGKESNTGPEQISEDIIATHQEDAINMPSTYFAEVNEDTTTIMPYNTCISTGPDILQNQEFFNMTQKTPIKNMPSTSFAEVNEDTTTIMPYNTCISTGPDILQNQEFVNMTRKTPIKNMPSTSFAEHMLREQNIIVPSPFKKALFWPEPTIKKKGRILKEKLPSTITSGAWREFHRKKELEKKNKEEEKEKRKQERIENKTKRDQTKSASRNGNKTKNRKRKRQSVTSNDTEDSDITYAESGESEIEFETDLENNTENERPHVENEENNDEGKECKVKRTVGRQNVLTETIHTPNRSCPIQILSSVDVQMVLDDKTGKFKVSKQRRSSDPSCSDNLNVPNGLSVGKFVLVKFDGKSTTKTYRYVCMIQEIYEQADSLHYCGLRSRIAQQFKLDSAPAAEGSAFTARRTFTIRIRHVFIKEPYSMLVLKFKGHAIMLLRNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147343; iTF_00147344; iTF_01246810; iTF_01527110; iTF_01527109;
- 90% Identity
- iTF_01221471;
- 80% Identity
- -