Pate018027.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Phymatocera aterrima
Gene Symbol
tfip11
Assembly
GCA_963170745.1
Location
OY720668.1:1701460-1704873[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-101 2.1e-97 326.4 14.4 1 275 400 667 400 667 0.99
2 2 0.0069 84 3.0 0.1 244 272 681 709 672 712 0.86

Sequence Information

Coding Sequence
ATGTCCGAGGACGAAGTAGAGAGTTTCGAAATAACAGATTACGACCTTGACAATGAGTTCAACATTAATCGCCCGCGGCGAAAAATGTCTAAGAAGCAACAAATGCTCGGTATGTGGGCTGACGATAgcgacgaagaagaagtggCCGCGGCAAGACCTTCTTTCAAAACATTTAACCGTGGACCAAAAAACTACACAGCTCCAGTGAATTTTGTTGCTGGAGGTATTCAGCAGGCAGGAAAACCCAAAGAAGATACAAAAGAATCTGCTGATGAAAACGAAGACGATGACGAGGGTGGTAGACCAAGACGAGGCGATGCAGATTACGTTCCTAACAGCTCTAGCGACTCTGAAGAAGAGGGGCCAAGCTACACCAGGGCTAAAccatcattttcattaaatcTAGAAGGCGATATAGCAGgcttaagaaaaaaaagagctcCAGTTAACCCAACGCTTATAAAAGCAGGAGTTGGGAGTTGGGAGATGCACACAAAGGGTATTGGCGCGAAGCTCCTGCTCCAGATGGGTTTTGAACCTGGCAAAGGTTTAGGAAAGAAATTGCAAGGTATAATGGCACCTGTAGAAGCACATCTTCGTCGAGGGCGAGGAGCAATAGGTGCATACGGTCCAGAGAAACTAGCCAAAGTaccggaaaaaaagaaagacgagGATGTGGAGGAGCAGAAAGAATTCAAAGCGAAATTATCGCAATGGCGAAAAGGAGGGGAGCCagcaaacaagaaaaaagtgCGATACTACTATCGTAGCGTGGACCAAGTTCTagaagatggaaaattaaaaCCAAACAGAAAAGTCCAGTCTAACAGCGAAATGTGCAAAGTAAAAGTGATTGACATGACTGGACCTGAACAACGAGTATTAAGCGGCTACTACGCGATAGGCGGAGGACAACAACGCCCAGATGAAACTGCCGTTACAATAGATAAAAAGTCAAGTGTGAATTTTGCACTCCCTGAATTACGTCACAATTTAAATTTGCTCGTAGATCTATGTGAACAAGATATAATCCAAAATGATCGCAGGACGAGACACATGTCAGACAGAGTTATAGCTCTAGAATCAGAAAAATCGAACTTATCAAAAATAGTTGAACAGCATGAACAACTCATAAATACTTTGGACAACGTGCTAGCTATAGTCGATCAGTTAATGGACCGAACCAATGATTTATCTTTAGAAGAAACTGCAGATGCTTTCAAAGATCTGCAAGATAAATATTATGAAGAATATAAAATGTACGAGTTAGGTGATTTGGCTACCAGCTTAGTCGGTCCTAAAGTGAAGGAATTTTTAGCCACCTGGAATCCACTCTCTCAACCAAAACTCCCAATCCCTGTATTCAGGCAGTGGAAAAATATCCTCGAAACCGGAAGGAGCACTTTACAAACTTCGGCTCTTCAACCCTACGATCAACTAGTCTGGAACGCTTGGATGCCTTCCATCCGAGGCGCAGTACAacaGTGGGCTTGCAGGCAACCAGAACCTCTCGTTGAACTTCTTGAGCAATGGATGCCTCTCTTACCTGGATGGATATTAGAAAATATATTGGATCTTCTCGTCCTTCCAAAATTAACTCTGGAAGTCGAAGAATGGAATCCTCTAACAGACACGGTTCCAATTCACACATGGATTCATCCATGGCTACCGTTGATAGGAAATCGCCTGGACACAGCTGTGTATCCAATAATACGTCGTAAATTGGGTTCCGCATTAGGAGGATGGCATCCTTCAGACAGATCTGCAAGATTAATGCTACAGCCTTGGTCACAGGTCTTCAAAAAAGGAGATATGGAAGCTTTCTTAGTCAAGAATATTATCCCAAAACTGCAAGTAGTTTTGGCTGAATTTGTTATAAACCCGCATCAACAACACTTAGATCAATGGAACTGGGTTTTTGAGTGGAACGAAATGCTCCCCATTCATACTATGGCTGGACTTCTCAATAAATTCTTTTTCCCCAAATGGCTGCAAGTTCTAGCTCTCTGGTTAAATCACTCTCCTAATTACGATCAAGTCACCAATTGGTATATGGGGTGGAAAGGAATGTTGAGCGATAAATTACTCACCGAACCACAAATCAAAGAATACTTCAAGAAGGCTTTGGACATGATGAACAGGGCGGTCGCAGTACCACAAGGACATCAACCCGGTGCGATGGAGCAAGTTTCGTATTTAACAAATCTTGAAAGAACACAAACCGCTGGCCCAACAGTTGCGCCAACTGCGCAGCCCAGAATGGAGagAATCGCCGAGGCTGTAAGAACCGCTTCACAAATCCCTCAAGGTTTCAAAGACCTGATACAAAAGCGTTGCGAAGAAAGAGGAATTCTGTTTATGCCTATTCCGAACAGATACAGAGAATCTAAACAGGTTTATAAAGTTGGTAATGTACAAGCTTATATTGATAGaaatgttgtttttgtttgccATAATGGATCCACATGGGCGCCAACCCATCTTAACGCGTTACTCGACATGGCGGAGATTTGA
Protein Sequence
MSEDEVESFEITDYDLDNEFNINRPRRKMSKKQQMLGMWADDSDEEEVAAARPSFKTFNRGPKNYTAPVNFVAGGIQQAGKPKEDTKESADENEDDDEGGRPRRGDADYVPNSSSDSEEEGPSYTRAKPSFSLNLEGDIAGLRKKRAPVNPTLIKAGVGSWEMHTKGIGAKLLLQMGFEPGKGLGKKLQGIMAPVEAHLRRGRGAIGAYGPEKLAKVPEKKKDEDVEEQKEFKAKLSQWRKGGEPANKKKVRYYYRSVDQVLEDGKLKPNRKVQSNSEMCKVKVIDMTGPEQRVLSGYYAIGGGQQRPDETAVTIDKKSSVNFALPELRHNLNLLVDLCEQDIIQNDRRTRHMSDRVIALESEKSNLSKIVEQHEQLINTLDNVLAIVDQLMDRTNDLSLEETADAFKDLQDKYYEEYKMYELGDLATSLVGPKVKEFLATWNPLSQPKLPIPVFRQWKNILETGRSTLQTSALQPYDQLVWNAWMPSIRGAVQQWACRQPEPLVELLEQWMPLLPGWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLIGNRLDTAVYPIIRRKLGSALGGWHPSDRSARLMLQPWSQVFKKGDMEAFLVKNIIPKLQVVLAEFVINPHQQHLDQWNWVFEWNEMLPIHTMAGLLNKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKGMLSDKLLTEPQIKEYFKKALDMMNRAVAVPQGHQPGAMEQVSYLTNLERTQTAGPTVAPTAQPRMERIAEAVRTASQIPQGFKDLIQKRCEERGILFMPIPNRYRESKQVYKVGNVQAYIDRNVVFVCHNGSTWAPTHLNALLDMAEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00159103;
90% Identity
iTF_00718559;
80% Identity
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