Basic Information

Insect: Phragmatobia fuliginosa
Gene Symbol: -
Assembly: GCA_932526455.1
Location: CAKOBD010000067.1:2973647-2989105[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 4.3e-05 0.0038 18.3 0.6 1 23 205 227 205 227 0.99

2 30 0.00076 0.067 14.4 0.3 2 19 259 276 258 279 0.94

3 30 1.1e-05 0.001 20.1 0.1 2 23 314 336 313 336 0.96

4 30 0.00044 0.039 15.1 1.4 1 23 383 406 383 406 0.97

5 30 0.0023 0.2 12.9 1.5 1 23 424 446 424 446 0.95

6 30 5.9e-05 0.0052 17.9 1.5 2 23 482 504 481 504 0.96

7 30 0.031 2.8 9.3 4.2 2 23 544 566 544 566 0.97

8 30 0.0032 0.28 12.4 0.3 1 23 616 639 616 639 0.97

9 30 0.00049 0.044 15.0 0.1 1 23 693 715 693 715 0.97

10 30 0.0075 0.66 11.2 6.2 1 23 726 748 726 748 0.98

11 30 0.024 2.2 9.6 1.2 2 23 760 781 759 781 0.96

12 30 0.0013 0.11 13.6 1.5 1 23 791 813 791 813 0.98

13 30 0.0024 0.21 12.8 5.8 1 23 842 864 842 864 0.96

14 30 0.00052 0.046 14.9 3.3 1 23 875 897 875 897 0.98

15 30 1.2e-05 0.0011 20.0 0.7 1 23 905 927 905 927 0.98

16 30 0.00051 0.045 14.9 0.4 2 23 947 969 946 969 0.97

17 30 0.91 81 4.7 0.2 1 23 987 1009 987 1009 0.90

18 30 0.1 9 7.7 3.7 1 23 1016 1038 1016 1038 0.97

19 30 0.0062 0.55 11.5 1.3 2 23 1049 1071 1048 1071 0.94

20 30 0.016 1.4 10.2 0.2 2 23 1094 1115 1093 1115 0.95

21 30 0.0093 0.82 11.0 0.2 2 23 1196 1217 1195 1217 0.95

22 30 2.5 2.2e+02 3.3 4.8 3 23 1225 1245 1223 1245 0.96

23 30 0.013 1.1 10.5 0.8 2 23 1256 1278 1255 1278 0.95

24 30 0.011 0.94 10.8 2.4 2 23 1295 1313 1295 1313 0.96

25 30 0.62 55 5.2 1.9 2 21 1317 1336 1317 1337 0.93

26 30 3.4 3e+02 2.9 2.7 2 23 1360 1381 1360 1381 0.93

27 30 1.6 1.4e+02 3.9 0.6 2 23 1388 1409 1387 1409 0.93

28 30 0.0002 0.017 16.2 1.0 2 23 1420 1442 1419 1442 0.96

29 30 5.6 5e+02 2.2 0.4 3 23 1459 1476 1458 1476 0.76

30 30 1.9 1.7e+02 3.7 4.2 2 19 1480 1497 1479 1500 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	4.3e-05	0.0038	18.3	0.6	1	23	205	227	205	227	0.99
2	30	0.00076	0.067	14.4	0.3	2	19	259	276	258	279	0.94
3	30	1.1e-05	0.001	20.1	0.1	2	23	314	336	313	336	0.96
4	30	0.00044	0.039	15.1	1.4	1	23	383	406	383	406	0.97
5	30	0.0023	0.2	12.9	1.5	1	23	424	446	424	446	0.95
6	30	5.9e-05	0.0052	17.9	1.5	2	23	482	504	481	504	0.96
7	30	0.031	2.8	9.3	4.2	2	23	544	566	544	566	0.97
8	30	0.0032	0.28	12.4	0.3	1	23	616	639	616	639	0.97
9	30	0.00049	0.044	15.0	0.1	1	23	693	715	693	715	0.97
10	30	0.0075	0.66	11.2	6.2	1	23	726	748	726	748	0.98
11	30	0.024	2.2	9.6	1.2	2	23	760	781	759	781	0.96
12	30	0.0013	0.11	13.6	1.5	1	23	791	813	791	813	0.98
13	30	0.0024	0.21	12.8	5.8	1	23	842	864	842	864	0.96
14	30	0.00052	0.046	14.9	3.3	1	23	875	897	875	897	0.98
15	30	1.2e-05	0.0011	20.0	0.7	1	23	905	927	905	927	0.98
16	30	0.00051	0.045	14.9	0.4	2	23	947	969	946	969	0.97
17	30	0.91	81	4.7	0.2	1	23	987	1009	987	1009	0.90
18	30	0.1	9	7.7	3.7	1	23	1016	1038	1016	1038	0.97
19	30	0.0062	0.55	11.5	1.3	2	23	1049	1071	1048	1071	0.94
20	30	0.016	1.4	10.2	0.2	2	23	1094	1115	1093	1115	0.95
21	30	0.0093	0.82	11.0	0.2	2	23	1196	1217	1195	1217	0.95
22	30	2.5	2.2e+02	3.3	4.8	3	23	1225	1245	1223	1245	0.96
23	30	0.013	1.1	10.5	0.8	2	23	1256	1278	1255	1278	0.95
24	30	0.011	0.94	10.8	2.4	2	23	1295	1313	1295	1313	0.96
25	30	0.62	55	5.2	1.9	2	21	1317	1336	1317	1337	0.93
26	30	3.4	3e+02	2.9	2.7	2	23	1360	1381	1360	1381	0.93
27	30	1.6	1.4e+02	3.9	0.6	2	23	1388	1409	1387	1409	0.93
28	30	0.0002	0.017	16.2	1.0	2	23	1420	1442	1419	1442	0.96
29	30	5.6	5e+02	2.2	0.4	3	23	1459	1476	1458	1476	0.76
30	30	1.9	1.7e+02	3.7	4.2	2	19	1480	1497	1479	1500	0.92

Sequence Information

Coding Sequence: ATGGCCCTCAAACTTGGAAAATGCAGGCTCTGCCTCAAACTTGGGGACTTTTATTCCATCTTCACGGTGGACAATTCATTACAGCTCGCAGAAATGGCAATGGAATGCGCCCGGATAAAGATATATGATGGTGATGGACTTCCTGACAAAGTATGTTCAGAATGCATACAGAAGCTAAGCAGTGCTTATATATTCAAACAACAATGTGAGCGAGCAGACCAAGAGCTGCGGCGGAACTATGTCCCACCGCCAGGATTCAGTATCAGTCCACCACCACCTAACAGACAGAGTAGTGACTCTGCCTTCTCAAATCACACTGACAGCTCTAACCTTACCAAACCCTCGTCTTCCTTTGAAGAAAAGATATCTCCAGCTACCAGAACGCGGAAACGTAGTGTGGAGAGCGATGGAAACATCTCGATAGGTGGTCAGTCAGCCAGCGATTTTAGACCAACTGGCTCAAAGCGGATCGAGGAACTTAAAAATTCTCATAAAAAGAGGCCCCGCTTGCCATCTGAAAACACTTCACAGCCAGACTCTGACTATGAGGACAATAATAGTGGATCATACTTACCAGAAACTGACTCGGATGAACCACTTGTAAAGAAGATGTTCAAGTGCAAGTCATGTCCGAAACAGTTTCCAACTTACAAAGGTTTGGCCAACCACATTAGAGTTCATTCTAAAAGCAATAATAAGACACTTGACGTAAATACCATTGTAGACGAACCAAAGAACAGTATCGAGGATGCTGCAGATGTCGAAGATAAGCTGAGCTGTGATAAATGTGGTAAAACCTTTAAACTGAAGATAATGCTAAAACGTCACTCTGATGTGTGCTTGAAAACACCTGTTAAGTCACCACAGAAAGAGCTACTTATATCCCTAGCGCCTATAGATGCAAAAACAAATACACCACTGCAGACTGCACCAACAATACCATGTGAATATTGCGTCGCTACGTTTAAAACTCAGGATAACTTAGCGAAACATATGAAAGTAGTTCATGCTGCTGTTCTGAAGAGAGAAGCTGATGCAAACAGAAAGGTGCCAGTTCCTTGCTTGTATTGCAATATCATGTTCGATGACTATCAGCAACACAATGCGCACTTTGTCGAATGTCCAAAATTGGATGAGACTAAGCCGTTTGTGTGCCCTGTATGTGACAAATTTACATCTAGGAGGATGTCTTACTTTCAACATCTTAGGAACATGCACTTTGAACCTCGCGTTACTTACGTGGAACCGGAAATTGAAATGCACGAATACCACGAGTGTCGGGTGTGTTCAAAGAAGTTATCGTCTAAGGAACAACTAATCAAGCACTTGTCCGCTCATGTGTCCAATATCCAGGATGATGGCACACTTGAAAATGATTCCAGGGATGATGCTGATTCTGTCCATTCAGTGCAAAGCAATACATATCCAGCTGGAGGCCCGTTGAAATGTGAAGTTTGTGACAAAGAATTTAAATACAAAAAAGCTTTGTTAACGCATCAACAAAGGTTTCACACAGATACCCCGCCAGTTGAAGTTAAAATCGAACCGCCTGATAAAGCTTCCACAAGTCTTTTGAGCGAGAAGCGGTATCGATCAGAATCAGAATCTAGTCAAGAAGAAGAAGACAACACGTGCGATATTTGCGAGAAACGTTTCTCCTACAAACGTATTTTGCTTCACCACAAGAGAACAAAGCATAACATGAGCTCGGGCCACAAACGCGCTAAGATCTACCTCAAGGACTGCTCCGTCCGCTGTCTCATTTGCGATCTGCAAATGAAAGTTGGCGACATAAATGAGCACAATCAAACGCACATTTCAAAGAATATGAAGCCCAGAAATTTGTACACGTGCGCGGAATGCGAAGCCACATTTAAAGCGTGCAGTGCACTCGCAACTCATATAAAACTAGTACATAGATTAAAACAGAAAGTGGAAATGAATACGGTAAATCCGTCGGATTTTTGTGAGGTCGTTGTGACAAAGTCGGAACCGCTGGACTGGATCCAGAGTCACAACGACTTTGGTGAGGTTCCGATTGAGAATGACGGCAAGCCACTAGTAAACCTGAGTGGCTTTACGTGTCCCATCTGTGGGAAGAAAATGCCCACACTGATATCACTGAAGAGACACGTGAATTGGCACACTAATGTGGGCAAGAACTTGGAAAAGAAATACGAATGCTTTGTCTGTAAAGAGGCTTTCAGATTCCAATGTCACTACAAGCTACACATGCGCGAACACTACACAGACACAAATCTGGATCCGAGACATCTTACGTGCACCATCTGCGGACGCAAGAGCAAACACCTACGCGCCGCTCAAGCGCATATGACCTACCACAAACAAACTCGCTTCAAGAACAAAGACTACCAATGCTCCATTTGCGAAAAAGTATTCCAGCATAGAAAAGTGTACCTCTCTCACATGGCCATACACTACAAGAGAGGAGAAAGCGTTCAAAACACCATCGTCGGTTCCGTCTTACCTAACACTGCCGACAAGAACACATTCGACGGAACCCATACCTGCGTGCACTGTGGTAAGGTCTGCGATTCTGAAAGTTCTCTAAAACATCATCTCATTTGGCACAATTCTAAGACTTTCTTATACGGCGCTCGGCACGAATGCACGATTTGCAAAATCAAATTTACTAATAAAAGACGACTCGAAATTCACACGAGAATGCATTATGAAGACGACAATGGGCCCTACAAGTGCAACATTTGTGGTAAAGGATACACAGACGAAGGTTATTTCAAAAAACATGTCAAGGGCCACAATTTCGATCACCAATCGCATAAAAAGAGGTTAGAGAACATCAGAAAAGATAAAGTGAAGTGTCCAATATGCTCTCGGTACTATAATGACCTAGTGAAACTCATCCGGCATCTCAGACGGACGCACCCCGAGAGTAAGATGATCAAGTCTGACCCGGATGCGCCCGCACAACCTTACTTTTCATGCAAGCTATGCGCCAAAGTGTTCTTAGATGAGAGAAGACTTCAAGCGCATGAAGAAGCGCATTTAAGGAAGCCAGAATTCTTTAAATGTAAGTTCTGCGGAAAGAAGACAATATCGTTGAAGAATCACAGAGTGCACATCAAGGGTCATTTGACACAGAAGTACTTAGACAACCCTCTGAAATGTCCGCACTGTGAAGAGACGTTCGGGCGAGGCTACGATCTGCACTACCACGTGCGCGACGTCCACGGCATCGAGGAGACGTGGATCGCGGACCGAACCGAGCAGCGCCTGGCCGGACCGCTCAAGGACCTGCAGTGCTCCATCTGTATGAAGGTCCTCGCCAGCAAAGGAAACTTCGAGCGCCACCTCGACTATCATAATTCTTTAAGGTGCAACTACTGTTTTGATTACTTTAGCTCTCTTCGGTTCTTAGAGGGTCATCTCACATTTTCATGTGATAAAAAGAAACTTTTGGGTGACACGGAGATTTATACCAAGAAAATAAAATGTCACAAATGTTACAAACCCTTCCATGTTCAGGTAAAACTAGACTGTCACCTGCGCACGCAACACGGTATCAAAGTGAACAGGGAAGCTTCGTCAGGCAAAAAAGAAATCGTATGTGATTATTGCTTTAAAGTATTCGAGAATGACTATGCTCTGTCGACACACAAAATTTATCATCGTACTATTGGATACTATGGGTGTCTTTATTGCAAGCGAAAGTTTAACACGATGACAGTTTATCGAAAACATAAGAATCACCATTTAGCGCAGCAAAATGTAGACGACCCGACCAAGTGCGAACATTGTGATGAGACATTCGTAGCGTTCCGAGACATGATTTATCATATGAGGGACGTCCATGGCGATGATAAAGAGTGGGTGACGATGCCGAAGGAATCGATAGAGGAAACATGCAAAATCTGTAACAAAACATTCTACAATTTGCAAAGACATCTAATGTATCACGAGGAAAACAGGTGCAAAAAATGCGGCGAATACTTCTTTTCTACGGCTGATTTCGATAACCATCTGTGCTCTATAGAAAGCGATGACGACGAAAACGCCAACGGTGTGGACAGCACCATCGAGAAACCTAAGTATGAGGAGTGCAGCTTCTGCTTTAAACCGACCACCAGAAAAAGTTCTAAAGCGATGCACGAACACATCCACAAGGGCTCAGGTTCTATATCATGTAGGTTCTGTGTACTTAAGTTCAAGACTATGGATGCATTCAACATCCATGCCTTCTCACACCGAAGCAGAAAGTATAACAAGAAGCCCATAAAGTGCAAGAAATGTGGTGAGAAATTCGTAAAGTACGGGCTTTTTATGAAGCACATGAAACTCGTGCATAAGGCGATGAAAAAGATGCATTACAGAGCTATAGTGAAGCCGGAGCCGTGCGTGGTGTGCGGCGAAGATTTCCCCAACCTGCACAACCACTACCGCGCGCACTTGCTCAACCAGTGCCAGTCTTGTCACAAATACTTCACATCCTCCAAACTATTCTCTTTGCACGAATGTGACAAAGAAGACTCTGATCCTTCTAAAGTATTCACCTGTGATGTGAAGTTGAACGAACTGATAAACTCGTACGTACCTAAAGATATGAAGGACGATGAGAAGTATTATGGCAATACTGACGACGAAGAAGAGGAAGACGATTTGGCTATTCAGGTGTGCGGTGAAGATGAAGAGAGTCAAGACGACAATGACATTGATATTAAAGACATTGATATTGATGAAAATAATATAACTAATCAACCGTTGTCTATCCAGTCGCCGATTATATCTGATGTGTTGTCGCTCTACCAAAAGGAAATGAATCCCGAAGTCGTGGACGATAATATTGTAAACTTAACCGATGATGATTCTGACGTGGATACTGTAGCCCAAAATCATACTGATACTATCGTTATTGATGATGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMAMECARIKIYDGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSNHTDSSNLTKPSSSFEEKISPATRTRKRSVESDGNISIGGQSASDFRPTGSKRIEELKNSHKKRPRLPSENTSQPDSDYEDNNSGSYLPETDSDEPLVKKMFKCKSCPKQFPTYKGLANHIRVHSKSNNKTLDVNTIVDEPKNSIEDAADVEDKLSCDKCGKTFKLKIMLKRHSDVCLKTPVKSPQKELLISLAPIDAKTNTPLQTAPTIPCEYCVATFKTQDNLAKHMKVVHAAVLKREADANRKVPVPCLYCNIMFDDYQQHNAHFVECPKLDETKPFVCPVCDKFTSRRMSYFQHLRNMHFEPRVTYVEPEIEMHEYHECRVCSKKLSSKEQLIKHLSAHVSNIQDDGTLENDSRDDADSVHSVQSNTYPAGGPLKCEVCDKEFKYKKALLTHQQRFHTDTPPVEVKIEPPDKASTSLLSEKRYRSESESSQEEEDNTCDICEKRFSYKRILLHHKRTKHNMSSGHKRAKIYLKDCSVRCLICDLQMKVGDINEHNQTHISKNMKPRNLYTCAECEATFKACSALATHIKLVHRLKQKVEMNTVNPSDFCEVVVTKSEPLDWIQSHNDFGEVPIENDGKPLVNLSGFTCPICGKKMPTLISLKRHVNWHTNVGKNLEKKYECFVCKEAFRFQCHYKLHMREHYTDTNLDPRHLTCTICGRKSKHLRAAQAHMTYHKQTRFKNKDYQCSICEKVFQHRKVYLSHMAIHYKRGESVQNTIVGSVLPNTADKNTFDGTHTCVHCGKVCDSESSLKHHLIWHNSKTFLYGARHECTICKIKFTNKRRLEIHTRMHYEDDNGPYKCNICGKGYTDEGYFKKHVKGHNFDHQSHKKRLENIRKDKVKCPICSRYYNDLVKLIRHLRRTHPESKMIKSDPDAPAQPYFSCKLCAKVFLDERRLQAHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYLDNPLKCPHCEETFGRGYDLHYHVRDVHGIEETWIADRTEQRLAGPLKDLQCSICMKVLASKGNFERHLDYHNSLRCNYCFDYFSSLRFLEGHLTFSCDKKKLLGDTEIYTKKIKCHKCYKPFHVQVKLDCHLRTQHGIKVNREASSGKKEIVCDYCFKVFENDYALSTHKIYHRTIGYYGCLYCKRKFNTMTVYRKHKNHHLAQQNVDDPTKCEHCDETFVAFRDMIYHMRDVHGDDKEWVTMPKESIEETCKICNKTFYNLQRHLMYHEENRCKKCGEYFFSTADFDNHLCSIESDDDENANGVDSTIEKPKYEECSFCFKPTTRKSSKAMHEHIHKGSGSISCRFCVLKFKTMDAFNIHAFSHRSRKYNKKPIKCKKCGEKFVKYGLFMKHMKLVHKAMKKMHYRAIVKPEPCVVCGEDFPNLHNHYRAHLLNQCQSCHKYFTSSKLFSLHECDKEDSDPSKVFTCDVKLNELINSYVPKDMKDDEKYYGNTDDEEEEDDLAIQVCGEDEESQDDNDIDIKDIDIDENNITNQPLSIQSPIISDVLSLYQKEMNPEVVDDNIVNLTDDDSDVDTVAQNHTDTIVIDDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01502316;
90% Identity: iTF_01360905;
80% Identity: -