Basic Information

Insect: Pieris mannii
Gene Symbol: -
Assembly: GCA_029001895.1
Location: CM054850.1:2132637-2137840[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 0.19 16 6.7 2.6 3 23 167 187 165 187 0.95

2 30 0.021 1.8 9.8 0.1 1 23 191 213 191 213 0.95

3 30 0.064 5.4 8.3 0.2 1 15 218 232 218 241 0.78

4 30 0.0022 0.19 12.8 1.2 1 23 247 270 247 270 0.96

5 30 4e-05 0.0034 18.3 2.7 1 23 277 300 277 300 0.98

6 30 4.7e-06 0.0004 21.3 3.5 1 23 307 329 307 329 0.98

7 30 0.00051 0.043 14.9 0.4 1 23 398 421 398 421 0.98

8 30 0.016 1.3 10.2 0.3 2 23 448 470 447 470 0.90

9 30 0.00021 0.018 16.1 3.2 1 23 492 514 492 514 0.99

10 30 0.00024 0.02 15.9 0.5 1 23 518 540 518 540 0.97

11 30 2.8 2.4e+02 3.1 0.1 1 22 574 595 574 597 0.86

12 30 0.0083 0.71 11.1 4.0 1 23 604 627 604 627 0.98

13 30 0.075 6.4 8.0 0.3 1 23 690 712 690 712 0.92

14 30 0.14 12 7.2 0.0 2 23 736 758 735 758 0.93

15 30 0.019 1.6 9.9 3.2 2 23 781 802 780 802 0.96

16 30 0.0037 0.31 12.2 3.3 3 23 808 828 807 828 0.97

17 30 0.0006 0.051 14.6 1.5 2 23 834 856 833 856 0.91

18 30 6.6e-05 0.0056 17.7 1.8 1 23 862 885 862 885 0.97

19 30 0.0021 0.18 12.9 0.8 1 23 891 914 891 914 0.96

20 30 0.00025 0.021 15.8 0.3 1 23 920 942 920 942 0.95

21 30 0.00015 0.013 16.5 0.4 1 21 948 968 948 969 0.97

22 30 0.0095 0.8 10.9 0.1 2 23 1069 1090 1068 1090 0.96

23 30 0.052 4.4 8.6 4.8 1 23 1112 1134 1112 1134 0.97

24 30 0.0044 0.38 11.9 0.4 1 23 1138 1160 1138 1160 0.98

25 30 0.13 11 7.3 0.1 1 23 1165 1188 1165 1188 0.95

26 30 5.4e-05 0.0046 17.9 1.5 1 23 1194 1217 1194 1217 0.98

27 30 0.01 0.87 10.8 0.9 1 23 1224 1247 1224 1247 0.97

28 30 0.0039 0.33 12.1 2.0 1 23 1253 1275 1253 1275 0.94

29 30 1.6e-06 0.00013 22.8 1.0 1 23 1281 1303 1281 1303 0.99

30 30 1.7e-06 0.00015 22.6 2.6 1 23 1309 1331 1309 1332 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	0.19	16	6.7	2.6	3	23	167	187	165	187	0.95
2	30	0.021	1.8	9.8	0.1	1	23	191	213	191	213	0.95
3	30	0.064	5.4	8.3	0.2	1	15	218	232	218	241	0.78
4	30	0.0022	0.19	12.8	1.2	1	23	247	270	247	270	0.96
5	30	4e-05	0.0034	18.3	2.7	1	23	277	300	277	300	0.98
6	30	4.7e-06	0.0004	21.3	3.5	1	23	307	329	307	329	0.98
7	30	0.00051	0.043	14.9	0.4	1	23	398	421	398	421	0.98
8	30	0.016	1.3	10.2	0.3	2	23	448	470	447	470	0.90
9	30	0.00021	0.018	16.1	3.2	1	23	492	514	492	514	0.99
10	30	0.00024	0.02	15.9	0.5	1	23	518	540	518	540	0.97
11	30	2.8	2.4e+02	3.1	0.1	1	22	574	595	574	597	0.86
12	30	0.0083	0.71	11.1	4.0	1	23	604	627	604	627	0.98
13	30	0.075	6.4	8.0	0.3	1	23	690	712	690	712	0.92
14	30	0.14	12	7.2	0.0	2	23	736	758	735	758	0.93
15	30	0.019	1.6	9.9	3.2	2	23	781	802	780	802	0.96
16	30	0.0037	0.31	12.2	3.3	3	23	808	828	807	828	0.97
17	30	0.0006	0.051	14.6	1.5	2	23	834	856	833	856	0.91
18	30	6.6e-05	0.0056	17.7	1.8	1	23	862	885	862	885	0.97
19	30	0.0021	0.18	12.9	0.8	1	23	891	914	891	914	0.96
20	30	0.00025	0.021	15.8	0.3	1	23	920	942	920	942	0.95
21	30	0.00015	0.013	16.5	0.4	1	21	948	968	948	969	0.97
22	30	0.0095	0.8	10.9	0.1	2	23	1069	1090	1068	1090	0.96
23	30	0.052	4.4	8.6	4.8	1	23	1112	1134	1112	1134	0.97
24	30	0.0044	0.38	11.9	0.4	1	23	1138	1160	1138	1160	0.98
25	30	0.13	11	7.3	0.1	1	23	1165	1188	1165	1188	0.95
26	30	5.4e-05	0.0046	17.9	1.5	1	23	1194	1217	1194	1217	0.98
27	30	0.01	0.87	10.8	0.9	1	23	1224	1247	1224	1247	0.97
28	30	0.0039	0.33	12.1	2.0	1	23	1253	1275	1253	1275	0.94
29	30	1.6e-06	0.00013	22.8	1.0	1	23	1281	1303	1281	1303	0.99
30	30	1.7e-06	0.00015	22.6	2.6	1	23	1309	1331	1309	1332	0.96

Sequence Information

Coding Sequence: ATGGGTATTGGAAGAAGTTGGACGCAAGCTTATACAAGTTTTCTATTTCTAGGGCAAGGGAATTTTGAGATTGAAGCAATAAAGGTAGAGAAGGTTTGTAAGAAGCCAAAGTATCAGAAAAGCAAAAGCGCTGAGGCACGTCTTTCAATGAAAAAGAACGCAACGACTATATTAGAATGTTGGAGAATCATACCTTTTAGATGGaagaaaaatcattttaaatgtgCATTCTGCGAGAATGTCTTCACGTGTTGTACTGAGTTACGGGAGCATGTCAAAGTATGTTCGACGCATCACAGTGTGAAAGATATATACAGCAAGTTTAAAGAAATGTCCCTGATTAATGTGGACGTCACCAACGCAGTGTGTAGGCTCTGTGCATGCCCCTTTTACAGCGTTCCACAGATGAGACAGCATGTTATTGAACATGGCCTGGATTTCGATAGCTCTCACCCGGATGGCGTCCTACCTTTCAGTCTGGATAACAATCTTTGGTGCTGCCTGATATGCCGAGAGAAATTCAACAATTTCCTCAAATTATATGAACATATGAATTCGCATTATCAGCATTATATATGTGCAACCTGCGGCAAGGGATACATGACTGCGCCGAGGTTGAGAAAGCATTCAGAAGTCCATTTAAAGGGTTCGTACCCGTGTGAAAAGTGCGGGCGTATGTTCACAATGCGTGCCGCCAGAGATTATCATAAAGCGAACGTGCACGCCAAAGGACCTAGATACGAATGCCCGCATTGTGACATGAGATTCTCTGGATACTATGATAGGATGAATCACCTGAATCAAGCCCATAGAGCTAAAGAGGTCGCATACGAATGCTCCCACTgtgataaaacatttaaaactagtggCCAGCGTTCGGTTCATGTCCGGCGAGAGCATTTTCCGCAGCAACGGAACTACAATTGTGATTATTGCGAATGGcactttaaaacaaattatgaatTGAAACGGCATATGATAAAGCATTCCGGGCCTATTGCGGGTACTCGGGCTAAAGGTAGAAAGTTGAAAGAGCACGTCAGCGCTCGCCAAATGCTTAGGCGGCGGCGTGCGAATAACGAACTCCCAGAAGAGTCAGAGAGACGCATCGCTAAGACTATGATGCAAAGAAACGCGATAGTCCTCTTAGAGTGTTCCACAGCTTGGCCATTTCGCTGGTTCCGATGCGCGTATTACTGCTCCTACTGTGATATCAAATTCCTTGAACCAAGTGATTTGCGTGATCATATACGATCCAACCATTTACACCAACAACCCACCAAAAAACTATTCGCAAAGCTCACAGAGAATAATATGCTGAAAGTCGAAATTTCTGACTTGAAGTGCAGACTCTGCGGGCTTAGTTTTAATAGTTTTGACGGTTTCAAAGAGCATTTGGTTTTGGTGCATCATAAAAAGTTGTACGCTAATTATAGCGATGGCGTACTGCCGTTTAAGCTTAGCTCCAATGATTTCAAATGCCCCAAATGTCACATCCGCTTTGCGTCTTTCTCGAAAATGAATGAGCATATGAACAGCCATTTTAGGAATTATATTTGTGATACGTGCGGCAAAGGATTCGTGTCGAAATCCCGGTTTAGAGGTCACGTACAATCTCATGAGGTTGGTAGTTTCCCTTGCGGTATATGTGATGAGGTCTTGGAGACGAGAACGGCTCGTATGTGTCATAGAGTTAAGGTACACCTTAAAGGCGTTAAGTATGCATGCCCTCGCTGTCCGGATGTGTTTAGTAAATATAACGCGCGTCTCAAACATTTAGTTGAGATACATGGGCagcagaaaatttattatccCTGCGTTCATTGTGAAAAGATATTCGAGACGAGCTGCAATAGGTCGGCCCACTATAGGACGTCACATGGAATCGGAAAGAAGTGTTCGGATTTGAATAACTCTTGGAATGATAAACGAACGGATAgaCCAGACAATAAGCAACCAACGAAACTATTATGGAAACAGAAAAGGAAATTTAACGATCAAAGAGACAACGCGGCTGTAGTTCTTGAGTGTTCTAACGCTTGTCCGTTTAGGTGGAGACGTGGCTGTTACACCTGCGCGTTCTGTCCGAAAAATTTTGCCGATTTCGAGTCTATAAAGGAACACTCTATAGAGCATCCAAACAAAGTGGATGCACTTAAATTCGCGCGTACTTTTGACTATGTTAAAGTTGAAGTAACTAATTTACAATGTAACATATGCCGTGAACCAATGCCGGATTTAGATAATTTGAAAGACCACCTCGTGGTGGTTCATCAGAAACCTGTCATCAAAGAGTTAGATTTAGGCGTTACGCCATTTTTACTGATGAACAAAGAGCTGTCTTGTACACACTGCGGTGAACGATTCCTGCAGTTcactaaattaaatacacacaTGAATCAACATTATCCAAATAACATTTGCTGTCACTGCGGTAAAGCGTTCTCCGCTGCCCATAGATTAAAAGCACATCAAATAATAcacgaaacagataataataaatgtacgaGGTGCGATAAAGTATTCGATACCAGAGTTCAATTCAATAGGCACGTTTATTTAACGCACACGTCGGAATTTAGGTATCGTTGCCCCTACTGTAATGAAGTGTTTAAAACGTACTCGGAACGTCTGAAGCATTTGAAAAACTCGCATGGTAAAAAAGTCGAATATCCTTGCAACTTTTGTCCAAGAGTATTTTCTATGTACAATCAGAGGACTAGACATATACAGCAGGTCCATATTAAACATAGGCCGTTTCTCTGCGAACAGTGTCCGTACAAGTTTGGAACCGCCGCACAGCTTAGGAACCATATGGTGAAGCATGAGGGAGAGAGGAAATTTCAATGTGAAGTCTGTAAGAAAATGTATGCGAGGATGAAGACTCTGAAAGAACACATGCgagGAAAAGCTGAGCTTAAAGAGGAAGATAACGATTACACAGCAATAACGAGTAATGATGACGTTAACAAGAGACTAGAAGGAAACGCGCGACGGGCAATGTTCagaaagaatataaaaaatattcttactaCATGCACTGCCTACCCGTTTAAGTACAGAAAGGGGGCGTACCTCTGTTTCTTTTGCAAAAGTAGCTTCCTGGAGCCACAGTTGTTAAGGGAACATTCTCAAAGGCATCACTCGGATATAGCTTTCAAACCACGTAAATACGATCCGTTGAAAATGGATTTCTCAGTCACAGTGTGCAGACTCTGCGGCGTTGATATAAAAGATTATtcagaattaaaaatacacttgAGGGTTCACGGCAAAAGTATCGATTGCACGTACGGCGAGAGTATTTTGCCGTATAAATTGAGTAAGGACGAATATTGTTGTCAAGTCTGCGGTAAACGTTATGAAATGTTTCTAAGTTTACATAAACATATGAACGACCATTACGAGCATTATATTTGTGAGACTTGCGGCAAAGGCTTTGCCACGATTCAGAGAATGTTGAATCACTCCCGTACTCACGAAAAAGGTAGTTTCCCATGCAAGCACTGTGGTGAACTGCTCCAATCGTACGCTGGCCTATACGCGCATATAGCGAAAGTACATAAGTCGAATAAGCGTTACAAATGTCCTATTTGCGACGAGAAATTCTCCTCCTATAAGTATAGGATGAAACACTTGAACACGATACATAATGAAAAGACTGCTCTATTTCCTTGCCCATCATGCCCCAAAGTTTTCGACCTGTGTAGTCGAAGGACAGCGCACATCCGCTCCCAACACTTGCAGGAAAGGAACCACGCCTGTACCACATGTGGAATGAAGTTCTTTTCCAACTACGAACTGCAAGAGCACAGTATTAAACACGGTGGCGCCAGGATATACCAGTGTGATGTCTGCAAAAAGTCGTATGCGCGTTTGAAAACATTAAGGGAACATATGAGAATTCATAATAATGATAGGAGATTCGTCTGCCCCATTTGTGGACAATCGTTTATACAGAAGTGCAGTCTGAAGCAACACGTGAGGGTTCATCATCCAATGCAGATTAAAGATGGCTTCTAA
Protein Sequence: MGIGRSWTQAYTSFLFLGQGNFEIEAIKVEKVCKKPKYQKSKSAEARLSMKKNATTILECWRIIPFRWKKNHFKCAFCENVFTCCTELREHVKVCSTHHSVKDIYSKFKEMSLINVDVTNAVCRLCACPFYSVPQMRQHVIEHGLDFDSSHPDGVLPFSLDNNLWCCLICREKFNNFLKLYEHMNSHYQHYICATCGKGYMTAPRLRKHSEVHLKGSYPCEKCGRMFTMRAARDYHKANVHAKGPRYECPHCDMRFSGYYDRMNHLNQAHRAKEVAYECSHCDKTFKTSGQRSVHVRREHFPQQRNYNCDYCEWHFKTNYELKRHMIKHSGPIAGTRAKGRKLKEHVSARQMLRRRRANNELPEESERRIAKTMMQRNAIVLLECSTAWPFRWFRCAYYCSYCDIKFLEPSDLRDHIRSNHLHQQPTKKLFAKLTENNMLKVEISDLKCRLCGLSFNSFDGFKEHLVLVHHKKLYANYSDGVLPFKLSSNDFKCPKCHIRFASFSKMNEHMNSHFRNYICDTCGKGFVSKSRFRGHVQSHEVGSFPCGICDEVLETRTARMCHRVKVHLKGVKYACPRCPDVFSKYNARLKHLVEIHGQQKIYYPCVHCEKIFETSCNRSAHYRTSHGIGKKCSDLNNSWNDKRTDRPDNKQPTKLLWKQKRKFNDQRDNAAVVLECSNACPFRWRRGCYTCAFCPKNFADFESIKEHSIEHPNKVDALKFARTFDYVKVEVTNLQCNICREPMPDLDNLKDHLVVVHQKPVIKELDLGVTPFLLMNKELSCTHCGERFLQFTKLNTHMNQHYPNNICCHCGKAFSAAHRLKAHQIIHETDNNKCTRCDKVFDTRVQFNRHVYLTHTSEFRYRCPYCNEVFKTYSERLKHLKNSHGKKVEYPCNFCPRVFSMYNQRTRHIQQVHIKHRPFLCEQCPYKFGTAAQLRNHMVKHEGERKFQCEVCKKMYARMKTLKEHMRGKAELKEEDNDYTAITSNDDVNKRLEGNARRAMFRKNIKNILTTCTAYPFKYRKGAYLCFFCKSSFLEPQLLREHSQRHHSDIAFKPRKYDPLKMDFSVTVCRLCGVDIKDYSELKIHLRVHGKSIDCTYGESILPYKLSKDEYCCQVCGKRYEMFLSLHKHMNDHYEHYICETCGKGFATIQRMLNHSRTHEKGSFPCKHCGELLQSYAGLYAHIAKVHKSNKRYKCPICDEKFSSYKYRMKHLNTIHNEKTALFPCPSCPKVFDLCSRRTAHIRSQHLQERNHACTTCGMKFFSNYELQEHSIKHGGARIYQCDVCKKSYARLKTLREHMRIHNNDRRFVCPICGQSFIQKCSLKQHVRVHHPMQIKDGF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01203427;
90% Identity: iTF_01206742;
80% Identity: -