Hass015876.1
Basic Information
- Insect
- Hestina assimilis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_016906905.1
- Location
- JAFDUZ010000022.1:2734320-2742244[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1 4.6e+03 -2.0 0.0 11 22 90 103 89 103 0.85 2 3 4.5e-15 6.5e-12 45.5 0.0 1 39 105 144 105 149 0.93 3 3 6.5e-19 9.5e-16 57.8 0.0 1 43 314 357 314 359 0.95
Sequence Information
- Coding Sequence
- ATGGCAACCCTGAGAAGGGTGGCAGTCGGTGTGACTCCGACTAACGTCCGCGTCTGGGTGGGAAACGTAAGGGGACATTCCATCTCGCCCCCCTGGGACCGAGCTTTGCCAGAACACAGGCTGTCAGAAAGCGATAAGGTTGCCGCACGTTGCTCGTCCCCAACGGTCACGGAACAGCCCCTCGACCTGAGCGCTAAGTCTACTTCCAGCACCAGCGGTACCCCACCACCAGACTCTAAGAACCTTGACAACGCCAGATTAAAACGCGCCGTCCTCGAGGGATCTAGTAATACCTCGACAAGACGTGCTTACACCGAGGATGAGCTGCAGTCTGCTCTACGGGACATCCAGTCCGGCCGATTGGGCACACGGCGCGCCGCCGTCGTGTACGGCATCCCACGCTCCACGCTGCGCAACAAGGTCAACAAGTTCGGTCTCACGTCTGATACCGGGCAGGAGTCCGACCCGGACAGCGAGTCTGATAAACCGGAGTCGCCACCATCCGTTATCCTCAAGATACCAACTTTCCCACCTCCGGACGACAAGAGTCAGTCACCCGCAACGCCAGTCACTACACCGGTCACGCCTATCACGCCAATTCTGCCGCCACAACCACAGCTGAATGCGTCGTCTCTCCTACTTCCACCGTCAGTCTTCGCGGATCCACCTTCGAGTCAGCATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAGCCTCTCGATAGACCACCCCAGCCTTCGGATTTACCTTACATGCGAGCGCCTGACCGACATGTATCCGTAATAAAAACGCCGCCAGACAATCAGAGAAACTACGCCATGCCAAGCAATTCTAAAGCGATGCCGAACAACAACGGGCAGCCGGCGACAGGCGGGAAGGGGACGAGACCCAAACGAGGGAAGTATCGAAATTACGACAGGGATAGCCTCGTCGAGGCTGTGAAAGCGGTACAGCGTGGTGAGATGTCCGTACACCGTGCCGGTTCATACTACGGCGTCCCACATTCTACACTGGAGTACAAAGTGAAAGAGCGGCACCTAATGCGGCCGCGAAAGCGAGAGCCGAAGCCACAGCAAGACGTAAAGCCGCAGCCACCCAAGCCACCACCGAAGCCACCAACGAAGCCTTTTACGAACGGGCTCAATGGCCCTGAAGGCGGCGGCTACCCGGGTGGGTACCCGTTCTGGCCGGGCGCTGGATTCGCGCCACCGCCAGCACCGGACCTGTACGCATCGCATATGATGCGGCGCCTGCGCGAAGAGGCCCCGCCACCGGCGAACGGCTCCTTCCTCGAGGGCATCATCCGGTCGAGCCTCGAGCGTCCCGGCGCGGCGCTACTGCAGCGGCTTAGCGCTCCCGCGTCGCCCCCGGGCCCAGGAGGCGTCCGGCGGCGCGGTGAGCCGGGCGACGAGCCGGCCGCGCGGCGTCCGCGCCTCGACTCCGACCACCGGCTCGCGGCCGACATGCGCGAGGCGGTGCAGCGGCTGCGCGCGGACAAGCTGCGGCCACGCAACGGCACGCCTACGCCACCGCCCGCCTCGCCCTCAGGGGCCGCGGGGGCCGCTGGGGCAGCGGGGGGCGTGGGGGAGCGCGCCTAG
- Protein Sequence
- MATLRRVAVGVTPTNVRVWVGNVRGHSISPPWDRALPEHRLSESDKVAARCSSPTVTEQPLDLSAKSTSSTSGTPPPDSKNLDNARLKRAVLEGSSNTSTRRAYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLTSDTGQESDPDSESDKPESPPSVILKIPTFPPPDDKSQSPATPVTTPVTPITPILPPQPQLNASSLLLPPSVFADPPSSQHLXXXXXXXXXXXXXXXXQQPLDRPPQPSDLPYMRAPDRHVSVIKTPPDNQRNYAMPSNSKAMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDVKPQPPKPPPKPPTKPFTNGLNGPEGGGYPGGYPFWPGAGFAPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGAALLQRLSAPASPPGPGGVRRRGEPGDEPAARRPRLDSDHRLAADMREAVQRLRADKLRPRNGTPTPPPASPSGAAGAAGAAGGVGERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01203172;
- 90% Identity
- -
- 80% Identity
- -