Basic Information

Insect: Phyto melanocephala
Gene Symbol: RREB1
Assembly: GCA_941918875.1
Location: CALNXE010002143.1:10040-15958[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.025 2 9.6 1.7 1 21 233 253 233 255 0.95

2 12 0.00043 0.035 15.2 0.2 1 23 265 287 265 287 0.98

3 12 3e-05 0.0024 18.8 7.5 1 23 293 315 293 315 0.98

4 12 0.93 76 4.7 2.4 2 19 546 563 546 563 0.97

5 12 0.025 2 9.6 0.0 1 23 705 727 705 727 0.97

6 12 1.5e-05 0.0012 19.8 1.2 1 23 737 759 737 759 0.99

7 12 0.0011 0.087 13.9 2.0 1 23 765 788 765 788 0.97

8 12 0.0038 0.31 12.2 2.0 1 23 1143 1166 1143 1166 0.95

9 12 0.00023 0.019 16.0 1.0 3 23 1506 1526 1504 1526 0.97

10 12 0.19 15 6.9 6.3 1 23 1532 1555 1532 1555 0.97

11 12 0.11 8.8 7.6 1.1 3 23 1733 1753 1732 1753 0.91

12 12 0.0023 0.18 12.9 5.7 1 23 1759 1781 1759 1781 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.025	2	9.6	1.7	1	21	233	253	233	255	0.95
2	12	0.00043	0.035	15.2	0.2	1	23	265	287	265	287	0.98
3	12	3e-05	0.0024	18.8	7.5	1	23	293	315	293	315	0.98
4	12	0.93	76	4.7	2.4	2	19	546	563	546	563	0.97
5	12	0.025	2	9.6	0.0	1	23	705	727	705	727	0.97
6	12	1.5e-05	0.0012	19.8	1.2	1	23	737	759	737	759	0.99
7	12	0.0011	0.087	13.9	2.0	1	23	765	788	765	788	0.97
8	12	0.0038	0.31	12.2	2.0	1	23	1143	1166	1143	1166	0.95
9	12	0.00023	0.019	16.0	1.0	3	23	1506	1526	1504	1526	0.97
10	12	0.19	15	6.9	6.3	1	23	1532	1555	1532	1555	0.97
11	12	0.11	8.8	7.6	1.1	3	23	1733	1753	1732	1753	0.91
12	12	0.0023	0.18	12.9	5.7	1	23	1759	1781	1759	1781	0.99

Sequence Information

Coding Sequence: ATGATCGTCACCACAGTTGTCCAACAAACTGCGCAAAACAGTTCCAAAACTCAATCTAGATCCGAAACACCGATAAAAGTGGAAAGAAGGGGATCATCCTCCTCATACTCTTCGTTGGAAGATTTGGAACGAAATGGGAAAAACTTAAATGCAGTTACTTCTACACCGGTAGTGACATGTGATGCTACAATATCGTGTGCAGACAGTGCTTTAACGAGTGAAAGTCTACGTTCCAATCAGAAATCTGATACGGAAGCTCAACAGCAACAGCGTGTTCAGGAATCAGACGAGGCTAATGACTACGATGAGGATGAATCAGCCGATGAGAAATCTTCGCAGCCACGTCAGCAATTACACAATAAACGCCGCCTAAGTGGTCGCAGTTTCATAGACAAAACTACCAGTGTTTTGTTAGAGTATAATGCCGATAATCCTAATTCGTTGCGTAAAAAATTTCGCTTCAATCGCTATGCATTGAGTAATGGCGATGAGTCGGGCTTCGTTGATGCCAGTAACAGTAGCCAAATAATAAACACATCGACTCCTATCTCAACAGCTTTAAATATTACTGGAACGAATCAACCGAATTCAAATAATGTCACAAAATCTAACAGTTCTTCGGAAACCTCATCGCCGCCTCAAAGTAATGGTAATTCTAGTCCTGAATCAGGTATCGGAGAACGCGAGGATATGAAATATATGTGCCCCATTTGTGATGCGGTCTCACAAACCGCCCATCAGTTCACAAATCACATACGCTGTCACAATTACGCCTCCGGACATACCGAGAACTTTACCTGCCGTATTTGTTCTAAGGTGCTTTCATCAGCCTCATCGTTGGATCGTCATGTTCTAGTGCATACGGGGGAGCGGCCATTCAATTGTAAATATTGTCATCTTACATTTACCACAAATGGAAATATGCATCGTCATATGCGTACCCATAAGCAGCATCAGCATACTCATCATCGACGTAACTCGAATGGAACAAAGTTCAACCCAAATAACAACAGCAGCAATAACAATTATAATTGTAGTACAGCAACGACATCACCAGTTGTTAGTAACTCAACAGCATTAAGCAATGGACAATTAAATGAAGGCGTTAAATTATCACCAACAACAACTAAAACGCCAAACACAGCAACAGCAACAACAACAAATACAACGACAGCTTCAACCAACGCTTCAGACAATGATTGTAATCAAAATTCAACCAGTGCTAATAGCAAACGTTTAAATGGAAACATAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCGGATTCGTCAGCAGGTCATGTTTATAGCAAATTTAACAACAATAATAATGACAACCCCAAAAATAATAACAACAATGATTTAAAAATTAACAATAATAACTATAAACGCAAACACAGTGATGATCACCAAATACTGCAAGATGTAGTAGATTCTCGTGATTTCCTGAAGCAACCTTTAAGACAAGATACTAACCTTAACTTTCCCTCCCGCTCTCCTAGTACCACTAACGATGAAAAGCTTAACATAAGAACCAGTGAATCGGTAGTATGTCCCGTTTGTAATGAATCTGATTTTACGGACAATCAAGCTCTTGATTTTCATTTGGACACAAAACATACGGAAATACCAGCTAAATGCAAGAATTGTGATGTGTTATTCCGTACACATCATCAGCTTAGCATACATCCTTGCTCAGGTGACATACGGGGTTCTGTTAATTTATCCGTCAAACAAAGACGTTTGAGTGAAAGTTGCAACCAGAGTGCTGGTAAATATCAAGAGGAGTCGGAAGAACAGCTAAGACAAAGACATGATATATTCCAACATTTTAAAAATGTTATGGCTCAAAGTAATTCCCCTTCATCGCATTTCAATCAAGATTTGACAGAAGATGACATTAAATCAGAACCATCTGCTCACGACTCGAAAGATCTGGCTGATATTCAATCAATTTTAAATATGACCGCTTCGTCGAGTAATTCGAATTTACTCAGGAACTTTGAGCAGTCGGTAAATACACCTTCATCACAATACAGTTATGACAGGGATGAGGAAGAAGCTCAAGACGCCTTTACTTCGGAATTTCGTAAAATGAAGCTACGTGGTGAATTTCCCTGTAAGTTATGTCCGGCAGTATATCCCAATCTTCGAGCTCTCAAGGGTCACAATCGCGTGCATTTGAGTGAGGCTGGTCCGGCGGGTCCCTTCCGTTGCAACATGTGTCCCTACTCGATATGCGATAAGGCCGCTTTGATACGTCATATGCGTACGCATAATGGGGATCGTCCATATGAGTGTGCAGTTTGTAATTATGCCTTTACCACTAAAGCCAATTGTGAAAGACATTTACGTAATCGCCATGCTAAGACTACGCGTGATGAAGTTAAACGTGCCATTATATATCATCCTTCAGAAGATTCCTCTTGTGATGACACCAGCAAGAAGTTGCATATGTTTTCAAACGATTTGGAAGATGATTGTGAACTAATGTCCTATCATCAACACCATCCCAAAGATCGTTCCACTCCAGTGTCTCATCTGAAGGAAAGGTTGACAGCAGGCGATAGCCCTTCTACGAAACCCGTTAAGATTCAGGTTAAAAATCTAGAAGATCTCTTAGATAAATCGACAGTTTCATCGGGGTATCAGGATAGCTGTGATAAACGCAACATTGATATATCGCAAACACCAATTGACATGAGTATGGATGTTTTGGATTTAAGCAAGAAACCATCAGCACCTCAGCCTAAACTACAAGAAGAAAAGATAGAATCTTCCATACCTTTGATAACGCTACCTAAATCTAATGTCGCTAACTCAAATGAACTTTTAAATACGAAACTAATACCGTCGGAAGTTGATCCCAAGTTGGATGTATCTGCATTGGACAAACAGCACCAACAATTACTTTTGGCACAGCAGCAATTACTCAGTGATCCTAACCAACTAATGCAGCAACTTTATCGAAATCTTTTATTTCCTCAATTTCCACCCTTTTTTATGCCTAACACTTTTATGAACACAAATTTTGCAGAGTTTCAAAAACTCGCTCCTCTTCTAACACGTATGATGGGTGGTATGGCAACTGCAGCAGTAGCAACACTGCCGAATAATGATATTGAAAAGCCAGCTACTATGGCACCTATCAACTCCAACAACTTGCCTAGCTTGCCACAAATAAGTCCATTAATGTCTGAAAAATCTAACTCTGCGTCGATAAATTCAATATCATCACCCAAAAGTCTACTCTCGCCAAATCCTAACCATTTGTCTATGCCTAGACATATTCTGCCCGCTACTGCACAATCTCATCCCCCTAATTTACCGCCAACAATGCTCTCAAATGGTCCTGTCAAAATGGTGCTAAAAAACGGGGTTTTTATGCCTAAACAAAAGCAAAGACGCTATCGAACTGAACGCCCTTTTGCCTGTGAACATTGTTCTGCTCGTTTTACCCTACGCTCTAACATGGAACGACATGTTAAACAACAGCATCCTCAGTACTATGCCCAGCGTCAACGCAGTGGTCATCATGTTATGCGTGGTCGTGGAGCAAGCAGTGCCGGTAATATGAATAGCATCTCACATTTACAAGCTGCAGTATCGCAGGCTCACTATGGCTCTACACCTCCCTCGATGTCCTCTCATTCACCCATTTCCGATCAAGTCAAATGTGCCATATTGGCACAACAACTTAAAGCACGCAAAGACACTGATCTTCTACAACAAGCCTTGTCCCATGGTTCCAACAGTATGCCCAACTCAAATATGTTCTCCCAAGCAGGAGCCAATTTTAGTAATGGGCACACATCTTTTTTTGGTTTTAATCCCCATTCAAGTCATCAGCTTGGTACACCTAATGGTTCTATGGAAGATGATGAACCAAAATTAATTATTGATGAAGATGATGAAGAGGATGATGAAGAAGAAGATGTAGAAGAAGACGTAGAAGAAATTCTAGATGATAATGAAGACGATGAGGAGCGTGAATTGCTAGTCAACGAAAGCGTCGATAAGATCGAATCAAATCAACTACCCATTACTGTTGCAGAAGTTAAGCCCAAAGCAGAAAAGGCTCCAGAAACAGCAAAGAAAGTGGCTGAATCTATACTGGAACAAGCTATTAAAGCTGGGCAAAATATAAGCCCTTTTTCCAAAACGTCAAGTTCTTCTACTATCAATTCTAATAATTCCAATACCATGAAAACAATGATTGCTCAAGCACCAGCAGTAGGTAAATTTCTTAAAGAAGTGGCCAGTTCTTCTTTTAAAGATGAATCTCAGGACTTGGTTTCGGTGTCTGAGTTGGTTGATAATGCCACCAACAATGCCGTATCGTTTAACAATTACTTTCGTCCTTCAGATGTGGCCAACCAAATGGAGCCCAGCGATGAGGATGGCTTAGTGGCCTCTTCGGCCAGTGAAAGCAATAATTCGGGCGCCGAAGATACTATAAGTACGGAAAAACCTAAGAAAAAATCAGCCTACAGCTTAGCCCCTAATCGCGTACATTGCCCCTACTGTCAACGCATGTTCCCCTGGTCCAGTTCCTTAAGAAGACATATTCTTACCCATACCGGTCAAAAACCATTTAAATGTTCACATTGTCCTCTTTTATTTACCACCAAAAGCAACTGTGATCGCCATCTTTTGAGAAAACATGGAGATGTAGAGTCGGCTGTCTCAGTGTATGTTCCCACTGAAGATGTTAACGAGCCTATACCTTTGCCTAAGTCCGTCGAAGAAATTGAAAGAATGCAAAAAGAACGCGATGAGGAGTTACGAAAACGTAAGGCCGAAGAACAAAGAGAACGTTTGGAGAAAGAGCAACTGGAAAAACAAAAAATGGAACAGGAACAGCAACAAAAGCAAGCATTCCTTAAGCATTTAGCTGTCGCACAATTTCAACAACAATTCAACCAAAAAATTGAAGCATCTAATCCAGTTTCCTCATCAGAACTTCCGTTTAAGTGTCATTTGTGCGAAAGTTCCTTTGCTGAACGTCTGCAGTGTTTAGAGCACATTAAATCATTGCATTCCCATGAGTTTGCTCTCCTTCTTTCGAAAGGCGCTATTGAAAATGAGACTGACTCGGCCCAAATAACTACAAACGAGGAGGAGGAACGTCAACGATCTATCGAAGACACTGGCAAAAGCGGCAAATATCCCGATTACAGCAACCGTAAAGTCATTTGTGCCTTTTGTATGAGACGGTTCTGGTCAACTGAAGATCTACGGCGACATATGCGAACACATTCCGGCGAAAGACCTTTTCAATGTGAAGTTTGTTTCAGAAAATTCACCTTAAAACACAGTATGCTTAGACATATGAAGAAGCACAATGGTCTCCACGTTAACGGTTCTCAAACGAACAATGACAATTTGGCTAATGGTAATTCCGGCTCCGATTATTCCGACGATGAACAAAGCCCAAATTCATTGACCAACCCTGTCATGCCTGCATTACCAGGAAACAGTATTAATGCTTTATTAATGGGTTCAAAATTCCAAGAACTATTATGCAAGGCCAACGAGTGGCGTAATGGAAGTTTAAATGCATTACGGGAGGGTAAAGAAAACAATGCTGAGGAGCAAAATACCCCCCAATCTTCAGATTTAATTGGTAACTTGCTGGGAATAAGTGATCAGGGTATATTAAACAAGTTAATGTCGTCACCAGATGAAGCAGCCAAATTTTTAGGTGTAGAAAAATAA
Protein Sequence: MIVTTVVQQTAQNSSKTQSRSETPIKVERRGSSSSYSSLEDLERNGKNLNAVTSTPVVTCDATISCADSALTSESLRSNQKSDTEAQQQQRVQESDEANDYDEDESADEKSSQPRQQLHNKRRLSGRSFIDKTTSVLLEYNADNPNSLRKKFRFNRYALSNGDESGFVDASNSSQIINTSTPISTALNITGTNQPNSNNVTKSNSSSETSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNPNNNSSNNNYNCSTATTSPVVSNSTALSNGQLNEGVKLSPTTTKTPNTATATTTNTTTASTNASDNDCNQNSTSANSKRLNGNIESYESDGGCSSDSSAGHVYSKFNNNNNDNPKNNNNNDLKINNNNYKRKHSDDHQILQDVVDSRDFLKQPLRQDTNLNFPSRSPSTTNDEKLNIRTSESVVCPVCNESDFTDNQALDFHLDTKHTEIPAKCKNCDVLFRTHHQLSIHPCSGDIRGSVNLSVKQRRLSESCNQSAGKYQEESEEQLRQRHDIFQHFKNVMAQSNSPSSHFNQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDTSKKLHMFSNDLEDDCELMSYHQHHPKDRSTPVSHLKERLTAGDSPSTKPVKIQVKNLEDLLDKSTVSSGYQDSCDKRNIDISQTPIDMSMDVLDLSKKPSAPQPKLQEEKIESSIPLITLPKSNVANSNELLNTKLIPSEVDPKLDVSALDKQHQQLLLAQQQLLSDPNQLMQQLYRNLLFPQFPPFFMPNTFMNTNFAEFQKLAPLLTRMMGGMATAAVATLPNNDIEKPATMAPINSNNLPSLPQISPLMSEKSNSASINSISSPKSLLSPNPNHLSMPRHILPATAQSHPPNLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASSAGNMNSISHLQAAVSQAHYGSTPPSMSSHSPISDQVKCAILAQQLKARKDTDLLQQALSHGSNSMPNSNMFSQAGANFSNGHTSFFGFNPHSSHQLGTPNGSMEDDEPKLIIDEDDEEDDEEEDVEEDVEEILDDNEDDEERELLVNESVDKIESNQLPITVAEVKPKAEKAPETAKKVAESILEQAIKAGQNISPFSKTSSSSTINSNNSNTMKTMIAQAPAVGKFLKEVASSSFKDESQDLVSVSELVDNATNNAVSFNNYFRPSDVANQMEPSDEDGLVASSASESNNSGAEDTISTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPLPKSVEEIERMQKERDEELRKRKAEEQRERLEKEQLEKQKMEQEQQQKQAFLKHLAVAQFQQQFNQKIEASNPVSSSELPFKCHLCESSFAERLQCLEHIKSLHSHEFALLLSKGAIENETDSAQITTNEEEERQRSIEDTGKSGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEVCFRKFTLKHSMLRHMKKHNGLHVNGSQTNNDNLANGNSGSDYSDDEQSPNSLTNPVMPALPGNSINALLMGSKFQELLCKANEWRNGSLNALREGKENNAEEQNTPQSSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975888;
90% Identity: iTF_01201933;
80% Identity: iTF_01201933;