Mror021499.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanophora roralis
Gene Symbol
RREB1
Assembly
GCA_963583895.1
Location
OY757190.1:21672359-21680430[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.025 2.7 9.6 1.7 1 21 233 253 233 255 0.95
2 14 0.00043 0.047 15.2 0.2 1 23 265 287 265 287 0.98
3 14 3e-05 0.0033 18.8 7.5 1 23 293 315 293 315 0.98
4 14 0.32 35 6.1 0.6 2 23 520 543 519 543 0.90
5 14 0.93 1e+02 4.7 2.4 2 19 549 566 549 566 0.97
6 14 0.025 2.7 9.6 0.0 1 23 708 730 708 730 0.97
7 14 1.5e-05 0.0016 19.8 1.2 1 23 740 762 740 762 0.99
8 14 0.0011 0.12 13.9 2.0 1 23 768 791 768 791 0.97
9 14 0.0038 0.42 12.2 2.0 1 23 1152 1175 1152 1175 0.95
10 14 0.00023 0.025 16.0 1.0 3 23 1501 1521 1499 1521 0.97
11 14 0.19 20 6.9 6.3 1 23 1527 1550 1527 1550 0.97
12 14 0.9 98 4.7 3.7 1 23 1656 1679 1656 1679 0.97
13 14 0.11 12 7.6 1.1 3 23 1732 1752 1731 1752 0.91
14 14 0.0013 0.14 13.7 5.7 1 23 1758 1780 1758 1780 0.99

Sequence Information

Coding Sequence
ATGATAGTCACGGCAACTGTCCAACAAACTACCCAAAACAGCACCAAAACTCAGACCAGACCTCAAACACCAATTAAGATGGAAAGAAGAGAATCTTCCTCTTCGTATTCTTCGTTAGAAGAATTGGAGCGCAAtggaaaaaacttaaatgcagTAACCTCTACGCCGGTTGTGGCAAGTGATGCAACAGTTTCGTGCGCTGACAGTGCTTTAACGAGTGCAAGTATGCATTCAAATCAAAAGTCAGATACTGAAGATCATCCGCAGCCGCGTATGCAGGAATCCGACGAAGCTAATGACTACGATGAAGATGAATCAGCCGATGAAAAATCTTCACAGCCACGTCAGCATTTGAATTATAAACGCCGTTTAGGCGGTCGCAGTTTtgcagaaaaaacaacaaacattttgttaGAATACAATGCCGATAATCCCAGCtctttacgcaaaaaatttcGCTTTAATCGCTGTGCTTTAGGCAATGGTGATGAATCAGGTTTTGTTGATACCAGCAACAATAGTCAgcttataaatacattttctgCCGCCTCAACAGCTTTAGCAGTTGCTGAAACGAATCGAGCAAATTCAAATAGTGGCACAAAGTCAAACAGTTCTTCGGATACCTCATCGCCGTCTCAAAGCAATGGCAATTCTAGTCCCGAATCAGGTATTGGAGAACGTGAAGATATGAAATATATGTGCCCTATCTGTGATGCTGTCTCACAAACCGCCCATCAGTTTACGAATCATATACGCTGTCATAATTACGCCTCTGGACATACAGAGAACTTTACGTGTCGTATTTGTTCtaagGTGCTTTCATCAGCCTCATCATTGGATCGTCATGTTCTGGTGCATACGGGAGAGCGAccatttaattgtaaatattgtcATCTCACATTTACTACAAATGGGAATATGCATCGTCATATGCGCACCCATAAGCAGCATCAGCATACTCATCATCGACGCAACTCAAATGGAACAAAGTTCAACTcgaacaacaacaaccacagcaataacaataataacagcACAACAACAGCGACTACATCCACAGCTGAAAGTAAAACAACAGCATTAGGCAATGGACAATTAAATGAAGGCGTTAAATTatcaccaacaacaacaacaacagcagctgACACAACAACGATAGTAACAACAAGACCAGCCAAAGCTCCAGACAATGACTGTAATCATAATTCAACAAGTGTTAATGGCAAATGTTTAAATGGCAACATAGAAAGTTATGAAAGCGATGGTGGTTGCTCATCAGATTTGTCGGCAAGCCATGTTTACAACAAAtgtaacaacaataatataaatGGAAAcccaaataacaataacaacaataataatgattttaaaattaataataataactatAAACGCAAACACAGTGATGATCAAAAAACAGCCGCCCCAAATCTTGTAAACTCTCATGAGCTTCTTAATCAAtcctttaaagttaataaaagccCCAACTATACCCCCTGCCTTCCTAAAAACCATAGCAATGAAATGCTAAACAGAATCACCAGTGAGTCGGTCGTTTGTCCTGTTTGCAATAAAACAGATTTTACGAATAATCAGGCCCTTGATCATCATTTAGACACAAAACATCCAGAAATACCGGCGAAATGTAAAAACTGCGATGTTTTGTTTCGCACTCATCATCAGCTCAGCATTCATCCCTGTTCCGGTGACATCAATAGTTCTGTTAATTTATCCATCAAACATAGACGTTTAAGCGAAAGTTCAAATCAACAGGTTGAGGAATATGGAGATGTTATGGAGGAGCAACATAAGCAGAAAAATGATAtttatcaacattttaaaaatgccaTTGCTCAGAATAATTCACCCTCAATCAATTTTAATCAAGATTTAACAGAGGATGAAGTCAAATCAGAACCATCAGCTCATGATTCCAAAGATTTGGCTGATATACAATCAATTCTAAATATGACCGCATCGTCAAGTAATTCAAATTTGCTTAGAAACTTTGAACAAGCAGTTAATACTCCTTCATCGCAATACAGTTATGATAGGGATGAGGAAGAAGCTCAAGATGCTTTTACCTCAGAGTTTCGCAAAATGAAGTTACGCGGCGAGTTTCCCTGTAAGTTATGTCCGGCTGTATATCCCAATCTCCGAGCGCTCAAGGGCCACAATCGTGTACATTTAAGTGAGGCTGGTCCGGCAGGACCCTTTCGTTGCAATATGTGTCCCTATTCGATATGCGATAAGGCTGCATTAATACGACATATGCGTACACATAACGGTGACCGTCCATATGAATGTGCCGTATGTAATTATGCCTTTACCACCAAGGCCAACTGTGAGAGACATTTACGAAATCGTCATGCTAAAACTACGCGTGAAGAAGTTAAACGTGCCATTATTTATCATCCTTCGGAAGATTCCTCCTGTGAGGATACTGCCAAGAAGTTGCATATGTTCTCGAACGATTTAGATGATGATTGTGATATTGTGTCCTATCAACACCATCAACCCAAGGATCGTTCCACACCAGTGTCTCATCTGAAGGAAAGACTGATTGCAGGAGACAGTCCTTCATCAAAGCCCGTTAAGATCCAGGTTAAAAGTCTGGAAGATCTCTTAGATAAATCAACGGCTTCATCAGGTTACCACGATAGCTGTGATAAGGGCATCATTGAAACTCCTCAAGCGCCAATAGACATGAGTATGGATGTTTTGGATTTGAGTAAGAAATCCACGGCACCTAAGCCATTTGTGCCGGAAGAAAAGGTAGAATCTTCCATACCTTTGATAACGCTACCCAAACCTGATGTTAATAactcaaatgaaattttaaatactaaattaaTACCAGCGGAAGTTGGTCCCAAAGTGGATGTATCTGCCTTAGAGAAGCAGCATCAACAAATACTTTTGGCTCAGCAGCAACTACTCAGTGATCCAAACCAGTTAATGCAACAACTATACCGAAATCTTTTATTTCCTCAATTTCCTCCGTTCTTTATGCCTAATGCCTTTATGAACACAAATTTTGCAGATTTTCAAAAACTCGCCCCTTTGTTAACACGAATGATGGGTGGTATGGCAACACCAACACCAGCACCAGCACCCGTCCCAGTCTCATTGCCAAACAATGATATTGACAAGCCAACTACTTTATCGGGCATTAACTCCGCCAGCTTGCCTAGCATGCCGCCAATAAATCCGATAATATCGGATAAGTCTAATTTAGCCCCTTTCAATACCGTGTCACCACCTAAAAGTTTATTGTCGCCAACCCCCAGCCATTTGTCTGTTCCTAGACATGTGTTGAACGCTAATCCACAAAATCGCTCTCCGAATTTGCCACCAACAATGCTTTCAAATGGTCCTGTCAAAATGGTGCTGAAAAATGGAGTTTTTATgcctaaacaaaaacaaagacgtTATCGCACAGAACGTCCCTTTGCCTGTGAACATTGCTCGGCTCGTTTTACTTTGCGATCTAATATGGAACGCCATGTTAAACAACAACATCCCCAGTACTATGCCCAGCGTCAACGTAGTGGTCATCAAATTATGCGTGGTCGTGGGTCCAGCAGTGCTGCTAATATAAATAGCATATCACATTTGCAAACAAGTGCAGTGCAGGCTCATTATGGCTCTACAAGTCCATCGATGCCATCTCATTCCCCCATTTCTGATCAGGTTAAATGTGCCATATTGGCACAACAACTTAAAGCACGCAAGGATACAGATCTCTTACAACAAGCTTTGGCCCATGGATCTAATTTTAGTAATGGACAAACACCCTATTTTGGCTTCAATTCCCATCCAAACCAACATATTAGCCAAAATGGTACACCTAATGGTTCAATGGAAGATGATGAACCCAAATTAATAATTGATGAAGACGAAGAAGAAGAGGAAGACGAAGAGGAGGACGTAGAAGAAATTATGGACGATAATGAAGAAGACGACGACCGTGAGTTGGTGGTAAACGAAGCCGACGACAAATTAGAATCATATCAACTACCCACCACTATTGCAGAGGTTGCACCTAGGCCAGAAAAAACGCCTGAAACAGCTAAAAAGGTAGCTGACTCTATACTGGAACACGCTATTAAAGCTGGTCAAAATATAAGCTCATTTTCGAAGACATCGAAACCTTCTAACATTAATTCTAACAACTCAAATACCATGAAAAAAATGATTGCTCAAGCGCCAGCGGTTGGAAAGTTTCTGAAAGACGTAGCAAGTTCATCTTTTAAAGATGAATCTCAGGATTTGGTTTCAGTATCTGAGTTGGTAGACAATGCTACCAGTAATGCAGTATCTTTCAACAGCTATTTCCGTCCTTCAGATGTGGCCAACCATATGGAGCCTAGCGACGAAGATGGCTTGGTGGCCTCTTCAGCCAGTGAAAGCAACAATTCGGGAGCCGAAGATACTATTAGTACAGATAAGCCAAAAAAGAAATCAGCTTACAGCTTAGCCCCTAATCGTGTACATTGCCCTTACTGTCAGCGCATGTTCCCTTGGTCTAGTTCCTTAAGAAGACACATTCTAACCCACACCGGTCAGAAGCCATTTAAATGTTCACATTGTCCTCTtttgtttacaaccaaaagcaATTGTGATCGCCATCTTTTGAGAAAACATGGGGATGTTGAGTCGGCCGTTTCAGTGTATGTTCCCACTGAGGATGTCAATGAACCTATACCTTTACCCAAATCCGTTGAAGAAATCGAAAGAATGCAGAGAGAACGTGAAGAAGAAGCTCGCAAACAAAAAGCTAAAGAACAAAGAGAACGTTTAGAGAAGGAGCAGCGGgaaaaggaaaaatttgaaCAGGAACAGCAgaagcaacagcaacaaaaacaagaatttcTTAAGCATTTGGCAGTTGCTCAATTTCAGCaacaattaaatcaaaaaccTGAACCAATTTGCCCAGTATCTTCTTCAGAGTTACCTTTTAAATGTCACTTATGCGAAAATTCCTTTGCAGATCGTTTGCAGTGTTTAGAGCACATAAAAACTTTACATTCTCAAGAGTTTGCTCTACTTCTTTCAAAAGGTGCTATTGAAAATGAAACAGACTCAACACAAATGGCTATTAATGAAGAAGATGAACGTCAACGATACAATGAAGAGGCTGGCAAGGGCGGCAAATATCCCGACTACAGCAACCGAAAAGTTATTTGTGCCTTTTGCATGAGACGCTTCTGGTCGACTGAAGATCTACGTCGACACATGCGTACCCATTCTGGCGAAAGACCTTTTCAATGCGAAATTTGTTTCAGAAAGTTCACCCTAAAACACAGCATGTTAAGGCACATGAAAAAACACAATGGCCTTCATACTAATGGCTCGCAAACGAGCAGTGACAATTTGACCAATGGTAATTCTGGCTCCGATTACTCCGACGATGAACAAAGTCCAAACTCATTGGCTAACCCTGTCATGCCTGCATTACCAGCAACCAGTATTAATGCTTTATTAATGGGTTCGAAATTCCAAGAGCTGCTATGTAAGGCCAATGAATGGCGTAATGGAAATTTAAATGCATTACGGGAGGGTAAAACAAATAATGCAGAGGAATCGGGCACTCCACAGTCCACGGATTTAATTGGTAACTTATTAGGAATTAGCGATCAAGGTATATTAAATAAGTTGATGTCATCACCAGATGAAGCAGCAAGATTTTTAggtgttgaaaaataa
Protein Sequence
MIVTATVQQTTQNSTKTQTRPQTPIKMERRESSSSYSSLEELERNGKNLNAVTSTPVVASDATVSCADSALTSASMHSNQKSDTEDHPQPRMQESDEANDYDEDESADEKSSQPRQHLNYKRRLGGRSFAEKTTNILLEYNADNPSSLRKKFRFNRCALGNGDESGFVDTSNNSQLINTFSAASTALAVAETNRANSNSGTKSNSSSDTSSPSQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNSNNNNHSNNNNNSTTTATTSTAESKTTALGNGQLNEGVKLSPTTTTTAADTTTIVTTRPAKAPDNDCNHNSTSVNGKCLNGNIESYESDGGCSSDLSASHVYNKCNNNNINGNPNNNNNNNNDFKINNNNYKRKHSDDQKTAAPNLVNSHELLNQSFKVNKSPNYTPCLPKNHSNEMLNRITSESVVCPVCNKTDFTNNQALDHHLDTKHPEIPAKCKNCDVLFRTHHQLSIHPCSGDINSSVNLSIKHRRLSESSNQQVEEYGDVMEEQHKQKNDIYQHFKNAIAQNNSPSINFNQDLTEDEVKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQAVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDTAKKLHMFSNDLDDDCDIVSYQHHQPKDRSTPVSHLKERLIAGDSPSSKPVKIQVKSLEDLLDKSTASSGYHDSCDKGIIETPQAPIDMSMDVLDLSKKSTAPKPFVPEEKVESSIPLITLPKPDVNNSNEILNTKLIPAEVGPKVDVSALEKQHQQILLAQQQLLSDPNQLMQQLYRNLLFPQFPPFFMPNAFMNTNFADFQKLAPLLTRMMGGMATPTPAPAPVPVSLPNNDIDKPTTLSGINSASLPSMPPINPIISDKSNLAPFNTVSPPKSLLSPTPSHLSVPRHVLNANPQNRSPNLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRQRSGHQIMRGRGSSSAANINSISHLQTSAVQAHYGSTSPSMPSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNFSNGQTPYFGFNSHPNQHISQNGTPNGSMEDDEPKLIIDEDEEEEEDEEEDVEEIMDDNEEDDDRELVVNEADDKLESYQLPTTIAEVAPRPEKTPETAKKVADSILEHAIKAGQNISSFSKTSKPSNINSNNSNTMKKMIAQAPAVGKFLKDVASSSFKDESQDLVSVSELVDNATSNAVSFNSYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTISTDKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPLPKSVEEIERMQREREEEARKQKAKEQRERLEKEQREKEKFEQEQQKQQQQKQEFLKHLAVAQFQQQLNQKPEPICPVSSSELPFKCHLCENSFADRLQCLEHIKTLHSQEFALLLSKGAIENETDSTQMAINEEDERQRYNEEAGKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLHTNGSQTSSDNLTNGNSGSDYSDDEQSPNSLANPVMPALPATSINALLMGSKFQELLCKANEWRNGNLNALREGKTNNAEESGTPQSTDLIGNLLGISDQGILNKLMSSPDEAARFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01162496; iTF_01201934; iTF_01201933;
90% Identity
-
80% Identity
-