Pmad005954.1
Basic Information
- Insect
- Pieris macdunnoughii
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905332375.1
- Location
- CAJOBZ010000012.1:4103159-4104991[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-15 9.3e-12 44.4 0.0 1 40 71 110 71 113 0.93 2 2 5.5e-19 5.4e-16 57.9 0.0 1 43 276 319 276 321 0.95
Sequence Information
- Coding Sequence
- ATGCAAGATGAAACCGAAGACTGTCGATTTAAAGCGAACGAATTTATACCGTATAATCGGGGTTCAGCGTTCAATTTCGATGGGGATCAAATCGGAAATAAAAGACGAATGGAAAAAGATAAAGATGCATTCATAGTAGACCGTTATCGGATGGACAAATTAAAGCGAGCTGTTCTTGAGGGCAAAAGCAATAGCACTCGGCGGAACTACACCGAGGATGATCTCCAATCTGCATTGAGGGATATCCAATCTGGGTTGGGCACGCGAAGGGCCGCAGCACTTTACGGCATCCCACGGTCCACGCTACGAAACAAGGTCAACAAACATGGTCTTACTCCAGAAGCACCCGAGTCCGAGGACAGTGACCCCGAGAAGCCAGACACGCCATCATCTGTAATCCTCAAAATTCCCTCCTTCCCTCCTCCAGAGGACAAGAGCCCATCACCAGCCACGTCCGTCACGACCCCTGTGACGCCCATCACGCCGATATTACCTCCACAGTCGTCCCTAAATCACCCTTCACCTTTGCTACTTCCGGCTTCCGTGTACGCCGACCCACCCGCGGCTTCACAACACTTATTCACGTCTATGAGCGACGTCATAGCTAAGAGCATATGCCAAAAGTTCCAACAGCCCCTGGATAGGCCGCTTCAGCCTGACCTATCTTACATGAGGGCGCCCGATCGACACGTCTCGGTCATAAAAACGCCACCGGATAATCAAAGAAATTACGCCGTACCCAGCAACTCCAAAGCGACAAATAACGGTCAGCCCGCCCAGGGTGGCAAAGGCACGAGACCAAAACGAGGTAAATACAGAAACTATGATCGAGACAGCCTCGTCGAGGCGGTGAAGGCGGTCCAGAGGGGCGAGATGTCCGTGCATCGGGCTGGCTCCTACTACGGTGTACCTCATTCCACCCTAGAATACAAAGTCAAAGAGCGGCATTTGATGCGGCCCCGAAAGAGGGAGCCTAAGCCGCCGCAGGAAACGAAGCCGCAGCCACCTAAACCGCCCCCTAAACCGACGAAGCCATTCACGAACGGAATGAACGGCCCCGAGGCGCCGGGCTACCCGGCCAACTATCCGTTCTGGGCCGGAGCCCGGTTCGCGCCGCCCGCGTCCGACCTCTACACGTCGCATATGATGCGGCGACTACACGGCGAGGCCCCACCGGCCAACGGGTTCCTCGAGGGCATCATCCGGTCGAGCCTGGAGGCACGGCCGGGCGCGGCGCTGCTGCAGCGGCTGACAGCGGAGCCGCGCGCGGAGGCACCGAGCCTGGCGCGGCGGTTGGCTGGAGAGGTGGACGATGAGCCGGCGGCCCGGCGCCCTCGCCTGGACTCCGACCTGGCGTTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTACGCGCCGACAAGCTGCGTCCGCGCAACGGTACGCCGACGCCGCCGCGTGCGCTATCGCCCGCCGCTCCTCCCGCCGCGCCGCCACACTCCGCCTAG
- Protein Sequence
- MQDETEDCRFKANEFIPYNRGSAFNFDGDQIGNKRRMEKDKDAFIVDRYRMDKLKRAVLEGKSNSTRRNYTEDDLQSALRDIQSGLGTRRAAALYGIPRSTLRNKVNKHGLTPEAPESEDSDPEKPDTPSSVILKIPSFPPPEDKSPSPATSVTTPVTPITPILPPQSSLNHPSPLLLPASVYADPPAASQHLFTSMSDVIAKSICQKFQQPLDRPLQPDLSYMRAPDRHVSVIKTPPDNQRNYAVPSNSKATNNGQPAQGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQETKPQPPKPPPKPTKPFTNGMNGPEAPGYPANYPFWAGARFAPPASDLYTSHMMRRLHGEAPPANGFLEGIIRSSLEARPGAALLQRLTAEPRAEAPSLARRLAGEVDDEPAARRPRLDSDLALAAEMREAVQRLRADKLRPRNGTPTPPRALSPAAPPAAPPHSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01204807; iTF_00878794; iTF_00357345; iTF_00358444; iTF_00796446; iTF_00430565;
- 90% Identity
- iTF_00430565;
- 80% Identity
- -