Basic Information

Insect: Phyto melanocephala
Gene Symbol: RREB1
Assembly: GCA_941918875.1
Location: CALNXE010004885.1:22512-28348[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.025 2 9.6 1.7 1 21 205 225 205 227 0.95

2 12 0.00042 0.034 15.2 0.2 1 23 237 259 237 259 0.98

3 12 3e-05 0.0024 18.8 7.5 1 23 265 287 265 287 0.98

4 12 0.91 74 4.7 2.4 2 19 518 535 518 535 0.97

5 12 0.025 2 9.6 0.0 1 23 677 699 677 699 0.97

6 12 1.4e-05 0.0012 19.8 1.2 1 23 709 731 709 731 0.99

7 12 0.001 0.085 14.0 2.0 1 23 737 760 737 760 0.97

8 12 0.0037 0.31 12.2 2.0 1 23 1115 1138 1115 1138 0.95

9 12 0.00023 0.019 16.0 1.0 3 23 1478 1498 1476 1498 0.97

10 12 0.18 15 6.9 6.3 1 23 1504 1527 1504 1527 0.97

11 12 0.11 8.7 7.6 1.1 3 23 1705 1725 1704 1725 0.91

12 12 0.0022 0.18 12.9 5.7 1 23 1731 1753 1731 1753 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.025	2	9.6	1.7	1	21	205	225	205	227	0.95
2	12	0.00042	0.034	15.2	0.2	1	23	237	259	237	259	0.98
3	12	3e-05	0.0024	18.8	7.5	1	23	265	287	265	287	0.98
4	12	0.91	74	4.7	2.4	2	19	518	535	518	535	0.97
5	12	0.025	2	9.6	0.0	1	23	677	699	677	699	0.97
6	12	1.4e-05	0.0012	19.8	1.2	1	23	709	731	709	731	0.99
7	12	0.001	0.085	14.0	2.0	1	23	737	760	737	760	0.97
8	12	0.0037	0.31	12.2	2.0	1	23	1115	1138	1115	1138	0.95
9	12	0.00023	0.019	16.0	1.0	3	23	1478	1498	1476	1498	0.97
10	12	0.18	15	6.9	6.3	1	23	1504	1527	1504	1527	0.97
11	12	0.11	8.7	7.6	1.1	3	23	1705	1725	1704	1725	0.91
12	12	0.0022	0.18	12.9	5.7	1	23	1731	1753	1731	1753	0.99

Sequence Information

Coding Sequence: AGAAGGGGATCATCCTCCTCATACTCTTCGTTGGAAGATTTGGAACGAAATGGGAAAAACTTAAATGCAGTTACTTCTACACCGGTAGTGACATGTGATGCTACAATATCGTGTGCAGACAGTGCTTTAACGAGTGAAAGTCTACGTTCCAATCAGAAATCTGATACGGAAGCTCAACAGCAACAGCGTGTTCAGGAATCAGACGAGGCTAATGACTACGATGAGGATGAATCAGCCGATGAGAAATCTTCGCAGCCACGTCAGCAATTACACAATAAACGCCGCCTAAGTGGTCGCAGTTTCATAGACAAAACTACCAGTGTTTTGTTAGAGTATAATGCCGATAATCCTAATTCGTTGCGTAAAAAATTTCGCTTCAATCGCTATGCATTGAGTAATGGCGATGAGTCGGGCTTCGTTGATGCCAGTAACAGTAGCCAAATAATAAACACATCGACTCCTATCTCAACAGCTTTAAATATTACTGGAACGAATCAACCGAATTCAAATAATGTCACAAAATCTAACAGTTCTTCGGAAACCTCATCGCCGCCTCAAAGTAATGGTAATTCTAGTCCTGAATCAGGTATCGGAGAACGCGAGGATATGAAATATATGTGCCCCATTTGTGATGCGGTCTCACAAACCGCCCATCAGTTCACAAATCACATACGCTGTCACAATTACGCCTCCGGACATACCGAGAACTTTACCTGCCGTATTTGTTCTAAGGTGCTTTCATCAGCCTCATCGTTGGATCGTCATGTTCTAGTGCATACGGGGGAGCGGCCATTCAATTGTAAATATTGTCATCTTACATTTACCACAAATGGAAATATGCATCGTCATATGCGTACCCATAAGCAGCATCAGCATACTCATCATCGACGTAACTCGAATGGAACAAAGTTCAACCCAAATAACAACAGCAGCAATAACAATTATAATTGTAGTACAGCAACGACATCACCAGTTGTTAGTAACTCAACAGCATTAAGCAATGGACAATTAAATGAAGGCGTTAAATTATCACCAACAACAACTAAAACGCCAAACACAGCAACAGCAACAACAACAAATACAACGACAGCTTCAACCAACGCTTCAGACAATGATTGTAATCAAAATTCAACCAGTGCTAATAGCAAACGTTTAAATGGAAACATAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCGGATTCGTCAGCAGGTCATGTTTATAGCAAATTTAACAACAATAATAATGACAACCCCAAAAATAATAACAACAATGATTTAAAAATTAACAATAATAACTATAAACGCAAACACAGTGATGATCACCAAATACTGCAAGATGTAGTAGATTCTCGTGATTTCCTGAAGCAACCTTTAAGACAAGATACTAACCTTAACTTTCCCTCCCGCTCTCCTAGTACCACTAACGATGAAAAGCTTAACATAAGAACCAGTGAATCGGTAGTATGTCCCGTTTGTAATGAATCTGATTTTACGGACAATCAAGCTCTTGATTTTCATTTGGACACAAAACATACGGAAATACCAGCTAAATGCAAGAATTGTGATGTGTTATTCCGTACACATCATCAGCTTAGCATACATCCTTGCTCAGGTGACATACGGGGTTCTGTTAATTTATCCGTCAAACAAAGACGTTTGAGTGAAAGTTGCAACCAGAGTGCTGGTAAATATCAAGAGGAGTCGGAAGAACAGCTAAGACAAAGACATGATATATTCCAACATTTTAAAAATGTTATGGCTCAAAGTAATTCCCCTTCATCGCATTTCAATCAAGATTTGACAGAAGATGACATTAAATCAGAACCATCTGCTCACGACTCGAAAGATCTGGCTGATATTCAATCAATTTTAAATATGACCGCTTCGTCGAGTAATTCGAATTTACTCAGGAACTTTGAGCAGTCGGTAAATACACCTTCATCACAATACAGTTATGACAGGGATGAGGAAGAAGCTCAAGACGCCTTTACTTCGGAATTTCGTAAAATGAAGCTACGTGGTGAATTTCCCTGTAAGTTATGTCCGGCAGTATATCCCAATCTTCGAGCTCTCAAGGGTCACAATCGCGTGCATTTGAGTGAGGCTGGTCCGGCGGGTCCCTTCCGTTGCAACATGTGTCCCTACTCGATATGCGATAAGGCCGCTTTGATACGTCATATGCGTACGCATAATGGGGATCGTCCATATGAGTGTGCAGTTTGTAATTATGCCTTTACCACTAAAGCCAATTGTGAAAGACATTTACGTAATCGCCATGCTAAGACTACGCGTGATGAAGTTAAACGTGCCATTATATATCATCCTTCAGAAGATTCCTCTTGTGATGACACCAGCAAGAAGTTGCATATGTTTTCAAACGATTTGGAAGATGATTGTGAACTAATGTCCTATCATCAACACCATCCCAAAGATCGTTCCACTCCAGTGTCTCATCTGAAGGAAAGGTTGACAGCAGGCGATAGCCCTTCTACGAAACCCGTTAAGATTCAGGTTAAAAATCTAGAAGATCTCTTAGATAAATCGACAGTTTCATCGGGGTATCAGGATAGCTGTGATAAACGCAACATTGATATATCGCAAACACCAATTGACATGAGTATGGATGTTTTGGATTTAAGCAAGAAACCATCAGCACCTCAGCCTAAACTACAAGAAGAAAAGATAGAATCTTCCATACCTTTGATAACGCTACCTAAATCTAATGTCGCTAACTCAAATGAACTTTTAAATACGAAACTAATACCGTCGGAAGTTGATCCCAAGTTGGATGTATCTGCATTGGACAAACAGCACCAACAATTACTTTTGGCACAGCAGCAATTACTCAGTGATCCTAACCAACTAATGCAGCAACTTTATCGAAATCTTTTATTTCCTCAATTTCCACCCTTTTTTATGCCTAACACTTTTATGAACACAAATTTTGCAGAGTTTCAAAAACTCGCTCCTCTTCTAACACGTATGATGGGTGGTATGGCAACTGCAGCAGTAGCAACACTGCCGAATAATGATATTGAAAAGCCAGCTACTATGGCACCTATCAACTCCAACAACTTGCCTAGCTTGCCACAAATAAGTCCATTAATGTCTGAAAAATCTAACTCTGCGTCGATAAATTCAATATCATCACCCAAAAGTCTACTCTCGCCAAATCCTAACCATTTGTCTATGCCTAGACATATTCTGCCCGCTACTGCACAATCTCATCCCCCTAATTTACCGCCAACAATGCTCTCAAATGGTCCTGTCAAAATGGTGCTAAAAAACGGGGTTTTTATGCCTAAACAAAAGCAAAGACGCTATCGAACTGAACGCCCTTTTGCCTGTGAACATTGTTCTGCTCGTTTTACCCTACGCTCTAACATGGAACGACATGTTAAACAACAGCATCCTCAGTACTATGCCCAGCGTCAACGCAGTGGTCATCATGTTATGCGTGGTCGTGGAGCAAGCAGTGCCGGTAATATGAATAGCATCTCACATTTACAAGCTGCAGTATCGCAGGCTCACTATGGCTCTACACCTCCCTCGATGTCCTCTCATTCACCCATTTCCGATCAAGTCAAATGTGCCATATTGGCACAACAACTTAAAGCACGCAAAGACACTGATCTTCTACAACAAGCCTTGTCCCATGGTTCCAACAGTATGCCCAACTCAAATATGTTCTCCCAAGCAGGAGCCAATTTTAGTAATGGGCACACATCTTTTTTTGGTTTTAATCCCCATTCAAGTCATCAGCTTGGTACACCTAATGGTTCTATGGAAGATGATGAACCAAAATTAATTATTGATGAAGATGATGAAGAGGATGATGAAGAAGAAGATGTAGAAGAAGACGTAGAAGAAATTCTAGATGATAATGAAGACGATGAGGAGCGTGAATTGCTAGTCAACGAAAGCGTCGATAAGATCGAATCAAATCAACTACCCATTACTGTTGCAGAAGTTAAGCCCAAAGCAGAAAAGGCTCCAGAAACAGCAAAGAAAGTGGCTGAATCTATACTGGAACAAGCTATTAAAGCTGGGCAAAATATAAGCCCTTTTTCCAAAACGTCAAGTTCTTCTACTATCAATTCTAATAATTCCAATACCATGAAAACAATGATTGCTCAAGCACCAGCAGTAGGTAAATTTCTTAAAGAAGTGGCCAGTTCTTCTTTTAAAGATGAATCTCAGGACTTGGTTTCGGTGTCTGAGTTGGTTGATAATGCCACCAACAATGCCGTATCGTTTAACAATTACTTTCGTCCTTCAGATGTGGCCAACCAAATGGAGCCCAGCGATGAGGATGGCTTAGTGGCCTCTTCGGCCAGTGAAAGCAATAATTCGGGCGCCGAAGATACTATAAGTACGGAAAAACCTAAGAAAAAATCAGCCTACAGCTTAGCCCCTAATCGCGTACATTGCCCCTACTGTCAACGCATGTTCCCCTGGTCCAGTTCCTTAAGAAGACATATTCTTACCCATACCGGTCAAAAACCATTTAAATGTTCACATTGTCCTCTTTTATTTACCACCAAAAGCAACTGTGATCGCCATCTTTTGAGAAAACATGGAGATGTAGAGTCGGCTGTCTCAGTGTATGTTCCCACTGAAGATGTTAACGAGCCTATACCTTTGCCTAAGTCCGTCGAAGAAATTGAAAGAATGCAAAAAGAACGCGATGAGGAGTTACGAAAACGTAAGGCCGAAGAACAAAGAGAACGTTTGGAGAAAGAGCAACTGGAAAAACAAAAAATGGAACAGGAACAGCAACAAAAGCAAGCATTCCTTAAGCATTTAGCTGTCGCACAATTTCAACAACAATTCAACCAAAAAATTGAAGCATCTAATCCAGTTTCCTCATCAGAACTTCCGTTTAAGTGTCATTTGTGCGAAAGTTCCTTTGCTGAACGTCTGCAGTGTTTAGAGCACATTAAATCATTGCATTCCCATGAGTTTGCTCTCCTTCTTTCGAAAGGCGCTATTGAAAATGAGACTGACTCGGCCCAAATAACTACAAACGAGGAGGAGGAACGTCAACGATCTATCGAAGACACTGGCAAAAGCGGCAAATATCCCGATTACAGCAACCGTAAAGTCATTTGTGCCTTTTGTATGAGACGGTTCTGGTCAACTGAAGATCTACGGCGACATATGCGAACACATTCCGGCGAAAGACCTTTTCAATGTGAAGTTTGTTTCAGAAAATTCACCTTAAAACACAGTATGCTTAGACATATGAAGAAGCACAATGGTCTCCACGTTAACGGTTCTCAAACGAACAATGACAATTTGGCTAATGGTAATTCCGGCTCCGATTATTCCGACGATGAACAAAGCCCAAATTCATTGACCAACCCTGTCATGCCTGCATTACCAGGAAACAGTATTAATGCTTTATTAATGGGTTCAAAATTCCAAGAACTATTATGCAAGGCCAACGAGTGGCGTAATGGAAGTTTAAATGCATTACGGGAGGGTAAAGAAAACAATGCTGAGGAGCAAAATACCCCCCAATCTTCAGATTTAATTGGTAACTTGCTGGGAATAAGTGATCAGGGTATATTAAACAAGTTAATGTCGTCACCAGATGAAGCAGCCAAATTTTTAGGTGTAGAAAAATAA
Protein Sequence: RRGSSSSYSSLEDLERNGKNLNAVTSTPVVTCDATISCADSALTSESLRSNQKSDTEAQQQQRVQESDEANDYDEDESADEKSSQPRQQLHNKRRLSGRSFIDKTTSVLLEYNADNPNSLRKKFRFNRYALSNGDESGFVDASNSSQIINTSTPISTALNITGTNQPNSNNVTKSNSSSETSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNPNNNSSNNNYNCSTATTSPVVSNSTALSNGQLNEGVKLSPTTTKTPNTATATTTNTTTASTNASDNDCNQNSTSANSKRLNGNIESYESDGGCSSDSSAGHVYSKFNNNNNDNPKNNNNNDLKINNNNYKRKHSDDHQILQDVVDSRDFLKQPLRQDTNLNFPSRSPSTTNDEKLNIRTSESVVCPVCNESDFTDNQALDFHLDTKHTEIPAKCKNCDVLFRTHHQLSIHPCSGDIRGSVNLSVKQRRLSESCNQSAGKYQEESEEQLRQRHDIFQHFKNVMAQSNSPSSHFNQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDTSKKLHMFSNDLEDDCELMSYHQHHPKDRSTPVSHLKERLTAGDSPSTKPVKIQVKNLEDLLDKSTVSSGYQDSCDKRNIDISQTPIDMSMDVLDLSKKPSAPQPKLQEEKIESSIPLITLPKSNVANSNELLNTKLIPSEVDPKLDVSALDKQHQQLLLAQQQLLSDPNQLMQQLYRNLLFPQFPPFFMPNTFMNTNFAEFQKLAPLLTRMMGGMATAAVATLPNNDIEKPATMAPINSNNLPSLPQISPLMSEKSNSASINSISSPKSLLSPNPNHLSMPRHILPATAQSHPPNLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHHVMRGRGASSAGNMNSISHLQAAVSQAHYGSTPPSMSSHSPISDQVKCAILAQQLKARKDTDLLQQALSHGSNSMPNSNMFSQAGANFSNGHTSFFGFNPHSSHQLGTPNGSMEDDEPKLIIDEDDEEDDEEEDVEEDVEEILDDNEDDEERELLVNESVDKIESNQLPITVAEVKPKAEKAPETAKKVAESILEQAIKAGQNISPFSKTSSSSTINSNNSNTMKTMIAQAPAVGKFLKEVASSSFKDESQDLVSVSELVDNATNNAVSFNNYFRPSDVANQMEPSDEDGLVASSASESNNSGAEDTISTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPLPKSVEEIERMQKERDEELRKRKAEEQRERLEKEQLEKQKMEQEQQQKQAFLKHLAVAQFQQQFNQKIEASNPVSSSELPFKCHLCESSFAERLQCLEHIKSLHSHEFALLLSKGAIENETDSAQITTNEEEERQRSIEDTGKSGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEVCFRKFTLKHSMLRHMKKHNGLHVNGSQTNNDNLANGNSGSDYSDDEQSPNSLTNPVMPALPGNSINALLMGSKFQELLCKANEWRNGSLNALREGKENNAEEQNTPQSSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975888;
90% Identity: iTF_01201934;
80% Identity: iTF_01201934;