Pbra012689.1
Basic Information
- Insect
- Pieris brassicae
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905147105.1
- Location
- LR989932.1:8600280-8631712[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-14 1.9e-11 43.7 0.0 1 40 282 321 282 324 0.93 2 2 1.1e-18 1.1e-15 57.3 0.0 1 43 487 530 487 532 0.95
Sequence Information
- Coding Sequence
- ATGTGTGGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGAAGAAAATGGAAACTGTATCAAGACGCATTGATTCCAAAGCGGCTAGAGGGCGAGCAGTCAAGCGGAGACGAATCCATGCCTGCCACAGACCACCCGCCCGCTCTCAAGATAAAGACCATAGAGCAGATCAACGAGTCAGAGGAGGCCGACGAACCGGCCAGAAAGGACTCAATCCTCGAAAGTCTTATCAAACGTCCAGCGACGGCACCCAAGGTAGAGCCTCAGGAGCCAGCAGACTGGAAACCAGCAGACAAGTGCTACTTCTGCGTCGACGATCGTGGAGAACGGACGGACAGGGCGGAAGGGGCGGACGCCAGGGCGGACGCTAGGGCGGACGTGAGGGCGGGCGGCGCAAACAGTCCCGCATCGGAATCGGATAGTAGTTCCTTGTCGGGAGCAAAAAGTCCCGCTGGCGGGCCACTACTGCTGCAGCAGTTGCTGCAGTTGCAGCTGCAGGGGCAGAACCCGCAAGCGATAGCACAGGCTTACACGGAGATGTGTGTGCAGTTCCAACAGATGATTGCTGCATTGGCTGCCCTCGGCTCGGGGCTGGTTCCGCCGGCGCTGCCGCAGGCCTGGATGATGCAGAGGCTTCCGAGACCGCCGCTCGATAGGCTAGACGCAGAGAAGGTGGGTGTAGGAAGTGCCTCTCCCACTATAGCGGAGCAACCCCTGGACTTAAGCGCCAAGTCTACTTCCAGCACCAGCGGCACACCGCCGCCGGAAAACAAAGGACAGGATAATGCGAGATTAAAGCGAGCTGTTCTTGAGGGCAAAAGCAATAGCACTCGGCGGAACTACACCGAGGATGATCTCCAATCTGCATTGAGGGATATTCAATCTGGGTTGGGCACGAGAAGGGCAGCAGCACTTTACGGCATCCCAAGGTCTACGCTACGAAACAAGGTCAACAAACATGGTCTTACTCCAGAAGCACCTGAGTCCGAAGACAGCGACCCCGAGAAGCCAGACACGCCTTCATCTGTTATCCTCAAAATTCCCTCCTTTCCTCCTCCAGAGGACAAGAGCCCGTCACCAGCCACGTCCGTCACGACCCCTGTGACGCCCATCACGCCGATATTACCTCCACAGTCGTCCCTAAATCACCCTTCACCTTTGCTACTTCCGGCTTCCGTGTACGCCGACCCACCCGCGGCTTCACAACACTTATTCACGTCTATGAGTGACGTCATAGCTAAGAGCATATGCCAAAAGTTCCAACAGCCCCTGGATAGGCCGCTTCAGCCTGACATGTCTTACATGAGGGCACCCGATCGACACGTCTCGGTCATAAAAACGCCACCGGATAATCAAAGAAATTATGCCGTACCCAGCAACTCCAAAGCGACAAATAACGGTCAGCCCGCCCAGGGTGGCAAAGGCACGCGACCAAAACGAGGTAAATACAGAAACTATGATCGAGATAGCCTCGTCGAGGCGGTAAAGGCGGTCCAGCGGGGCGAGATGTCCGTGCATCGGGCTGGCTCCTACTACGGTGTACCTCATTCCACTCTAGAATACAAAGTCAAAGAGCGGCATTTGATGCGACCCCGAAAGAGGGAGCCTAAGCCGCCGCAGGAAACGAAGCCGCAGCCACCTAAACCGCCCCCTAAGCCGACGAAGCCATTCACGAACGGACTGAACGGCCCCGAGGCGCCGGGATACCCGGCCAACTACCCGTTCTGGGCGGGAGCCCGGTTCGCGCCGTCCGCGTCTGACCTCTACACGTCGCATATGATGCGGCGACTACACGGCGAGGCCCCACCGGCCAACGGCTTCCTCGAGGGCATCATCCGGTCGAGCCTGGAGGCACGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGCGGAGCCGCGCGCGGAGGCACCGAGCCTCGCGCGGCGGCTAGCTGGAGAGGTGGACGATGAGCCGGCGGCGCGGCGCCCTCGCCTGGACTCCGACCTGGCGTTGGCAGCCGAGATGCGCGAGGCGGTGCAGCGGCTACGCGCTGACAAGCTGCGCCCGCGCAACGGTACGCCGACGCCGCCGCGTGCGCCATCGCCCGCCGCCCCTCCCGCCGCGCCGCCCCACTCCGCCTAG
- Protein Sequence
- MCGLERVAEELMGRRKWKLYQDALIPKRLEGEQSSGDESMPATDHPPALKIKTIEQINESEEADEPARKDSILESLIKRPATAPKVEPQEPADWKPADKCYFCVDDRGERTDRAEGADARADARADVRAGGANSPASESDSSSLSGAKSPAGGPLLLQQLLQLQLQGQNPQAIAQAYTEMCVQFQQMIAALAALGSGLVPPALPQAWMMQRLPRPPLDRLDAEKVGVGSASPTIAEQPLDLSAKSTSSTSGTPPPENKGQDNARLKRAVLEGKSNSTRRNYTEDDLQSALRDIQSGLGTRRAAALYGIPRSTLRNKVNKHGLTPEAPESEDSDPEKPDTPSSVILKIPSFPPPEDKSPSPATSVTTPVTPITPILPPQSSLNHPSPLLLPASVYADPPAASQHLFTSMSDVIAKSICQKFQQPLDRPLQPDMSYMRAPDRHVSVIKTPPDNQRNYAVPSNSKATNNGQPAQGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQETKPQPPKPPPKPTKPFTNGLNGPEAPGYPANYPFWAGARFAPSASDLYTSHMMRRLHGEAPPANGFLEGIIRSSLEARPGAALLQRLTAEPRAEAPSLARRLAGEVDDEPAARRPRLDSDLALAAEMREAVQRLRADKLRPRNGTPTPPRAPSPAAPPAAPPHSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205624;
- 90% Identity
- iTF_01206479;
- 80% Identity
- -