Apag014286.1
Basic Information
- Insect
- Arge pagana
- Gene Symbol
- tfip11
- Assembly
- GCA_963969455.1
- Location
- OZ018314.1:13452550-13455569[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-99 7.7e-96 320.9 11.5 1 275 405 672 405 672 0.98 2 2 0.017 97 2.4 0.1 244 272 686 714 677 717 0.86
Sequence Information
- Coding Sequence
- ATGTCGGAAGACGAAGTGGAAAGCTTTGAAATCACGGACTATGATCTGGATAATGAATTCAATATCAATCGTCCCAGACGGAAATTATCGAAGAAGCAACAAATGCTTGGCATTTGGGCCGACGACAGCGATGATGACGCGGTACCTGCACGACCCTCTTTCAAAACCTTTCACAAAGGCCCCAAAAATTATTCTGCACCGGTAAGTTTTGTAGCCGGTGGTGTACAGCAATCTGGGAAACCTCAGGATGAGAAAAAGGCAAAAGATGATAATAaagatgatgatgacgacgacgacgatgacgacgatgaaagCGGAAGACCTCGTCGAGGTGACGACGATTATGTTCCGAACAGTTCTAGCGAATCGGATGACGAAGGGCCAAGTAGTTCCAGAGCAAGACCGTCATTTTCTTTGAATTTGGAGGGTGATATCGCAGgtttgcgaagaaaaagaactcCACTCAATCCGACTTTGATAAAAGCCGGGGTTGGTAGTTGGGAAATGCACACGAAAGGCATAGGAACAAAACTTCTACTTCAGATGGGGTTCGAACCTGGGAAAGGTTTGGGTAAGAAGTTGCAGGGTATAAGTGCTCCGGTAGAAGCACACTTACGGAAAGGTAGAGGAGCAATTGGTGCCTACGGTCCAGAAAAAAAGGTGAAGGTTGGAGAAAAACCAAAAGATGAAGATCTGGAGGAAGACaaagaattcaaaaaaaaattgtcgcaatGGCGCAAGAGTGATACGAGTGTTAAAAAGAAAGTCAGATATTGTTACCGAAGCGTTGACCAAGTGATCGAAGATGGAAAGTTGAGACCCAATCGAAAAGCTCCGCTCAACAGCGATTTGAGTAAAACAAAGGTCATAGATATGACGGGACCCGAACAGAGGGTGTTGAGCGGTTATCATGCCATAGGTGGAGGGCAGCAACGTCCCGATGAGGTTGTTCTAACTACCGATCGTAAAGTGAAGGCAAACTTTTCTCTCCCAGAGCTCCAACACAATTTGAATTTGCTCGTAGATATGTGCGAGCAAGATATTATACAAAACGATCGCAGAACACGTCATTTGTCTGACAGAGTCATTGCTCTGGAAGCTGAGAAAACAAACTTGTCCAAAATCGTGGAACAGCACGAGCAGCTAATAGACACGTTAGAAAATGTACTGACGATCGTTGATAAATTAATGGATGATTCCAACGATCTTTCCCTAGAAGGCACAGCCAAAGCTTTCAAATCCCTGCAAGATAAATACTACGAGGAATACAAAATGTATGAGCTAGGAGATTTGGCGACTAGTTTAGTTGGGCCTAAAATAAAAGACTATTTATCTACCTGGAATTCGTTGACTGAACCGAAAcatcctattccattattcaaacagtggaaaaatattttagaatGTGGACGAAGTACTCTACAATCCGGCGCCTTGCATCCGTACGATCAACTCGTTTGGAACGCTTGGATGCCATCGGTTCGTGGTGCCATTCAAGAGTGGTCTTGTCGGCAGCCAGAACCGCTTGTAGAGTTCTTGGAGCAATGGTTGCACCTTCTACCCGgttggattttggaaaatatcctCGATTTATTAATCTTACCAAAGCTGACTTTGGAGGTAGAAGAATGGAATCCTTTGACAGATACGGTTCCAATTCATACGTGGATTCATCCTTGGTTACCTTTGATAGGTAATCGTTTGGATACAGCCGTATATCCGatcattcgtcgaaaattgggATCAGCCTTAGGTGGTTGGCATCCGTCGGACAGATCGGCGAGATTGATGTTGCAACCGTGGGCGCAGGTTTTCAAAAAAGGCGACATGGATGCATTCcttgtgaaaaatatcattccaAAACTGCAAGTCTCTCTCTCCGAATTCGTCATCAATCCGCACCAGCAACACCTCGACCAATGGAATTGGGTATTCGAGTGGAAAGACATGCTACACACTCATACAATGGCTGGACTGCTAGACAAattctttttccccaaatGGCTACAAGTTTTGGCTCTTTGGTTGAATCATTCACCGAATTACGATCAAGTTACAAATTGGTACATGGGTTGGAAAGGGATGCTCAGCGAAAAACTTTTAGCTGAACCACAAATAAAAGATTATTTTAAGAAAGCTCTAGACATGATGAACAGAGCGGTGGCAGCACCTCAAGGTCATCAACCCGGGGCAATAGAACAAGTTTCATACCTAACAAATCTCGAGCGAACGCAGCAGCCGTCTATTCCGGCCAGTTCGCCAGCTTCGCAACCGAGATTGGAGAGAATCGCCGAAGCTGTTCGCACAGCTTCTCAAATTCCGCAGGGTTTCAAGGATTTGATTCAGAAACGATGCGAGGAGAGAGGAATACTATTCATGCCTATAGCAAACAGATACAGGGAATCAAAACAGGTGTATAAAATCGGTAACGTTCAGGCTTACATCGACAGGAACGTCGTCTTCGTTTGTCACAACGGATCAACGTGGGCGCCCACGCATCTCAACGCGCTCTTAGATATGGCAGAGATATGA
- Protein Sequence
- MSEDEVESFEITDYDLDNEFNINRPRRKLSKKQQMLGIWADDSDDDAVPARPSFKTFHKGPKNYSAPVSFVAGGVQQSGKPQDEKKAKDDNKDDDDDDDDDDDESGRPRRGDDDYVPNSSSESDDEGPSSSRARPSFSLNLEGDIAGLRRKRTPLNPTLIKAGVGSWEMHTKGIGTKLLLQMGFEPGKGLGKKLQGISAPVEAHLRKGRGAIGAYGPEKKVKVGEKPKDEDLEEDKEFKKKLSQWRKSDTSVKKKVRYCYRSVDQVIEDGKLRPNRKAPLNSDLSKTKVIDMTGPEQRVLSGYHAIGGGQQRPDEVVLTTDRKVKANFSLPELQHNLNLLVDMCEQDIIQNDRRTRHLSDRVIALEAEKTNLSKIVEQHEQLIDTLENVLTIVDKLMDDSNDLSLEGTAKAFKSLQDKYYEEYKMYELGDLATSLVGPKIKDYLSTWNSLTEPKHPIPLFKQWKNILECGRSTLQSGALHPYDQLVWNAWMPSVRGAIQEWSCRQPEPLVEFLEQWLHLLPGWILENILDLLILPKLTLEVEEWNPLTDTVPIHTWIHPWLPLIGNRLDTAVYPIIRRKLGSALGGWHPSDRSARLMLQPWAQVFKKGDMDAFLVKNIIPKLQVSLSEFVINPHQQHLDQWNWVFEWKDMLHTHTMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKGMLSEKLLAEPQIKDYFKKALDMMNRAVAAPQGHQPGAIEQVSYLTNLERTQQPSIPASSPASQPRLERIAEAVRTASQIPQGFKDLIQKRCEERGILFMPIANRYRESKQVYKIGNVQAYIDRNVVFVCHNGSTWAPTHLNALLDMAEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00175745; iTF_00060205; iTF_01200146; iTF_00175024; iTF_01411504; iTF_01413174; iTF_01303352; iTF_00939546; iTF_01414171; iTF_01412319; iTF_00174173; iTF_01048221; iTF_01048902; iTF_00718559; iTF_00719410; iTF_00938688;
- 90% Identity
- -
- 80% Identity
- -