Pnap018869.1
Basic Information
- Insect
- Pieris napi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905475465.1
- Location
- FR997697.1:9560230-9732140[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-14 2.2e-11 43.7 0.0 1 40 311 350 311 353 0.93 2 2 1.4e-18 1.3e-15 57.2 0.0 1 43 516 559 516 561 0.95
Sequence Information
- Coding Sequence
- ATGGCGGAGTGCTCATTCGCGCGCTGTCAGCAGGAACGACGAGCGATCCGCAAGGAACTGCAACGTTGGACCAAAAACATGGTTTATATACTCGGTCTAGAACGGGTGGCAGAGGAGTTGATGGGTCGAAGAAAATGGAAACTGTATCAAGACGCATTGATTCCAAAGCAGCTAGAGGGCGAGCAGTCAAGCGGAGACGAATCCATGCCTGCCACAGACCACCCGCCCGCTCTCAAGATAAAGACCATAGAGCAGATCAACGAGTCAGAGGAGGCCGACGAACCGGTCAGAAAGGACTCAATCCTCGAAAGTCTTATCAAACGTCCAGCGACGGCACCCAAGGTAGAGCCTCAGGAGCCAGCAGACTGGAAACCAGCAGACAAGTGCTACTTCTGCGTCGACGAGCGTGGAGAACGGACGGACAGGGCGGAAGGGGCGGACGCCAGGGCGGACGCTAGGGCGGACGTGAGGGCGGGCGGCGCAAACAGTCCCGAATCGGAATCGGATAGCAGTTCCTTGTCGGGAGCAAAAAGTCCCGCTGGCGGGCCACTACTGCTGCAGCAGTTGCTGCAGTTGCAGCTGCAGGGGCAGAACCCGCAAGCGATAGCACAGGCTTACATGGAGATGTGTGTGCAGTTCCAACAGATGATTGCTGCGTTGGCTGCCCTCGGCTCGGGGCTGGTTCCGCCGGCACTGCCGCAGGCCTGGATGATGCAGAGGCTTCCAAGACCACCGCTCGATAGGCTAGACGCAGAGAAGGTGGGTGCAGGAAGTGCCTCTCCCACCATAGCGGAGCAACCCCTGGACTTAAGCGCCAAGTCTACTTCCAGCACCAGCGGCACACCGCCGCCGGAAAACAAAGGACAGGATAATGCGAGATTAAAGCGAGCTGTTCTTGAGGGCAAAAGCAATAGCACTCGGCGGAACTACACCGAGGATGATCTCCAATCTGCATTGAGGGATATCCAATCTGGGTTGGGCACACGAAGGGCCGCAGCACTATACGGCATCCCACGGTCCACGCTACGAAACAAGGTCAACAAACATGGTCTTACTCCAGAAGCGCCCGAGTCCGAGGACAGTGACCCCGAGAAGCCAGACACGCCATCATCTGTTATCCTCAAAATTCCCTCCTTCCCTCCTCCAGAGGACAAGAGCCCATCACCAGCCACGTCCGTCACGACCCCTGTGACGCCCATCACGCCGATATTACCTCCACAGTCGTCCCTAAATCACCCTTCACCTTTGCTACTTCCGGCTTCCGTGTACGCCGACCCACCCGCGGCTTCACAACACTTATTCACGTCTATGAGTGACGTCATAGCTAAGAGCATATGCCAAAAGTTCCAACAGCCCCTGGATAGGCCGCTTCAGCCTGACCTGTCTTACATGAGGGCGCCCGATCGACACGTCTCGGTCATAAAAACGCCACCGGATAATCAAAGAAATTACGCCGTACCCAGCAACTCCAAAGCGACAAATAACGGTCAGCCCGCCCAGGGTGGCAAAGGCACGAGACCAAAACGAGGTAAATACAGAAACTATGATCGAGACAGCCTCGTCGAGGCTGTGAAAGCGGTCCAGAGGGGCGAGATGTCCGTGCATCGGGCTGGCTCCTACTACGGTGTACCTCATTCCACTCTAGAATACAAAGTCAAAGAGCGGCATTTGATGCGGCCCCGAAAGAGGGAGCCTAAGCCGCCGCAGGAAACGAAGCCGCAGCCACCTAAACCGCCCCCTAAACCGACGAAGCCATTCACGAACGGAATGAACGGCCCCGAGGCGCCGGGCTACCCGGCCAACTATCCGTTCTGGGCGGGAGCCCGGTTCGCGCCGCCCGCGTCCGACCTCTACACGTCGCATATGATGCGGCGATTACACGGCGAGGCCCCACCGGCCAACGGGTTTCTCGAGGGCATCATCCGGTCGAGCCTGGAGGCACGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACGGCGGAGCCGCGCGCGGAGGCACCGAGCCTGGCGCGGCGGTTGGCTGGAGAGGTGGACGATGAGCCGGCGGCCCGGCGCCCTCGCCTGGACTCCGACCTGGCGTTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTTCGCGCCGACAAGCTGCGTCCGCGCAACGGTACGCCGACGCCGCCGCGTGCGCTATCGCCCGCCGCTCCTCCCGCCGCGCCGCCACACTCCGCCTAG
- Protein Sequence
- MAECSFARCQQERRAIRKELQRWTKNMVYILGLERVAEELMGRRKWKLYQDALIPKQLEGEQSSGDESMPATDHPPALKIKTIEQINESEEADEPVRKDSILESLIKRPATAPKVEPQEPADWKPADKCYFCVDERGERTDRAEGADARADARADVRAGGANSPESESDSSSLSGAKSPAGGPLLLQQLLQLQLQGQNPQAIAQAYMEMCVQFQQMIAALAALGSGLVPPALPQAWMMQRLPRPPLDRLDAEKVGAGSASPTIAEQPLDLSAKSTSSTSGTPPPENKGQDNARLKRAVLEGKSNSTRRNYTEDDLQSALRDIQSGLGTRRAAALYGIPRSTLRNKVNKHGLTPEAPESEDSDPEKPDTPSSVILKIPSFPPPEDKSPSPATSVTTPVTPITPILPPQSSLNHPSPLLLPASVYADPPAASQHLFTSMSDVIAKSICQKFQQPLDRPLQPDLSYMRAPDRHVSVIKTPPDNQRNYAVPSNSKATNNGQPAQGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQETKPQPPKPPPKPTKPFTNGMNGPEAPGYPANYPFWAGARFAPPASDLYTSHMMRRLHGEAPPANGFLEGIIRSSLEARPGAALLQRLTAEPRAEAPSLARRLAGEVDDEPAARRPRLDSDLALAAEMREAVQRLRADKLRPRNGTPTPPRALSPAAPPAAPPHSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01206479; iTF_01202395; iTF_01203965;
- 90% Identity
- iTF_01206479;
- 80% Identity
- -