Prap003546.1
Basic Information
- Insect
- Pieris rapae
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905147795.1
- Location
- LR990584.1:7900187-8045813[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-14 2e-11 43.6 0.0 1 40 343 382 343 385 0.93 2 2 1.3e-18 1.1e-15 57.2 0.0 1 43 548 591 548 593 0.95
Sequence Information
- Coding Sequence
- ATGGACTACGGCTGCATTGCCTCTATAAGGGTTGCCGGTCTGTCATGGCGGAGTGCTCATTCGCGCGCTGTCAGCAGGAACGACGAGCGATCCGCAAGGAACTGCAACGTTGGACCAAAAACATGGTTTATATACTCGTATGTATGGATAACCAGACCTAACTTTATCAGAACGCTGAATTTGGATATCGGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGAAGAAAATGGAAACTGTATCAAGACGCATTGATTCCAAAGCAGCTAGAGGGCGAGCAGTCAAGCGGAGACGAATCCATGCCTGCCACAGACCACCCGCCCGCTCTCAAGATAAAGACCATAGAGCAGATAAACGAGTCAGAGGAGGCCGACGAACCGGCCAGAAAGGACTCAATCCTCGAAAGTCTTATCAAACGTCCAGCGACGGCACCCAAGGTAGAGCCTCAGGAGCCAGCAGACTGGAAACCAGCAGACAAGTGCTACTTCTGCGTCGACGAGCGTGGAGAACGGACGGACAGGGCGGAAGGGGTGGACGCCAGGGCGGACGCTAGGGCGGACGTGAGGGCGGGCGGCGCAAACAGTCCCGAATCGGAATCGGATAGCAGTTCCTTGTCGGGAGCAAAAAGTCCCGCTGGCGGGCCACTACTGCTGCAGCAATTGCTGCAGTTGCAGCTGCAGGGGCAGAACCCGCAAGCGATAGCACAGGCTTACACGGAGATGTGTGTGCAGTTCCAACAGATGATTGCTGCGTTGGCTGCCCTCGGCTCGGGGCTGGTTCCGCCGGCGCTGCCGCAGGCCTGGATGATGCAGAGGCTTCCGAGACCGCCGCTCGATAGGCTAGACGCAGAGAAGGTGGGTGCAGGAAGCGCCTCTCCCACCATAGCGGAGCAACCCCTGGACTTAAGCGCCAAGTCTACTTCCAGCACCAGCGGCACACCACCGCCGGAAAACAAAGGACAGGATAATGCGAGATTAAAACGAGCTGTTCTTGAGGGCAAAAGCAATAGCACTCGGCGGAACTACACCGAAGATGATCTTCAATCTGCATTGAGGGATATCCAATCTGGATTGGGCACGCGCAGGGCCGCAGCACTTTACGGCATCCCACGGTCCACGCTACGAAACAAGGTCAACAAACATGGCCTTACTCCAGAAGCGCCTGAGTCCGAGGATAGTGACCCCGAGAAGCCAGACACGCCTTCATCTGTAATCCTCAAAATTCCCTCCTTTCCTCCTCCAGAGGATAAGAGCCCATCACCAGCCACATCCGTCACGACACCTGTGACGCCCATCACGCCGATATTACCTCCACAGTCGTCCCTAAATCACCCATCACCTTTGCTACTTCCGGCTTCCGTCTACGCCGACCCACCCGCGGCTTCACAACACTTATTCACGTCTATGAGCGACGTCATAGCTAAGAGCATATGCCAAAAGTTCCAACAGCCTCTGGATAGGCCGCTTCAGCCTGACATGTCTTACATGAGGGCGCCCGATCGACACGTCTCGGTCATAAAAACGCCACCGGATAATCAAAGAAATTATGCTGTACCCAGCAACTCCAAAGCGACAAATAACGGTCAGCCCGCCCAAGGTGGCAAAGGCACGAGACCAAAACGAGGTAAATACAGAAACTACGATCGTGACAGCCTCGTTGAGGCGGTAAAGGCGGTCCAGCGGGGCGAGATGTCCGTGCATCGGGCTGGCTCCTACTACGGTGTACCTCATTCCACTCTAGAATACAAAGTCAAAGAGCGGCATCTGATGCGGCCCCGCAAGAGGGAGCCTAAGCCGCCGCAGGAAACGAAGCCGCAGCCACCTAAACCGCCCCCTAAACCGACGAAGCCATTCACGAACGGACTGAACGGCCCTGAGGCGCCGGGCTATCCGGCCAACTACCCGTTCTGGGCGGGAGCACGGTTTGCGCCGCCCGCGTCCGACCTCTACACGTCGCATATGATGCGGCGACTACACGGCGAGGCCCCACCGGCCAACGGGTTCCTCGAGGGCATCATCCGGTCGAGCCTAGAGGCACGGCCGGGTGCAGCACTGCTGCAGCGGCTGACGGCGGAGCCGCGTGCGGAGGCACCGAGCCTCGCGCGGCGACTGGCTGGAGAGGTGGACGACGAGCCGGCGGCCCGGCGCCCTCGCCTGGACTCCGACCTGGCGTTGGCGGCTGAGATGCGCGAGGCGGTGCAGCGGCTACGCGCCGACAAGCTGCGACCGCGCAACGGCACGCCGACACCGCCGCGTGCGCCATCGCCCGCCGCTCCTCCCGCCGCGCCGCCACACTCCGCCTAG
- Protein Sequence
- MDYGCIASIRVAGLSWRSAHSRAVSRNDERSARNCNVGPKTWFIYSYVWITRPNFIRTLNLDIGLERVAEELMGRRKWKLYQDALIPKQLEGEQSSGDESMPATDHPPALKIKTIEQINESEEADEPARKDSILESLIKRPATAPKVEPQEPADWKPADKCYFCVDERGERTDRAEGVDARADARADVRAGGANSPESESDSSSLSGAKSPAGGPLLLQQLLQLQLQGQNPQAIAQAYTEMCVQFQQMIAALAALGSGLVPPALPQAWMMQRLPRPPLDRLDAEKVGAGSASPTIAEQPLDLSAKSTSSTSGTPPPENKGQDNARLKRAVLEGKSNSTRRNYTEDDLQSALRDIQSGLGTRRAAALYGIPRSTLRNKVNKHGLTPEAPESEDSDPEKPDTPSSVILKIPSFPPPEDKSPSPATSVTTPVTPITPILPPQSSLNHPSPLLLPASVYADPPAASQHLFTSMSDVIAKSICQKFQQPLDRPLQPDMSYMRAPDRHVSVIKTPPDNQRNYAVPSNSKATNNGQPAQGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQETKPQPPKPPPKPTKPFTNGLNGPEAPGYPANYPFWAGARFAPPASDLYTSHMMRRLHGEAPPANGFLEGIIRSSLEARPGAALLQRLTAEPRAEAPSLARRLAGEVDDEPAARRPRLDSDLALAAEMREAVQRLRADKLRPRNGTPTPPRAPSPAAPPAAPPHSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205624;
- 90% Identity
- iTF_01205624; iTF_01202395; iTF_01203965;
- 80% Identity
- -