Cqua015679.2
Basic Information
- Insect
- Conops quadrifasciatus
- Gene Symbol
- sip1
- Assembly
- GCA_949752815.1
- Location
- OX457080.1:4591432-4598133[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-92 7e-88 295.3 13.6 1 275 423 696 423 696 0.97 2 2 0.023 2e+02 1.9 0.0 241 270 707 736 700 741 0.81
Sequence Information
- Coding Sequence
- ATGTCTGATAACGAATATGAAAAGTTTGAGATAACAGATTATGATTTGGACAAcgaatttaatataaatcgacCGCGTCGGAGGCAAACAAAGCATCAGCAAATTTATGGTATCTGGGCTGATGACAGTGACAACGAGAGTGAAGAGGAATCCAGCAATAGACATGGTCGCCGTGGTCGACTTGGTGTGGGAAAGGGTAATGCAGGAAAACCCAAGGATTATACAGCGCCCGTTAGCTTCGTGGCCGGCGGCATACAGCAATCTGGCAAGAAGAAAAGTGAGTCAGACCAATCTCAAAACGAGGAGACTGAGAATCCGATTACCGATGAAGAGGATGAAGCTCGACCGGCGTTTGGGCGAAATCCACCGTTGCAGTTAAGAAACACAGAACTTTCACAGGATTCAAGCGCATCATCTGACGAGTCGAAGAGGAAAACTCCACCACCATTGAAGCAAGATGGCGGATTTGGGCAGAGACAGAGAAAGCACGTTTCTGGAGATCGTAATGTGGGTGCTTGGGAGCAACATACTCGGGGGATCGGAGCTAAGTTATTGCTTCAAATGGGTTATAAACCAGGCAAAGGGTTAGGTAAGGATTTGCAGGGTATATCGCAGCCAGTAGAAGCGCGTGTAAGGAAGGGACGTGGTGCTATAGGAGCTTATGGACCCGAGGCAGCTTCGAGTATAAATGCAAAAGATGGAAATAATctgAAAGCGAAGGATGGCGAGGACTCAGTCGATACAAAGGATGTCAAGGAGCATCtcaataaatggaaaaaaggtGACACTCGACAGGACAAAACAAAACGCTATTCCTACAGATCGGTGGAGGAAGTAATAGAGAAGGGaaagaaaagtaattttatgcTGCCCCAGAAGTTAAGtaaaaaattagGTAACGTGCCTGTAATTGATATGACTGGACCGGAAAAGCGTGTTCTAAGTGGCTACCATGCGCTGGCTACGTCTAAAGTCCTTGACGAGGATCTTTACGATCTGCAGCCGATTGTTGCGACCACAAAGAAATCAGACAGCTTTGCCCTTCCCGAACTCGTGCATAATTTAACTCTTATTGTCGATAACTGCGAACGCGACATTATTGCTCTTGATAGCAGTGCTCGCACTGCCAGCGATCGCCAACAGGTTCTAGAAAACGAACgcaaaaatttggaagaaatcGTCAAATTAGAACGCAATCATATCGATACATTAGAAGGTGTTGAGCAACTTGTCTCTGAACTGACCGATACAGAAAGACCTGTTACTCTACAAAGGGCTGAAAAGATCTTTTTGGAGTTGCaatcaaaatttaatgcaGAATACCAAGAATTCGGCTTAGGTGATCTTGCAGCTGGAGTTATTGCGCCTCTTGTGAAAACGGCCTTAAATGCTTGGCAACCACTCGCCGAGCCAACGCTAcatattgatttaattaaaaagtggcGCTGCATTTTGGACAAATATTCTTCTGTTAATAATCAGACTCAAAATGAAGTACGTAATATTTTCGATCCTTACTCTTCGGTAATTTGGGCAGGCGTTATACCCAGTTTTCGGGCATGTGCAACTATCTGGGATCCGAAGAAGCATGAGCGAATGGCAGCATTACTTGACAGCTGGGCGCCACTATTTCCCAGTTGGATTTTGGACTCAGTGTTGGAGCAGCTGGTGCTACCCCGTCTTACTGCTGGAGTTAAGGAGTGGGATCCATTGACTGACACGGTACCAATTCACATTTGGATACTTCCTTGGACTTCTATTTTGGGTCATAAAATGGAAGAGACAATTTTTCCTACTATTCGCGATAAACTAGGTAGTGCTTTATTGGCTTGGATGCCCCAGGATCGATCGGCACGTGCTACTATATCGCCGTGGAAGGGTGCTTTCGACGAGGATGAGATGCAAATCTTCCTCATGCAGCATATTATACCTAAGTTACAAATAGTTCTGaatgaatttataattaatccATTGCAACAGGATTTGGAACTCTGGAACCAGGTGTGGGAGTGGCATGAACTTATACCTCCAATGCATATGGCACAATTATTAGACAAATTCTTCTTTCCTAAATGGATGCAAGTGCTTGTTCTTTGGCTTAATCAATCCCctgattttgttgaaatatcaCGTTGGTATACCGGCTGGAAAAGCATGATCTCCCCTGAAGTACTACAAGAACCAAGTATTAAAGAACATTTCCGTCGTGCACTGGAAATAATGCATCGGGCTACTGAAacgccaacagcaacaactccAGTAAATATACCAACTATaagcacagcaacaacaccaccgCCGCCTCCACCACCATCGTTATTGAATTTCCAAATGTCGACACAATTAGAATTTAAGGAATTGGTCTCGCAAAAATGTGCAGAATTGGGCATACTTTTTGCTCCCATGCCGGGTAGACGTGAACTAGGCAAACAGattTATCGCGctggaaaattattttgttacaTTGACCGGAATGTGATATTGATAAGTGATGCCAGTCTTAGTAAGTGGGCGCCCACTTCGTTGCCGAAGATGTTAGAAAGTGCTGTTACTGtaactCTTTTCTTTGCAATTTGCTTTTTCCTCTTTCTGCATCAAGTTTTTGATGTGAAAAATGTAACACGTATACGTGATGAAATggttgttttgaaaaatcacCGAAGAACAGCAATGCTAAAGACATTGTTGCACTGCAAAGATAAACATTTGGAAATGGAACGTCTGCAATACGGAAACTATTGGTTGGTACGGAATTTTATAAGTGGCAGTGTTAGTCGTAATATTGACTGTGCAGCAACGATTACATACACCACGCACGGCGACTATACCTTTTTGCAAAATCTTCCCATCGTGGTTACAAGGTGGTTGGCTCCCATCAGTATTTCACTTTTTGCACCCGGTTTTGATATCAATTCGACAATAAAATGTATTCAATATCTACGCGAATGCTTGCCTGAAAGTTTGTTGATACGAAAATTTGTAAGTTTTCATCTTTACTTTCCGCTGAATCATATGCCACCCGTTCTACCGCTGATGAGCAACGATGAACAAACCCAGTTCTGGTTTCAAAACTGTAGCGTACCACCACCGTACGCTGATGTTCGTCGCGATCATATGTACAAAACGCTTCACAATCTTACGTATCCCATTAATGTGGGCCGCAACATTGCTCGTAATTCGGTCAATACACATTTTGTGTTTGCGTGTGATATTGAACTATATCCCAGTCCAGGATTTGTGCAAAAATTCCTAGAAATGGTTGTTCGTAATTATAGTGTTATTATGACGAATGGTAGCAGTCCGAGaGTATTTCCGATACCAGTATTTGAGCTGCAGAAAGGTGTTAAACTGCCCAAGGATAAGCACGAATTGCATCAATTGTTCATTACGAAGATGGCGATTCCTTTTCAttcgaaaatatgtaaaaattgtcATGTGATACCAAATCAGACCGTTTGGTTGAATACTACAGCTATTAATGAACTATCAGTATTTGCGGTGATTAAACGGgaattaaagtttaaatattgGGAGCCATTTTATGTGAGTGAGAATCGGGAACCCATATTCGACGAACGGGTCACTTGGGAAGGACAAAAGAATAAGCGAATACAGGGTTTCGCCATGTGTCTAATGGGCTATGAGTATCATGTGCTCAATGATGGCTTTCTTGTTCATAGTCCAGGTATTAAggtttttgacaaaaaatcgCCTCGTTTGAAATATGTACCAGCCATGAATAAATTGATCACCGATACAATCGTATCTGagtataacattttatttggtaaaaataaaagatgctctgtttaa
- Protein Sequence
- MSDNEYEKFEITDYDLDNEFNINRPRRRQTKHQQIYGIWADDSDNESEEESSNRHGRRGRLGVGKGNAGKPKDYTAPVSFVAGGIQQSGKKKSESDQSQNEETENPITDEEDEARPAFGRNPPLQLRNTELSQDSSASSDESKRKTPPPLKQDGGFGQRQRKHVSGDRNVGAWEQHTRGIGAKLLLQMGYKPGKGLGKDLQGISQPVEARVRKGRGAIGAYGPEAASSINAKDGNNLKAKDGEDSVDTKDVKEHLNKWKKGDTRQDKTKRYSYRSVEEVIEKGKKSNFMLPQKLSKKLGNVPVIDMTGPEKRVLSGYHALATSKVLDEDLYDLQPIVATTKKSDSFALPELVHNLTLIVDNCERDIIALDSSARTASDRQQVLENERKNLEEIVKLERNHIDTLEGVEQLVSELTDTERPVTLQRAEKIFLELQSKFNAEYQEFGLGDLAAGVIAPLVKTALNAWQPLAEPTLHIDLIKKWRCILDKYSSVNNQTQNEVRNIFDPYSSVIWAGVIPSFRACATIWDPKKHERMAALLDSWAPLFPSWILDSVLEQLVLPRLTAGVKEWDPLTDTVPIHIWILPWTSILGHKMEETIFPTIRDKLGSALLAWMPQDRSARATISPWKGAFDEDEMQIFLMQHIIPKLQIVLNEFIINPLQQDLELWNQVWEWHELIPPMHMAQLLDKFFFPKWMQVLVLWLNQSPDFVEISRWYTGWKSMISPEVLQEPSIKEHFRRALEIMHRATETPTATTPVNIPTISTATTPPPPPPPSLLNFQMSTQLEFKELVSQKCAELGILFAPMPGRRELGKQIYRAGKLFCYIDRNVILISDASLSKWAPTSLPKMLESAVTVTLFFAICFFLFLHQVFDVKNVTRIRDEMVVLKNHRRTAMLKTLLHCKDKHLEMERLQYGNYWLVRNFISGSVSRNIDCAATITYTTHGDYTFLQNLPIVVTRWLAPISISLFAPGFDINSTIKCIQYLRECLPESLLIRKFVSFHLYFPLNHMPPVLPLMSNDEQTQFWFQNCSVPPPYADVRRDHMYKTLHNLTYPINVGRNIARNSVNTHFVFACDIELYPSPGFVQKFLEMVVRNYSVIMTNGSSPRVFPIPVFELQKGVKLPKDKHELHQLFITKMAIPFHSKICKNCHVIPNQTVWLNTTAINELSVFAVIKRELKFKYWEPFYVSENREPIFDERVTWEGQKNKRIQGFAMCLMGYEYHVLNDGFLVHSPGIKVFDKKSPRLKYVPAMNKLITDTIVSEYNILFGKNKRCSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200897;
- 90% Identity
- -
- 80% Identity
- -