Pate018319.1
Basic Information
- Insect
- Phymatocera aterrima
- Gene Symbol
- -
- Assembly
- GCA_963170745.1
- Location
- OY720668.1:6127866-6153442[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-06 0.049 13.3 0.1 44 123 28 109 25 137 0.67 2 2 1.7e-06 0.042 13.5 0.0 323 381 162 221 155 229 0.80
Sequence Information
- Coding Sequence
- ATGATGGGTTACCGGGCTACCGCTGCTTCCCTCTCCACCTACCCACGACACCTGGTTCACAACGTGAATCCAGATTCCCAAGATCGAACTACTCAACAGATACAATCGCAGTTGGGTAACTATGCCCTGGTCAAACACCTGCTGGATGAACCGAAGAGGCTGATTGGAATCGAAGGTGTACCGCCGAGTCCGGGTCCCTTGGCCCAACGGAAACCCACGACTCAGGAGTTCAAAAAGCCTGGAGGACCTCGTCCGAATTCCAGCGGTACACACGGCTCGCAGAATAGTGGTTACCTAAAACCAGCTGACGGTAAACCGCCTCATGTGGGAAGGGGCAGTTATTCTGGACAACCGGTAAAACATGGCGGCGGTAGCAACGATCATCGAAGTCACGGTCTTCTTCCAGCCAAAGGTCCTCCTAATCCTGCAGTCCGAGGGGGTGGAGGAGCAAGTAACCCCGTTGGAGGCTCAGGAAGATTACAGAACGCTGGAAGTCATCTTACCCGTTTACCGATGGACAATGGTGCAATGTCCAGGCATTCCGCGACCGAGAATGCTGCAGACTTGGATAACATTCTCAAGgaGATGGCGCTGCCCATCACGCCGCTGACAGCTATAGCCCAAACCCCACGTAAAGAaccagaatcaaaatttacCTTCAACCCATACCTCGCCAAGCTTACGGAAGTTCCTCCACCAGAGCCAATCAAAACTCGTGCGGGAATTTTGATGGATTTGCCAAGACAAGGAGGAAAACCCCCGGGCGGACCTGAGCTCACCAATATCTGGCATGTTTCCGATTGA
- Protein Sequence
- MMGYRATAASLSTYPRHLVHNVNPDSQDRTTQQIQSQLGNYALVKHLLDEPKRLIGIEGVPPSPGPLAQRKPTTQEFKKPGGPRPNSSGTHGSQNSGYLKPADGKPPHVGRGSYSGQPVKHGGGSNDHRSHGLLPAKGPPNPAVRGGGGASNPVGGSGRLQNAGSHLTRLPMDNGAMSRHSATENAADLDNILKEMALPITPLTAIAQTPRKEPESKFTFNPYLAKLTEVPPPEPIKTRAGILMDLPRQGGKPPGGPELTNIWHVSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303347;
- 90% Identity
- -
- 80% Identity
- -