Pruf009899.1
Basic Information
- Insect
- Physocephala rufipes
- Gene Symbol
- sip1
- Assembly
- GCA_963966595.1
- Location
- OZ016502.1:42460162-42467869[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-93 8.2e-89 298.3 11.8 1 275 423 697 423 697 0.98 2 2 0.078 9.4e+02 -0.4 0.0 241 269 708 736 701 742 0.78
Sequence Information
- Coding Sequence
- ATGTCcgataatgaatatgaaaaatttgagATAACAGATTATGATTTAGAAAATGAGTTCAATACGGACCGACCGCGCCGGAAGTTGACAAAACATCAACAAATATATGGTATCTGGGCGGATGATAGTGACAACGAAAGCGAAGATGAGTCCAGCAGTAGACGAGGTCGTCGTGGTCGACTGACTGGAAGAAAGAGTAGTGCTGGGAAACCTAAAGATTACAGTGCGCCCGTCAGTTTCGTGGCCGGTGGGATCCAGCAATCCGGCAAGAAAACGaatgaatcaaataaaactgGAAAAGACGAAATTGAAAATCCAATTACCGATGAAGAGGatGAGGTTCGACCATCGTTTCAGTGCAATCCAACATTGCAGCTGGGTGACGCAGAATTATCACAAGATTCAAGCACATCAGGCGATTCAAGAAAGGAGACTCCAACGCCATTAAAGAAAGACAGTAATAGTTTTGGTCAGGGCCGAAGGAAACACATTTCTGGAGATCGCCATGTGGGTGCTTGGGAACAACATACTCGAGGAATCGGCGCTAAATTATTGCTTCAGATGGGTTATAAGCCGGGTAAAGGGTTAGGTAAGGATTTACAGGGCATATCTCGGCCGGTAGAAGCGCATGTAAGAAAAGGCCGCGGTGCCATAGGAGCTTATGGACCAGAGGCAGCTGCGAAAATAAGTGACAAAGATGGAAAAAGTGTTaGCGCGAAAGAAGGTGAAGGAATGGTCGACACTAAGGAAAGCAAAGAGCATCTCactaaatggaaaaaaaatgATGCTCGACAGGATAAAACAAAACGCTATTGTTACAAATCGGTAGAGGAAGTAATAGAGAAGGGAAAGAAGAGTAACTTTCTGTTGCCTGAAAAATTAAGtaaGAAGCTCAGTAATGTGCCGGTAATTGATATGACTGGGCCTGAAAAACGTATTCTGAGCGGCTATCATGCTCTCGCTACGTCGAAAGTTATTGATGAGGATCTTTATGATTTGCAATCGATTGTTACGAcgtcaaaaaaatcaaatagttTCGATCTCCCTGAGCTTATGCATAACTTAACTGTTATTGTCGATAATTGCGAACGTGAAATTATTGCTATAGATTCGAGTGCTCGCTCAGCTAGCGATCGTCAACAAACCTTGGAAAATGAACgtaaaaatttagaagaaattgtaaaattggagCAGAATCATATTGATACGTTAGAAGGTGTTGAACAGCTTGTGTCTGAACTTACTGACACGGAGAAACCTGTTACGTTACAACGAGCTGAGAAGATCTTTTTAGAATTGCAATCAAAATATAGTGCGGAATATCAAGAATTCGGTTTAGGTGATCTGGCAGCTGGAGTTATTGCACCTCTTGTTAAGGCGACTGTAGACGCTTGGCAACCACTTACACATCCGACATTACATATTGACTTAATTAAGAAATGGCGCGGTATTTTGGAAAAGTATTCATCTGCTAATAGTAGTCCAACGCAAAATGAAGTACGTAATATTTTCGATCCTTATTCTTCGGTAATTTGGGCTGGCGTTATACCCAGTTTTCGGGCGTGTGCAACTGTTTGGGATCCTAAACAACATGAGCGCATGGCCGCATTACTTGATATCTGGGCACCGCTATTTCCCAGCTGGATTTTGGATTCTGTACTGGAACAATTGGTGCTACCTCGTCTTACTGCTGGAGTTAAAGAATGGGATCCATTAACGGATACAGTGCCAATCCATATTTGGATACTTCCTTGGGCTTCAATTTTAGGTCATAAAATGAAGGAAACAATTTTTCCTACAATTCGTGAGAAATTAGGTAGTGCTTTATTGGCTTGGATGCCACAGGATCGTTCAGCACGTGCCACTATATCACCGTGGAAGGGTGCGTTCGACGATGATGAGATGCAAACTTTTCTTATGCAGCATATTATACCTAAGTTACAGATAGttcttaatgaatttataattaatccaTTGCAACAGGATTTAGAGCCCTGGAATCAGGTTTGGGAGTGGCATGAACTTATACCTCCTATGCATATGGCGCATTTATTAGATAAATTCTTCTTTCCGAAATGGATGCAAGTTCTGGTTCTTTGGCTTAATCAAGCACCCGATTTTGTTGAGATATCGCGTTGGTATAGCGGTTGGAAGAGCATGATTTCTCCTGATGTATTAAAAGAACCAAATATTAAGGAACATTTTCGTCGTGCATTGGAAATCATGCATCGTGCTACGGAAACACCAAGAGCAACAATACCAATAAATATACCTACCGCAACACCAACACCGCCGCCTCCACCGCCACCAATGTTGAATTTCCAAGCGCCCGCACAATTAGAATTCAAGGAATTGGTTTCGCAGAAATGCGCAGAATTAGGTATACTTTTTGTTCCCTTACAGGGCAGACGGGAATTGGGTAAACAGATATATCGAGccggaaaattattttgctataTTGATCGTAACGTGATATTGATAAGTGATGGTAGTCTTAATAATTGGACGCCCACTTCCTTGACGAATATGTTAGAAAGTGCTGTTACTGATGAAATAATCATTCAAAGGGATCGGCAGAGAACAGCCAAGCTAAAGGCATTGCTAAATTGTAAGGATAAACATTTGAGACAAGAACGTTTACAATATGGAAATCATTGGCTGATACGGAATTATATAAGTGGTAGTGTTAGTCGTAGTGTTGGTTGTGCAAAGACAATTACATATACCACACACGGCGACTACACGTTCTTGGTGAATCTTCCGATTGTTGCAAAAAGGTGGTTGGCACCCATCAGTATTTCACTTTATGCACCAGGCTCTGATATAATTCCGACAATAAAATCTATTGACTACCTACGGGAATGCCTGCCAGAGAGTTCATTAATACGAAATTTTGTAAGTTTTCATATTTACTTCCCACGGGATCATATGGCGCAATTTCTACCACCGATGAGTAATGACGAAAAAACTCAATTATGGTCTCAAAGCTGTGCCGAACCACCGCCATACATCAATGTCAGTCGGGATGGAATGTACAAAACTCTTCACAATCTTACATATCCCATCAATGTTGGCCGCAATATTGCTCGCAAGTCAGTCAATACTCATTTTGTATTTGCTTgtgatattgaattatatccAAGCCCCggatttgtaaaaaaattcctCGATATGGTTGCTCGCAATCGAAGTGTTATAACGACGAACGGTACGAGTTCCAGAGTGTTTCCCATACCGGTTTTTGAGCTGCAAGAGAGCGTTAAGCTACCCATCAATAAGCAGGAATTGCAACAATTGTTTGTCACAGATATGGCGATTCCTTTCCATtcgaaaatatgtaaaaattgtCATGAAATACCAAATCAGATCGAGTGGTTGAATAAAACGACTGTTAATGAATTATCGGTTTTTGCGGTGATTAAACGAgaactaaaaatgaaatattgggAACCATTTTATGTGAGCGATAATCGCGAACCCATATTCGATGAACGAGTGACTTGGGAAGGACAAAAGAATAAACGGATACaggGTTTTGCCATGTGCCTAATGGGTTACGAGTACCACGTACTCAATGATGGCTTTCTCGTTCACAGACCAGGCATAAAAGTGTTTGACAAAAAATCGCCTCGTTTAAAATATGTGCCAGCAATGAATAAGCTAATCAGTAATAAAATAGTACCtgagtataaaatattatttggtaAAAATGAGAGATGTtttgtttaa
- Protein Sequence
- MSDNEYEKFEITDYDLENEFNTDRPRRKLTKHQQIYGIWADDSDNESEDESSSRRGRRGRLTGRKSSAGKPKDYSAPVSFVAGGIQQSGKKTNESNKTGKDEIENPITDEEDEVRPSFQCNPTLQLGDAELSQDSSTSGDSRKETPTPLKKDSNSFGQGRRKHISGDRHVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISRPVEAHVRKGRGAIGAYGPEAAAKISDKDGKSVSAKEGEGMVDTKESKEHLTKWKKNDARQDKTKRYCYKSVEEVIEKGKKSNFLLPEKLSKKLSNVPVIDMTGPEKRILSGYHALATSKVIDEDLYDLQSIVTTSKKSNSFDLPELMHNLTVIVDNCEREIIAIDSSARSASDRQQTLENERKNLEEIVKLEQNHIDTLEGVEQLVSELTDTEKPVTLQRAEKIFLELQSKYSAEYQEFGLGDLAAGVIAPLVKATVDAWQPLTHPTLHIDLIKKWRGILEKYSSANSSPTQNEVRNIFDPYSSVIWAGVIPSFRACATVWDPKQHERMAALLDIWAPLFPSWILDSVLEQLVLPRLTAGVKEWDPLTDTVPIHIWILPWASILGHKMKETIFPTIREKLGSALLAWMPQDRSARATISPWKGAFDDDEMQTFLMQHIIPKLQIVLNEFIINPLQQDLEPWNQVWEWHELIPPMHMAHLLDKFFFPKWMQVLVLWLNQAPDFVEISRWYSGWKSMISPDVLKEPNIKEHFRRALEIMHRATETPRATIPINIPTATPTPPPPPPPMLNFQAPAQLEFKELVSQKCAELGILFVPLQGRRELGKQIYRAGKLFCYIDRNVILISDGSLNNWTPTSLTNMLESAVTDEIIIQRDRQRTAKLKALLNCKDKHLRQERLQYGNHWLIRNYISGSVSRSVGCAKTITYTTHGDYTFLVNLPIVAKRWLAPISISLYAPGSDIIPTIKSIDYLRECLPESSLIRNFVSFHIYFPRDHMAQFLPPMSNDEKTQLWSQSCAEPPPYINVSRDGMYKTLHNLTYPINVGRNIARKSVNTHFVFACDIELYPSPGFVKKFLDMVARNRSVITTNGTSSRVFPIPVFELQESVKLPINKQELQQLFVTDMAIPFHSKICKNCHEIPNQIEWLNKTTVNELSVFAVIKRELKMKYWEPFYVSDNREPIFDERVTWEGQKNKRIQGFAMCLMGYEYHVLNDGFLVHRPGIKVFDKKSPRLKYVPAMNKLISNKIVPEYKILFGKNERCFV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00366500;
- 90% Identity
- -
- 80% Identity
- -