Pmad015870.1
Basic Information
- Insect
- Pieris macdunnoughii
- Gene Symbol
- dl
- Assembly
- GCA_905332375.1
- Location
- CAJOBZ010000075.1:400551-405785[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-23 3.1e-19 69.5 0.0 9 168 18 185 15 186 0.84 2 2 0.68 2.8e+03 -2.0 0.1 95 113 428 446 413 501 0.60
Sequence Information
- Coding Sequence
- ATGATGTCCAATAACTATGAGCCTCGTGTTGAATTTGATGTGAATGTGGCTAAAAGATATTTCAAatTCCGCTATGAGGAGAAGGACCGCAATGGTACCACCATTTACGGAGAATCTAATGGTTCAAGGCGAACATTTCCCTCAATAAAAATCCATTGTCCTTTTGACACAACCGCAACAGTCCTAGTTTCTTGCTTCACTGACGACGTCAACGGAAAACAcatacCTCATCCAAATAAAATTGTGCGGCATCCAAAATGTGAGGATGGAGTCTGTGTAGTTGATGTGACAATAAAATCCGGTCAGACAACGCAGATATTCAAGGATATTGCTTTACAGCGAATTAAGAAAGATGAGACAGCCATCGAAGAGCTGTTATGGAAAAGATCGAGATTTATGAGGATAGCCGGTGCCAGATACAATCCTTTTGGAGGAAAGTTCATCGTTCCCTCAAAGTTTAATATGGATTGTGTTAGAATTTGTTTTCAAGTATTGCTGAAAAAAGATGGTCGCGTCATGGAATTGGAACCTTTAATAAGTGAGCCATTAATTGATTATCTAGCAGTTAGTGATCTAAATATTCTTGAAATGTGTCCGGATGAGGGCAGAATAACaggaaatacaaaaataatgctGATTATAAAGAGAATTAAGAAAACGGACAACATTAGTGTTATATTTATGGATAAGGATTCCAAAGAGATCCCCGCAAAAGTAGAAAGGACTCAGCCCTATGTCTTATCTAATGGCTATGGTGTACTTATATGTTACACGCCTAAAATCTCTCTCGATGATTCTGCTGGGTGGAAAGagtttgcaGTCAAAGTGAGATCAAATAACGATGAAACTCTTTCTGAGAATATGCGAGGTTTTGTGTATAAAAGAATTTTCTATCCTGATTCAgatTATTCAGAGGAAGCATATTTGAAAATGCTTAAGGAAAAAAAGGTTGCCTACAGCTTGATTGCCGAATTAGGTGAAACAATGAGCATTTCGAGAGACCAAGAAAATACTGTAACGGCGGCCCAAGAAGTTTATAACACACCCAGCACAAGTAACTCCTTCTATACTCAAAACATGCAAACTCATCCTGATGCAACTCCATCTAATTatctttttcaaaaaaattactatatcGAAAACACCAGTAATAATTTTCATGCGAATAATGTTTACCTTACAAATAGCATGTATGAAACTCCAATTGATGTGTCACCTTGCTTAAATACCCAAATTATTGAACATGAAAATGAACACTACTACTTTCAAGATAACGGAACAAATACAGGAATTCAGCAGGACCATAATTCCAGAGTGGAGCAACAAAACCCACAAGATAGACTGTTAATTCAACCAAGCAATAACATGGAAATCAATTTGGGGaatttagatttaattgatttttctcAAGATGACGGAACAAATACAGGAATTCAGCAGGACCATAATTCCAGAGTGGAGCAACAAAACACACAAGATAGACCGTTAATTCAACCAAACAATAACATGGAAATTGATTGGGAGACTAGAATTATAGATGAATGTTTTGGACTATAG
- Protein Sequence
- MMSNNYEPRVEFDVNVAKRYFKFRYEEKDRNGTTIYGESNGSRRTFPSIKIHCPFDTTATVLVSCFTDDVNGKHIPHPNKIVRHPKCEDGVCVVDVTIKSGQTTQIFKDIALQRIKKDETAIEELLWKRSRFMRIAGARYNPFGGKFIVPSKFNMDCVRICFQVLLKKDGRVMELEPLISEPLIDYLAVSDLNILEMCPDEGRITGNTKIMLIIKRIKKTDNISVIFMDKDSKEIPAKVERTQPYVLSNGYGVLICYTPKISLDDSAGWKEFAVKVRSNNDETLSENMRGFVYKRIFYPDSDYSEEAYLKMLKEKKVAYSLIAELGETMSISRDQENTVTAAQEVYNTPSTSNSFYTQNMQTHPDATPSNYLFQKNYYIENTSNNFHANNVYLTNSMYETPIDVSPCLNTQIIEHENEHYYFQDNGTNTGIQQDHNSRVEQQNPQDRLLIQPSNNMEINLGNLDLIDFSQDDGTNTGIQQDHNSRVEQQNTQDRPLIQPNNNMEIDWETRIIDECFGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01205474;
- 90% Identity
- -
- 80% Identity
- -