Pruf013105.1
Basic Information
- Insect
- Pimpla rufipes
- Gene Symbol
- Lztr1
- Assembly
- GCA_963932165.1
- Location
- OZ010637.1:15733969-15739029[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-13 4.5e-11 43.2 0.1 2 108 348 486 347 488 0.90 2 4 2.9 7.3e+02 0.7 0.0 76 107 486 517 483 519 0.85 3 4 9.8e-20 2.4e-17 63.4 0.0 9 96 580 667 572 682 0.84 4 4 1.2 3e+02 1.9 0.1 76 100 681 705 671 714 0.81
Sequence Information
- Coding Sequence
- ATGGCCACCGCCGAGTGCCTCACTCTGGATTTTGGTCCATTCGAGACGGTTCACCGATGGCAGCGGATGCCGGAGTGCGATGAATTTGTGGGCGCCAGACGCAGCAAGCACACCGTGGTGGCCTTCAAAGATGCCATTTACGTGTTTGGCGGCGACAATGGAATCAGGATGCTGAACGACCTGCTGCGCTTTGACGCCAAGGAAAAATCCTGGGGTCGAGCTATAGCCACCGGCGCGCCACCCGCTCCGCGCTATCATCATTCCGCGGTGGTGCACGACTCCTCGATGTTCGTCTTCGGCGGCTACACCGGCGACATCCATTCCAACTCCAATCTCACCAACAAGAACGATCTGTTTGAGTACAAGTTTCAGACTGGCCAGTGGACCGAGTGGAAGTTTATCGGAAAAACTCCCGTCGCAAGATCGGCCCACGGGGCGGCGATCTACGACAACAAATTGTGGATTTTCGCGGGATACGACGGAAACGTTCGGCTGAACGACATGTGGACGATCTCGCTGCTGCCCGGCGAGCCGAGGATCTGGGAGGAGGTCGTTCAGTCGGGCGACTGCCCGCCGACCTGCTGCAATTTTCCCGTTGCCGTTGCTCGGGAGTCCATGTTCGTTTTCAGCGGTCAAAGCGGTGCCAAGATCACCAACAGCCTCTTTCAATTCCACTTCAGAGACAAAcgttggACGCGCATTTCAACCGAGCACATCTTGCGCGGCGCGCCGCCCCCGCCGGCCCGTCGTTACGGCCACACGATGGTCAGCTTCGACCGTCACCTCTACGTCTTCGGCGGCACCGCCGACTCGACGTTACCAAACGATCTCCACTGCTACGACCTCGACACGCAGACGTGGAACGTCGTGCTGCCCTCGGCCACGAGTCAGATCCCGTCGGGCCGGCTCTTTCACGCTGCCGCCGTGATCGGCGAGGCGATGTTCATCTTCGGCGGCACCGTCGACAACAACGTTCGCTCGGGCGAGACTTACCGCTTCCAGTTCTCCTCCTACCCCAAATGCACGCTGCACGACGACTTCGGCAAGTTGCTCAACTCGCGGCTGTTCTGCGACGTCGAGTTCGTCGTCGGCGAGGCCGAGGCCGAGACGAAGATCCCCGCGCACATCGCGATGGTCGCCGCGCGATCGGAGTTTCTCAGCGCGCGGATAAAACaggcgcgcgagagacgcgagaagcATCTGGAGGAGGTTTTCGGCAACGCCGAAGTGCCGATCAAGGATCTGCCGTTGCTCGAGGTGCGACTCGACGACGCCGTTTCCGAGGCATTCGAGATGGTGCTCAATTACATTTACACGGATCGCATCGATCCGACCAAACGAATGGACGATCCCGAGCCGGGAAATCGCATCGTTCTGCTCATGATGGACGTTTACCGTCTCGCCGTGCAGTTCAACATGGAGCGGCTCGAGCAGCTGTGCGTTCATTACCTCGAGGCGACGATAACTCACGCCAACGTCCTGGAGGCTCTGCACAATGCGGCTCATCTAAATCTGCACTTCATCAAGGAAATTTGCCTGGGTTTCGTTGTTAAGGAGTGCAATTACAATCAGATCGTGATGAGCCAGGAATTTGAGACGCTCGATCAGCCGCTCATGGTCGAGATAATACGGCGACGGCAGATGCCGCAGACGCGGAACTTCTCGAAGCAATACGAGTCCGGCACGGGCACCACACTCGAGCAGGACATGGAGGCCTTTCTCAAGAGCGTCGGCCGCGAATTTTGTGACATTACACTGATGCTCGACGGCGTGCCGATTCCGGCTCACAAGGCGGTTCTCGCTGCCCGCTGCAGCTACTTTGAAGCGATGTTCCGGTCTTTCATGCCGGAGAATAATACTGTTAATATCCAAATCGGCGAGATGATCCCGTCGTCCGAGTCGTTCGCGTCCCTCCTGCGTTACATCTACTACGCGGACGTGGCGATGCCGCCCGAGGACTCGCTGTACCTCTTCACCGCCCCGGTTTTCTACGGTTTCACGAACAACCGGCTGCAGGCGTTTTGCAAGCAGAATCTCGAGATGAACGTGACGTTCGAGAACGTGATACAGATATTGGAGGCGGCGGACAGGATGCAGGCGGCCGATATGAAGAAATACGCGTTGAATCTCATAGTTCATCATTTTAGCAAGGTCGCTCGGCTACCGAGGCTCAAGCAGCTGAGCAGAGACCTCCTGCTGGACATACTGGACGCCCTGGCCGACGAGAGGAGTGAGGCGCGAACCTGTCAGGACATGACGAGCGATTGCTGA
- Protein Sequence
- MATAECLTLDFGPFETVHRWQRMPECDEFVGARRSKHTVVAFKDAIYVFGGDNGIRMLNDLLRFDAKEKSWGRAIATGAPPAPRYHHSAVVHDSSMFVFGGYTGDIHSNSNLTNKNDLFEYKFQTGQWTEWKFIGKTPVARSAHGAAIYDNKLWIFAGYDGNVRLNDMWTISLLPGEPRIWEEVVQSGDCPPTCCNFPVAVARESMFVFSGQSGAKITNSLFQFHFRDKRWTRISTEHILRGAPPPPARRYGHTMVSFDRHLYVFGGTADSTLPNDLHCYDLDTQTWNVVLPSATSQIPSGRLFHAAAVIGEAMFIFGGTVDNNVRSGETYRFQFSSYPKCTLHDDFGKLLNSRLFCDVEFVVGEAEAETKIPAHIAMVAARSEFLSARIKQARERREKHLEEVFGNAEVPIKDLPLLEVRLDDAVSEAFEMVLNYIYTDRIDPTKRMDDPEPGNRIVLLMMDVYRLAVQFNMERLEQLCVHYLEATITHANVLEALHNAAHLNLHFIKEICLGFVVKECNYNQIVMSQEFETLDQPLMVEIIRRRQMPQTRNFSKQYESGTGTTLEQDMEAFLKSVGREFCDITLMLDGVPIPAHKAVLAARCSYFEAMFRSFMPENNTVNIQIGEMIPSSESFASLLRYIYYADVAMPPEDSLYLFTAPVFYGFTNNRLQAFCKQNLEMNVTFENVIQILEAADRMQAADMKKYALNLIVHHFSKVARLPRLKQLSRDLLLDILDALADERSEARTCQDMTSDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00087267;
- 90% Identity
- iTF_01056144;
- 80% Identity
- -