Basic Information

Insect: Plebejus argus
Gene Symbol: ush
Assembly: GCA_905404155.1
Location: FR989927.1:23478636-23482539[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.003 0.23 12.4 0.3 1 20 113 132 113 134 0.95

2 9 2.9e-05 0.0022 18.8 0.5 1 23 171 193 171 193 0.98

3 9 0.011 0.85 10.6 0.9 2 20 223 241 223 243 0.93

4 9 0.25 19 6.4 1.3 2 21 480 499 479 500 0.90

5 9 0.011 0.82 10.7 0.3 3 20 529 546 527 548 0.90

6 9 4 3e+02 2.6 0.0 2 23 575 596 574 596 0.93

7 9 0.0037 0.28 12.2 1.2 1 23 602 624 602 624 0.99

8 9 0.14 11 7.2 0.7 1 23 663 686 663 686 0.96

9 9 0.2 15 6.7 0.8 2 19 729 746 729 748 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.003	0.23	12.4	0.3	1	20	113	132	113	134	0.95
2	9	2.9e-05	0.0022	18.8	0.5	1	23	171	193	171	193	0.98
3	9	0.011	0.85	10.6	0.9	2	20	223	241	223	243	0.93
4	9	0.25	19	6.4	1.3	2	21	480	499	479	500	0.90
5	9	0.011	0.82	10.7	0.3	3	20	529	546	527	548	0.90
6	9	4	3e+02	2.6	0.0	2	23	575	596	574	596	0.93
7	9	0.0037	0.28	12.2	1.2	1	23	602	624	602	624	0.99
8	9	0.14	11	7.2	0.7	1	23	663	686	663	686	0.96
9	9	0.2	15	6.7	0.8	2	19	729	746	729	748	0.93

Sequence Information

Coding Sequence: ATGGGAGTAGGTGAAGACGAGGAATGGGGAAACGAGAGCGAGGCGATGCCGGTAGAACCTCGCACGCCGAGCTCGGGCGGAGAGCGCGCGGCGTCCAGTGGGGACGCGTCACCGACCTCGGAGGGCTCGGCGACCAACTCGCCCCCGCGGCTGCGGCTCAACGCGAGCCTGGCGACCGACCCGGCCCTCGCGCCGCGCGCCACGTCGCTATCGTCGCTGAAGCACGAGCCCCCCTCGCCGTCGCCGCCGCCCCCGCCGGCGCAGCCGATCAACTACATGCCTCTGACGGCGGCCAATTTCCCGTCGCTATTTCCGGCGGCGACGGCACCCACCGGATACACGTGTAAGCCGTGCGGAATCCGATACTCGTCGCTGAGTACCCTTCAAGCTCACCAGGAGCACTACTGCTCCAAAAGAAGAACGAAGCCGGACGGCACGGAGGCCCCGGTCGACGCCGCCGCCGACGAGTCGAGCGGAGACTCGAAGACGCCCAAGCCGCTCGGAAAACAATACGCTTGTCCCTACTGCTCCTATAGCGCCGACAAGAAGGTCAGCCTCAACAGGCACATGCGCATGCACTCCTCGTCCCCCGTGAGCACCGGCACGCCGGGGCCGACCCCCACGTCCAACGGCGACTCCGCCGACGGTCCCCCGGCGCAGGACCGGTACTGCACAGATTGTGATATACACTTCAGCTCGCTGCGAACTTTTCGCGCCCACAAGGACTACTATTGCAACACGAGGCAGGTGGTGAAGCAGGCCCTGGCGGCGGCGCGCGCGAGCTCTGCGACGTCCGGCTCCGCGCCACCCTCCCCTGGGGCCACTCCTCCCGCTCAAAATCAGCTGGCCCTAGCTCTTCCCACTAATCCGATTTTAATAGTTCCGTACTCGATTCTCCGGAGCGCCAGCACGCTTCCCGGCACGACGCTTCCAGACCCGGAGACGCCCTGCTTCCTCCTCCCGAACGGGACGTTCCAACCCATAAGCAGGGCGCTACCCAACATCAACGCGGAGAACAAGGAGCCCGAGGTCCTGAAATCTGCGAATCGATGCAGGGAGCCCCCTCGCGACGGATCCACCCCGCTGGACTTGAGCGTTCGACGGACGCCCGAGTCGGGGACGCCGAACGACGAGCACGAGAAAGAAAACAGGCTCCGGTCCGCCACGCCCGAGCAGATCGTGTGCGCGCCATCGCTGCCCGGCTCCCCGGGCACCCCTTCGCCGTCGCGGCGTTCTTCGTCACCCGGCGGGGAGTCGTCGCCGAAGAGACGCCGACGGAACTCGAGGGACCCCACGCCGAAACCCGCGAGCGTGTCCCCCCACGAGGAGAAGTACACCCCCTCGGTCACTCCGACCCTGCAGGGGGCGCTGGCGCTCCGGCTGGCCGCGGAGCTGCCGGCGGCGGCCCCACAGGTGCTGGTCAAGCAGGGCGTGTCCAAGTGCATAGAGTGCAACATAGTGTTCTGCAAATACGAGAACTACCGCGTCCACAAAAGAAACTACTGCTCGGCCGGGCGTGGCGAGGAGCGGGCGAGCCCCGCGCCGCCGGAGCCCGGGCCGCCGCCGCAGTACCGGCAGCTGATCTGCCTGGCGTGCGGCATCCACTTCAGCTCGTTCGACAACCTGACGACGCACCAGTCGTACTACTGCACGAAGAGGGAGACGCGGTCGCCGCGCGCAGCGGAGGCGGCGCGTCCGGCGGCGGCGGCGGAGGGCGGCTGGAAGTGCCCGTGCTGCGAGGTAGTGTCGCCCACGGCGGCGGCGGCGCAGCGCCACATGGAGGCGCACGCCGGCGTCAAGGCGTTCCGCTGCACCATCTGCCAATACCGCGGCAACACGCTGCGCGGCATGCGCACGCACATCCGCATGCACTTCCGCGAGAAGCCCGCCGACCTGCAGGAGGAGAGCTACATCTCGTGCGTGGTGGAGGAGTCCGGGGCGGAGGTCGACGCGGCGGGGGCGGGGGCGGCGGGGGGCGAGCGCGTGCACCGCTGCGGCACGTGCGCTTACACGTCCACGTACCGCGGCAACGTAGTGCGGCACGCGCGCCTCGTGCACGCCGCCGACGACGAAGACCGCGCCTCCCCCAGCCCTGCCCCCGCGTCTGCCCCGCCGCCCGCCCCCGCCCCCGCCCCGCCGCCCGACATCAAGCGGGAGCCGGACGCGGACGAGGACGCCCCTAACTACTGCAAGTCCTGCAACATCTCCTTCAAATACGTCAAGTCGTATAAAGCGCACAAGGACTTCTACTGCAACGCCGCACGGCAGGACGCCGCGGGGAACAACAACGTGGCGCCGCGCGACGCCGCGCCCGTCGTCTGA
Protein Sequence: MGVGEDEEWGNESEAMPVEPRTPSSGGERAASSGDASPTSEGSATNSPPRLRLNASLATDPALAPRATSLSSLKHEPPSPSPPPPPAQPINYMPLTAANFPSLFPAATAPTGYTCKPCGIRYSSLSTLQAHQEHYCSKRRTKPDGTEAPVDAAADESSGDSKTPKPLGKQYACPYCSYSADKKVSLNRHMRMHSSSPVSTGTPGPTPTSNGDSADGPPAQDRYCTDCDIHFSSLRTFRAHKDYYCNTRQVVKQALAAARASSATSGSAPPSPGATPPAQNQLALALPTNPILIVPYSILRSASTLPGTTLPDPETPCFLLPNGTFQPISRALPNINAENKEPEVLKSANRCREPPRDGSTPLDLSVRRTPESGTPNDEHEKENRLRSATPEQIVCAPSLPGSPGTPSPSRRSSSPGGESSPKRRRRNSRDPTPKPASVSPHEEKYTPSVTPTLQGALALRLAAELPAAAPQVLVKQGVSKCIECNIVFCKYENYRVHKRNYCSAGRGEERASPAPPEPGPPPQYRQLICLACGIHFSSFDNLTTHQSYYCTKRETRSPRAAEAARPAAAAEGGWKCPCCEVVSPTAAAAQRHMEAHAGVKAFRCTICQYRGNTLRGMRTHIRMHFREKPADLQEESYISCVVEESGAEVDAAGAGAAGGERVHRCGTCAYTSTYRGNVVRHARLVHAADDEDRASPSPAPASAPPPAPAPAPPPDIKREPDADEDAPNYCKSCNISFKYVKSYKAHKDFYCNAARQDAAGNNNVAPRDAAPVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00935260;
90% Identity: iTF_01248643; iTF_01179076; iTF_00745190; iTF_00404261; iTF_00406277; iTF_00289229; iTF_00164820; iTF_00934304; iTF_00935260;
80% Identity: -