Pnap015577.1
Basic Information
- Insect
- Pieris napi
- Gene Symbol
- dl
- Assembly
- GCA_905475465.1
- Location
- FR997707.1:6935202-6940600[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-22 2.3e-18 67.1 0.0 9 168 18 185 15 186 0.85 2 2 0.24 1.2e+03 -0.2 0.4 138 138 470 470 413 539 0.62
Sequence Information
- Coding Sequence
- ATGATGTCCAATAACTATGAGCCTCGTGTCGAATTTGATGTGAATGTGGCTAAAAGATATTTAAAATTCCGCTATGAGGAGCAGGGCCGCAAAGGTACCCCCATTTACGGAGAAACTAATGGTTCAAGGCAAACATTTCCTGCAATAAAAATTCATTGTCCTTTTGACACAACCGCAACAGTCCTAGTTTCTTGCTTCACTGACGACGTCAACGGAAAATACATGCCTCATCCAAATAAAATTGTGCGGCATCCCAAATGTGAGAATGGAGTCTCTGTAGTTGATGTGACAGTAAAATCCGGTCAGACAACGCATATATTCAAGGATATTGCTTTACAGCTAATTAAGAAAAATAGTGATACAGTCATCAAACAGTTAGACAAAAGAGTCATGTTTATGAGGAGAGCCGGTGCCAGAGACAATCCTTTTGGAGGACAGTACGCCTATCCCTTAAAGTTCGATATGTATCGTGTTAGAATTTGTTTTCAAGTATTGCTGAAAAAAGATGGTCGCATCATAGAATTGGAACCTTTAATAAGTGAGCCATTAATTGATTATCATGCAGTTAGTGATCTAAATATTCTTGAAATGTGTCCGGATGAGGGCAGAATAACAGGGAATACAAAAATAATGCTGCTTATAAAGAGAGTTAAGAAAACGGACAAGATTAGTGTTATATTTATGGATAAGGATTCCAAAGAGATCCCCGCAATAGTAGAAAGCACTCAGCCCTATGTCTTATCTAATGGCTATGGTGTACTTATATGTTACACGCCTAAAATCTATCTCGAAGATTCTGCTGGGTGGAAAGAGTTTGCAGTCAAAGTGAGATCAAATAACGTTGAAACTCTTGCTGAGAATATGCGAGGTTTTGTGTATAAAAGAATTTTATATCCTGATTCAGATTATTCGGAGGAAGCATATTTAAAAATGCTTAAGGAAAAAAAGGTTGCCTACAGCTTCATTGCCGAATTTGGTGAAACAATGAGCATTTCGAGTGACCAAGAAAATACTCAAATGGCGGCCCAAGAAGTTTATAACACACCCAGCACAAGTAACTCCTTCTATACTCAAAACATGCAAACTCATCCTGATGCAACTCCATCTGATTATCTTTTTCAAAAAAATTACTATATCGAAAACACCAGTAATAATTTTCATGCGAATAATGTTTACCTTACAAATAGCATGTATGAAACTCCAATTGATGTGTTACCAAACTTTAATTCCCTAAATTTACAAGCCAATAGACAGGACTACTTTCAAGATAACGGAACAAATACAGGAATTCAGCAGGACCATAATTCCAGAGTGGAGCAACAAAACACACAAGATAGACCGTTAATAATTGAACCGAGCAATAACATGCAAATTGATTTGGACAATTTAGATTTAATTGATTTATATCAAGATAACGGAACAAATACAGGAATTCAGCAGGACCATAATTCCAGAGTGGAGCAACAAAACACACAAGATAGACCGTTAATAATTGAACCAAGCAATAACATGCAAATTGATTTGGACAATTTAGATTTAATTGATTTATATCAAGATAACGGAACAAATACAGGAATTCAGCAGGACCATAATTCCAGAGTGGAGCAAAAAAACACACAAGATAGACCGTTATTTCAACCAAGCAATAACATGGAAATTGATTTGGAGACTTTAGATTTATTATAG
- Protein Sequence
- MMSNNYEPRVEFDVNVAKRYLKFRYEEQGRKGTPIYGETNGSRQTFPAIKIHCPFDTTATVLVSCFTDDVNGKYMPHPNKIVRHPKCENGVSVVDVTVKSGQTTHIFKDIALQLIKKNSDTVIKQLDKRVMFMRRAGARDNPFGGQYAYPLKFDMYRVRICFQVLLKKDGRIIELEPLISEPLIDYHAVSDLNILEMCPDEGRITGNTKIMLLIKRVKKTDKISVIFMDKDSKEIPAIVESTQPYVLSNGYGVLICYTPKIYLEDSAGWKEFAVKVRSNNVETLAENMRGFVYKRILYPDSDYSEEAYLKMLKEKKVAYSFIAEFGETMSISSDQENTQMAAQEVYNTPSTSNSFYTQNMQTHPDATPSDYLFQKNYYIENTSNNFHANNVYLTNSMYETPIDVLPNFNSLNLQANRQDYFQDNGTNTGIQQDHNSRVEQQNTQDRPLIIEPSNNMQIDLDNLDLIDLYQDNGTNTGIQQDHNSRVEQQNTQDRPLIIEPSNNMQIDLDNLDLIDLYQDNGTNTGIQQDHNSRVEQKNTQDRPLFQPSNNMEIDLETLDLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01203018; iTF_01204640;
- 90% Identity
- -
- 80% Identity
- -