Cbeh025139.1
Basic Information
- Insect
- Colias behrii
- Gene Symbol
- Mblk-1
- Assembly
- GCA_029959075.1
- Location
- JARWMB010000024.1:2391549-2394487[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-14 1.2e-11 45.1 0.0 1 39 71 110 71 113 0.94 2 2 3.6e-18 1.2e-15 57.9 0.0 1 43 277 320 277 322 0.95
Sequence Information
- Coding Sequence
- ATGCAAGATGAAACCGAAGACTATCGATTCGACGCGAACGATTCTAAACCGTATAATGAAGGTTCAGCGTTCAAATTCGATGCGAACCGAATCGGAAATAAAAGACGAATGGAAAAAGATAAAGATGCATTCTTAGTAGACCGTTATCGGGTGGACAAATTAAAACGTTCCGCGCTAGATGGCGCCGGCAACAGTACGCGGCGCAACTACACGGAAGACGAGCTGCAGTCCGCCCTCAGAGATATACAGTCAGGGCGCCTCGGCACGCGCCGCGCCGCCGCAGTGTACGGCATCCCGCGCTCCACACTGCGCAACAAGGTCAACAAGCATGGCCTCGCACCCGAAGCCCAGGAGTCCGACCCCGACAGCGACCCTGAGAAACCAGAGACGCCCTCCTCCGTCATCCTCAAGATACCCTCCTTCCCGCCCCCCGATGATAAGAGCTCGTCGCCCGCCACGCCGGTCACCACGCCCGTGACCCCCATCACCCCGCTCCTCCCCCCGCAGCCGTCGCTCAACCCGCCCTCGCAGCTGCTGCTTCCGCCCTCGGTGTTCGCCGACCCGCCGGCCTCGCAACACCTCCTCACGTCCATCAGCGACGTCATCGCGAAAAGCATAAGCCAAAAGTTTCAACAGCCTCTCGATAGGCCTCCCCAACTCGACTTGTCTTACATGCGAGCGCCCGACCGACACGTGTCGGTAATCAAGACGCCGCCGGATAACCAGAGAAATTACGCCGTACCGAGCAACTCGAAAGCGACGAACAATGGACAGCCCGCGACCGGCGGCAAAGGCACGCGGCCCAAACGGGGCAAGTATCGGAACTACGACAGGGACAGCCTCGTCGAAGCGGTCAAGGCCGTGCAGCGAGGCGAGATGTCCGTGCACAGAGCGGGCTCCTACTACGGCGTGCCGCACTCGACCCTCGAATACAAAGTGAAGGAGCGGCACCTGATGCGGCCGCGAAAGCGCGAGCCGAAGCCGCAGCAGGACGCGAAGCCGCAGCCGCCGAAGCCGCCTATGAAGCCGCCGACGAAGCCGTTCACGAACGGGCTCAACGGGCCCGAGGCGCCCGGCTACCCGGCCGGCTACCCCTTCTGGCCCGGCGCAGGCTTCGCGCCGCCCGCCTCCGACCTGTACACGTCGCACATGATGCGGCGGCTGCGCGGCGAGGCGCCGCCGCCCGCCAACGGCTCCTTCCTCGAGGGCATCATCCGCTCGAGCCTCGAGCGGCCCGGCgccgcgctgctgcagcggctcACCGCGGAGCCGCGCGGCGAGGCGCCCAGCCTGCTGCGGCGGCTGGCCGGCGAGCCCGACGACGagcccgccgcgcgccgcccgcgccTCGACTCGGACCACCAGCTGGCGGCCGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCCcacgccgcccgccgcgcccgaGCCGGCCGGCGCGCTGCCCCCCCCGCACGCGCCGCACCCCGCGCCGCACCCCGCCTAG
- Protein Sequence
- MQDETEDYRFDANDSKPYNEGSAFKFDANRIGNKRRMEKDKDAFLVDRYRVDKLKRSALDGAGNSTRRNYTEDELQSALRDIQSGRLGTRRAAAVYGIPRSTLRNKVNKHGLAPEAQESDPDSDPEKPETPSSVILKIPSFPPPDDKSSSPATPVTTPVTPITPLLPPQPSLNPPSQLLLPPSVFADPPASQHLLTSISDVIAKSISQKFQQPLDRPPQLDLSYMRAPDRHVSVIKTPPDNQRNYAVPSNSKATNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDAKPQPPKPPMKPPTKPFTNGLNGPEAPGYPAGYPFWPGAGFAPPASDLYTSHMMRRLRGEAPPPANGSFLEGIIRSSLERPGAALLQRLTAEPRGEAPSLLRRLAGEPDDEPAARRPRLDSDHQLAAEMREAVQRLRADKLRPRNGTPTPPAAPEPAGALPPPHAPHPAPHPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01203172;
- 90% Identity
- iTF_00358444;
- 80% Identity
- -