Pful020794.1
Basic Information
- Insect
- Phragmatobia fuliginosa
- Gene Symbol
- -
- Assembly
- GCA_932526455.1
- Location
- CAKOBD010000117.1:1826727-1829069[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0044 3.5 8.4 0.9 18 43 9 31 5 32 0.93 2 19 0.00075 0.61 10.9 0.0 18 43 68 90 61 91 0.85 3 19 1.7e-05 0.014 16.1 1.6 17 44 98 122 96 122 0.94 4 19 0.0018 1.5 9.6 2.7 18 44 129 152 125 152 0.91 5 19 0.00024 0.2 12.4 1.3 15 43 157 182 154 183 0.89 6 19 6.3e-05 0.051 14.3 0.2 17 43 188 211 184 212 0.89 7 19 1.6 1.3e+03 0.3 0.5 17 29 219 231 214 243 0.75 8 19 0.1 82 4.0 1.1 16 44 254 279 239 279 0.85 9 19 0.069 56 4.6 0.2 15 43 302 327 285 328 0.88 10 19 1.1 9.1e+02 0.7 0.0 15 26 361 372 357 378 0.82 11 19 0.031 25 5.7 4.0 14 43 406 432 402 433 0.89 12 19 0.31 2.5e+02 2.5 2.3 16 29 437 450 433 462 0.72 13 19 0.0031 2.5 8.9 2.6 12 43 462 490 453 491 0.78 14 19 0.22 1.7e+02 3.0 0.6 18 44 497 520 492 520 0.75 15 19 0.63 5.1e+02 1.5 0.8 18 28 527 537 522 550 0.82 16 19 3.9 3.2e+03 -1.0 0.9 19 43 558 579 553 580 0.74 17 19 0.0013 1.1 10.1 1.1 15 44 620 646 607 646 0.80 18 19 9.9 8e+03 -2.3 0.1 13 29 661 677 658 691 0.72 19 19 0.19 1.6e+02 3.2 0.6 12 27 690 705 677 708 0.77
Sequence Information
- Coding Sequence
- ATGTATCACAATCAGCTGGACTTTGTTTGCGATTACTGCTCCAGAACTTTCACAAGAAAATATAACCTCCAAACACATATAGAAAACTGTCATATAAATTCAACATCACACTGTGATATTTGTGAACAAAGTTTCGGAAGTCCAGCTGGCTTACAACTCCATCTATCTAGAGGCCACAACAGCTATGCCCAACCGTTCCCGGAATGTGATATATGTGGAAGAATATTTACAAGAAAACAAAACATTACATCTCACATGATCACCGTACATTTACAAGGTTTAGGGGATGATATACGTTGTAAACTGTGCAATAAAACCTTCACTACGGAGAGAAATTTGAAGCGTCATATGAACCAGCAACATAATCCACATGCGCAATATCCCACATGCTATTATTGTAACAAGACCTTCAAAGGTAAACACTCACTCATTTCACACATCCATACAATTCATAATGTCAATGAAAAAGATGCTATAAAATGCCACTTGTGTGAGAAAGTGTACACAAATATGAGGAACTTAAAGAGACATGTTGAAATGTTTCATGGTGAACGAGGGGAGTTCAAATGTGATATATGCCCTAAAGTTTATACATCAAATCAAAGTTTAAGGAGACATCTTCGCACAGCACATACCACAGACAGTAATGAACAGTTTACATGCAGCTTGTGTGCTAAAATTATCATCGGTAGGGAAAACTATGATAGTCATTTACAGTATATACATCACTATGAAACTGAATCTAAAGTTAATATCAGTGAAATCATTTGTGAAACATGTCACCAGACATTTGAAGAAGAATCTCTATTACGGCAGCATGTCAAGGAAAATCATTCTTTCAAAGCATTTTATAAGTACTGTAGGAATGTCTTGTTGAAACAGTATGGTGCTGAGTTTGTTAATAATATATATAATTGTGAATATTGTCAAAACACGTTTCCTAGTGTGTACGAGCTAAAAGATCATATGCGGGTAAATCATGACACTGAATACTCTCTCTCAACTTGTAATGTATGTTTTAACAAGTTTTACTGTAAGGAAACTATGAGTGCCCACAAAAAAGTATGTCTACCCCCACCGAACGTAAATTCTTGCAGTCATTGTGACAAGCTGTTTACTGATATCTCTAGTTTAGAATTCCATAAAAGAATATTTCACCCCCAAGCACAGATTGCTGACTCAAATATATCTTCAACGAATATGGATGAAGATTTATCAACATCGTTCAAATGCCTGCATTGTGATCGGATATATTATAGTGACCGATCATTAAAACATCATATTAAGTTGAAACACACTTCCGATGAACAAGTGGGATGTGAGTTTTGTGGTAAAATTTGCAGCAATAAGTACTATTTGGCTTCTCACATCAAAATAGTGCATAACAATGATTCTTGGTCTCGTTGTGAGTACTGTGATAAACAATTCAAATCTAAACGGAATATCAGAAGGCACATTGAGTACACACATCTAGGTATGCAAAGATACAAATGTGTGGAATGCGAGACGTTGTTTAAAGAGAAACGCAGCTTACGAAAACACGTCAGGACAAAACACCCAAATTCGGCCTCATTCCCTCAGTGCCATATATGTCACAAAAGATTTGAATCGGCCAAGTCCTGCAAGATTCATCTCAAACTGTTACATTCATTCAATATGAACACATATCCATGCCACTTATGCTCTGTGTCATTCAGCTCTAATGAAGCTTTGACGATACATTTGAATACAAAACATTTAGCTGAAGACGAAATATACAAGTGCGAAGAGTGCAATCTCGTTTTCAAAGGTCAAGAGCGTTTTGACAGACACAACGGAGTGAGCCATGTTAATCTCGTGCCAAATATAAAGCAAAAACTTTTGCCTAGATGCATTCTCTGTTTGAAAGATTTTAGCACGCGTAAAACTTTAAAAAGGCATATCAAAAAGTTTCATAACGAATTTGACGTTGATGAACTCGCTACTTTTGGGTCGAGAAGGAGAAACTTCACAATAGATTGTGAAGATTGTATCAAGAATTTCAGTGATGAGTTTTATTACAATGTGTACCAAAAGATAAAGCATTTGAAAGATTCGGTTATATTCAAGTGTGAGTATTGTCATTCATCGTTCAGTGCTCTTGAATATGCTATTCAGAGGTATAAGATTACTAATAGCGATGCTTGCAAAACAAAGGCAATTCTAAGCGAGCTCTGTACTACTGAAATGAGTGAAGAAGAGTCCGAGGTTTCTGGGTTTGGTTCTCTTCATCAGCTCCCAGAGAGCACAACAAGTAACTTCAATATTAAACAAGAACCTTTTATGGATGAAGACGATATCAAAAAGGAACCTTTGTCGCCGTAA
- Protein Sequence
- MYHNQLDFVCDYCSRTFTRKYNLQTHIENCHINSTSHCDICEQSFGSPAGLQLHLSRGHNSYAQPFPECDICGRIFTRKQNITSHMITVHLQGLGDDIRCKLCNKTFTTERNLKRHMNQQHNPHAQYPTCYYCNKTFKGKHSLISHIHTIHNVNEKDAIKCHLCEKVYTNMRNLKRHVEMFHGERGEFKCDICPKVYTSNQSLRRHLRTAHTTDSNEQFTCSLCAKIIIGRENYDSHLQYIHHYETESKVNISEIICETCHQTFEEESLLRQHVKENHSFKAFYKYCRNVLLKQYGAEFVNNIYNCEYCQNTFPSVYELKDHMRVNHDTEYSLSTCNVCFNKFYCKETMSAHKKVCLPPPNVNSCSHCDKLFTDISSLEFHKRIFHPQAQIADSNISSTNMDEDLSTSFKCLHCDRIYYSDRSLKHHIKLKHTSDEQVGCEFCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCVECETLFKEKRSLRKHVRTKHPNSASFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALTIHLNTKHLAEDEIYKCEECNLVFKGQERFDRHNGVSHVNLVPNIKQKLLPRCILCLKDFSTRKTLKRHIKKFHNEFDVDELATFGSRRRNFTIDCEDCIKNFSDEFYYNVYQKIKHLKDSVIFKCEYCHSSFSALEYAIQRYKITNSDACKTKAILSELCTTEMSEEESEVSGFGSLHQLPESTTSNFNIKQEPFMDEDDIKKEPLSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00677880;
- 90% Identity
- iTF_00707186;
- 80% Identity
- iTF_01198005;