Pros049348.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Platycheirus rosarum
Gene Symbol
Hr39
Assembly
GCA_963971375.1
Location
OZ020510.1:95952708-95957722[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.51 1.4e+04 -3.4 0.2 78 78 66 66 11 167 0.53
2 4 1.2 3.5e+04 -4.6 9.8 56 165 213 322 194 350 0.44
3 4 4.5e-14 1.3e-09 39.6 1.3 1 151 447 582 447 594 0.67
4 4 2.3e-77 6.4e-73 248.1 0.2 200 408 589 790 575 790 0.95

Sequence Information

Coding Sequence
atGTCATCAACAATTAAAAGCGATTCATCCACATACACTGCGCCTCATGGCAGCACCATCACTAACATAGTTGGTGTACAACAATCATCATTGACAACAACATCTATCACTCGTCACAACGTTTCGGTGACCAACATAAAATGTGAAGATCGTACTAACAGTTGTAGTCCACCACGGACAACAGTCAAGACTTCTATTGTAACACCAGCCTACTACAATCAAGGGAATGGAACTATTCGTATACCGGTTACAAAAAGAGATGATTCCGATTCGGAGAGTGAACTTTCTCATATTGAAAACCTGAAAGTCAATCGACGGTCTGCAAGTCACTCTGTCAAAAATGGTCCACGGCCAATGTCGTGGGAGGGAGGTCTTTCCGACAACGAGCCAGATCCGATGGACACCGAAAACTCGACAAGTTGCGATAAGACCTTCCCAAGTGCCCCAGTTACTGTAATTAATACCGATCCAGATCGTAAGCCGATAATCGATCACATTTGCCTCGAGATAAACTCATCACATTTCATCAGCAAGAAGCCACAGAGTGATCCTATTAACCTTAAATATGAGCCAGGACTTCTGGCTGATCCCACCGGTGCAAGAAACTCCCCATTGCTTGCCCGTTCCAAAACGACAACAAATGTGCTGCCTGCCAATCCTAGCCCCGATTCTGCCATTCATTCCGCTTACACGCACAGCTCACCAAGTGAATCACCTCTAACATCTCGACACGCCTCCTATACTCCCTCACTGAGCCGCAATAATAGCGATGCATCGCACAGCAGTTGTTACTCCTACAGCTCAGAATTCAGCCCAACACATTCACCCATCGCTGGCCGCCATAACATGTATGGCAACTATAGTGGCAGCTCGCTTCATCATTCCGTTTTGTATCGTCCGACTATTTCGGATAGCGGAAGTAGTGCTACTAGTTGCTCCTCTTCTGATCCACAAAATCTATCACAAGCCGCTGCTGTGGCAGCGGCGGCGTCTGCGCTGGCCGCAGCCTCCTCCACATCAATCTCGGTGAATGGTACCACTCCACCTGGCCTCAAGACAGAGGAGCTGCTCTTTGACAGTGAAGGAATTCCATCGGCAGGAATTTCTAGACAACAGCTGATTAACTCGCCGTGTCCAATATGTGGGGACAAGATCTCTGGCTtccactatggaattttctcaTGCGAGTCGTGTAAGGGATTCTTTAAAAGAACGGTACAAAATCGCAAAAACTATGTATGCGTTAGAGGCGGACCATGTCCCGTAACCATTTCCACACGCAAAAAGTGTCCTGCTTGTCGCTTTGATAAATGTCTGCAAAAAGGCATGAAACTTGAAGCAATTCGAGAAGATAGGACTCGTGGTGGGCGCTCTACATACCAGTGTTCGTACACGCTGCCCAATTCCATGTTAAGTCCGTTGCTAAATAGTGAACAGTCAAACCAGCAGCAAAATCATCAAACTGGCTCAACTCGCATGGGAATTAATGGTTTTGTTATCAAAACAGAGCAACCCGATAGCAGCACTGCTGGAACGTCTACCCCAACACCTGGCAGTAGTACCTATCAGCGTTCTACGAGTCAGGAAATCCCTACCCTGCTGCAGGATATAATGGACGTTGAGCATTTGTGGCAGTACAATGCAACAGAGTTGGCACGACTGAATCAACCTTTGTCGGCGTCGCACTCGTCTTTGACAGAATCGGCAACGGGTACATCTGGGAATATTGCTTCTAATCCGCTGCTGGCCAGCGCCGGTCTCTCATCGAATGGAGAGAATGCAAATCCAGACTTAATCGCCAACCTGTGTACAGTTGCTGACCATCGATTGTATAAGATTGTGAAATGGTGCAAAAGTTTGccactttttaaaaacatttctattgatGATCAAATATGCCTGCTTATCAATTCGTGGTGTGaacttttattgttttcatGTTGCTTCCGATCGATTGATTCACCAGGGGAAATTAAAATCTCACAAGGAAAGTCAATAAACTTGGTTCAAGCGAAGTCGAATGGTTTGCAGTCGTGCATTGAAAGGATGCTCAATCTGACAGATCATTTACGGCGACTTCGAGTCGATCAGTATGAATATGTTGCCATGAAAGTTATTATTCTACTTCAATCAGATACTTCTGAATTGACTGAACCCGTCAAAGTTCGTGAGTGTCAAGAAAAAGCCTTGCAATCTCTTCAATCATACACCTTAGCCTTCTACCCTGAAGCGCCATCGAAATTTGGCGAATTACTCCTAAGGATTCCAGAGCTACAAAGAACTTGTCAGCTTGGCAAAGAAATTCTGACTTTGAAATCTCGTGATGGAGGTGATTTCAATTTACTCATGGAACTGCTTCGCGGAGAACATTGA
Protein Sequence
MSSTIKSDSSTYTAPHGSTITNIVGVQQSSLTTTSITRHNVSVTNIKCEDRTNSCSPPRTTVKTSIVTPAYYNQGNGTIRIPVTKRDDSDSESELSHIENLKVNRRSASHSVKNGPRPMSWEGGLSDNEPDPMDTENSTSCDKTFPSAPVTVINTDPDRKPIIDHICLEINSSHFISKKPQSDPINLKYEPGLLADPTGARNSPLLARSKTTTNVLPANPSPDSAIHSAYTHSSPSESPLTSRHASYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIAGRHNMYGNYSGSSLHHSVLYRPTISDSGSSATSCSSSDPQNLSQAAAVAAAASALAAASSTSISVNGTTPPGLKTEELLFDSEGIPSAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVTISTRKKCPACRFDKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLNSEQSNQQQNHQTGSTRMGINGFVIKTEQPDSSTAGTSTPTPGSSTYQRSTSQEIPTLLQDIMDVEHLWQYNATELARLNQPLSASHSSLTESATGTSGNIASNPLLASAGLSSNGENANPDLIANLCTVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDSPGEIKISQGKSINLVQAKSNGLQSCIERMLNLTDHLRRLRVDQYEYVAMKVIILLQSDTSELTEPVKVRECQEKALQSLQSYTLAFYPEAPSKFGELLLRIPELQRTCQLGKEILTLKSRDGGDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00311850;
90% Identity
iTF_01212044;
80% Identity
iTF_01212044;