Basic Information

Insect: Phortica okadai
Gene Symbol: -
Assembly: GCA_034638295.1
Location: CM067850.1:6037968-6043872[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.5e-05 0.0023 18.6 2.1 1 23 353 375 353 375 0.97

2 18 8.3e-06 0.00077 20.1 0.4 1 23 381 403 381 403 0.97

3 18 0.00091 0.084 13.7 0.5 1 23 409 431 409 431 0.95

4 18 1.8e-05 0.0016 19.1 3.1 1 23 437 459 437 459 0.97

5 18 4e-05 0.0037 18.0 4.7 1 23 465 487 465 487 0.99

6 18 7.3e-05 0.0068 17.2 5.7 1 23 493 515 493 515 0.97

7 18 3.6e-07 3.3e-05 24.4 4.3 1 23 521 543 521 543 0.98

8 18 1.3e-07 1.2e-05 25.8 2.4 1 23 549 571 549 571 0.97

9 18 7.5e-05 0.0069 17.1 6.7 1 23 577 599 577 599 0.97

10 18 0.00013 0.012 16.4 6.5 1 23 605 627 605 627 0.98

11 18 1.2e-05 0.0011 19.7 4.5 1 23 633 655 633 655 0.98

12 18 8.4e-06 0.00078 20.1 8.1 1 23 661 683 661 683 0.98

13 18 6.5e-06 0.00061 20.5 7.8 1 23 689 711 689 711 0.97

14 18 7.6e-07 7.1e-05 23.4 7.7 1 23 717 739 717 739 0.98

15 18 4.2e-05 0.0039 17.9 6.9 1 23 745 768 745 768 0.97

16 18 3e-05 0.0027 18.4 0.8 1 23 774 796 774 796 0.98

17 18 0.0009 0.084 13.7 4.4 1 23 806 828 806 828 0.98

18 18 1.1e-05 0.00098 19.8 1.6 1 23 834 857 834 857 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.5e-05	0.0023	18.6	2.1	1	23	353	375	353	375	0.97
2	18	8.3e-06	0.00077	20.1	0.4	1	23	381	403	381	403	0.97
3	18	0.00091	0.084	13.7	0.5	1	23	409	431	409	431	0.95
4	18	1.8e-05	0.0016	19.1	3.1	1	23	437	459	437	459	0.97
5	18	4e-05	0.0037	18.0	4.7	1	23	465	487	465	487	0.99
6	18	7.3e-05	0.0068	17.2	5.7	1	23	493	515	493	515	0.97
7	18	3.6e-07	3.3e-05	24.4	4.3	1	23	521	543	521	543	0.98
8	18	1.3e-07	1.2e-05	25.8	2.4	1	23	549	571	549	571	0.97
9	18	7.5e-05	0.0069	17.1	6.7	1	23	577	599	577	599	0.97
10	18	0.00013	0.012	16.4	6.5	1	23	605	627	605	627	0.98
11	18	1.2e-05	0.0011	19.7	4.5	1	23	633	655	633	655	0.98
12	18	8.4e-06	0.00078	20.1	8.1	1	23	661	683	661	683	0.98
13	18	6.5e-06	0.00061	20.5	7.8	1	23	689	711	689	711	0.97
14	18	7.6e-07	7.1e-05	23.4	7.7	1	23	717	739	717	739	0.98
15	18	4.2e-05	0.0039	17.9	6.9	1	23	745	768	745	768	0.97
16	18	3e-05	0.0027	18.4	0.8	1	23	774	796	774	796	0.98
17	18	0.0009	0.084	13.7	4.4	1	23	806	828	806	828	0.98
18	18	1.1e-05	0.00098	19.8	1.6	1	23	834	857	834	857	0.96

Sequence Information

Coding Sequence: atgttAGTAATAACGTCATTGGCGTTGGCAATGTTGATTGATTGGATAATAGCGCCAAATCGACCAGCAAGTgaagagcagcagcaacagcagcagcatctacaacaacaacaacatcagcagacTTCTACAGTCAACAACACCAGCGAAAACGTTGGCGGTGCTGACGGTGGTAATGTGCTGACACTAGAAACACAATCCATGTTAACAAATGCAGCGGGCTTAGCTGGCcagcatcaacagcaacaattgcagcagcaacatcaacaattacttgCTTCGTTGAATGCCGGCGATGACAATagacatcaacagcagcaacatgtAGCTACtgtgcagcaacagcaacaacaacaactacaacaccaCACAATAAAACAAGAAGTCAACGATAATAAATCTAATCAGCAGCTAAACATGCAACACGTTAGCGCCTccggtgccacgccctctgTGGTAACGCCAGTTGTCACAACGGGCGGCGGCACAACGATCACATTGGGCGGGCCGCCACCGCCAGTGGCGAAAACGGAAATCAAAGATGATAGCAAACCGCCAGCACATGGCATTGAAATGTATAAAGTGAACATTGAGGACATCTCACAATTGTTCACATATCACGAAGTATTTGGTAAAATCCATGGCGATGTAGTCAATCATCCATTGGCAGCGCATAGTGGTCAattgccaccgccgccgccgttgCCACCGCAAGGACATAGTAGTGCGACAAATGCCGCtgttgcagcagcagctgcaTCAACCAATAATGCAGCTGTTGCAGCAGTAATGGCATCAGCGaatgcagcagcagctgctgcAGCGGCAGCATCGGCTGCCACCAAtgggcagcagcaacagccgcCGGTAACAACGGCGACGACGACCGGCAGCGGTGCACAGCTAACGACAGCAACGGTAACCACAAGCGGTACGGGTACGACGACGACGGGTGAGTTGCTAATGCCGAAAATGGAGGGCGGACTGCAGGGTGTTGATGGTCAGACAACGACGGTGACATTGGCGCCGGATGGTACGCCAATAGCGACGGGCACGCATGTATGCGATATATGCGGCAAAATGTTCCAGTTTCGTTATCAACTGATTGTGCATCGGCGCTATCATAGCGAACGTAAACCGTTTATGTGTCAGGTGTGCGGACAGGGCTTTACGACATCGCAGGATTTAACGCGTCACGGCAAGATACACATTGGCGGGCCGATGTTTACGTGCATTGTGTGCTTTAATGTATTTGCGAACAATGCTAGCTTGGAACGTCATATGAAACGTCATTCGACGGATAAGCCATTTGCCTGTACGATTTGTCAGAAAACTTTTGCACGCAAAGAACATTTGGATAATCATTTTCGTTCCCATACGGGCGAGACACCGTTCCGCTGTCAATATTGCGCCAAGACATTCACACGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCTTTCACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGACAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCATCTTGCAAATCATATGCGTTCGCACACCAATGATACGCCGTTCCGTTGTGAGATCTGTGGCAAGAGTTTCAGCCGAAAGGAGCACTTCACCAATCACATACTTTGGCATACAGgcGAGACACCGCATCGTTGCGATTTCTGCTCAAAGACGTTTACACGCAAGGAGCATTTGTTGAATCATGTGCGCCAGCACACCGGCGAGTCGCCGCATCGCTGCTCATACTGTATGAAGACGTTCACACGGAAGGAGCATCTGGTCAATCATATACGGCAGCACACGGGTGAGACACCGTTCAAGTGCACCTACTGCACGAAAGCGTTTACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACTTATTGCACAAAGACGTTCACACGCAAGGAGCATCTGACGAATCATGTACGCCAGCATACCGGTGATTCACCGCATCGTTGCACATATTGCAAGAAGACGTTCACACGCAAGGAACACTTGACCAATCACGTGCGTTTGCATACGGGCGATTCACCGCACAAGTGTGAATATTGCCAGAAGACGTTCACGCGCAAAGAGCATCTCAACAATCATATGCGTCAGCATTCAAGCGATAATCCGCATACGTGCAATGTGTGCAGCAAACCGTTTACGCGTAAAGAGCATCTCATCAATCATATGTCACGTTGTCATACCGGCGATCGTCCGTTCACCTGTGAGACGTGTGGCAAATCGTTCCCGCTGAAGGGCAATCTGCTGTTCCATATGCGCAGTCACACCAAGGGTCAGGAGTGCGAGCGACCGTTCTCGTGTGAGAAGTGTCCGAAGAACTTTATATGCAAAGGTCACTTGGTCTCCCATATGCGTTCGCATTCGGGCGAGAAGCCGCACGCTTGCACATTGTGCAGCAAAGCGTTTGTTGAGCGTGGCAATCTAAAGCGTCACATGAAAATGAATCATCCGGACGCAAtgatgccgccgccgccagtGCATCCCCATCCGCAGATACCTGCGGGCGTTCTGACACAAGTGAAACAAGAAGTCAAACCGATCATAATACCCCATCAAGCGGCAACAATGCATACCATACAGCAAATAACCGCCGGTGCGGGCGCTCAGGCTGTGCAATTGACGCCTGGTCTGGTGCCGTTGGTCACATCGACGCTCATTTCGCACAATAGTCaaacacaaaagcaacaacagcagcagcagcaacaacaacagcaacaacagcagcaacaacagcagcaacaacaacagcagcagcaacaacagcaacaacaacagcaacaacagcagcaacaacaacaacagcaacaagcacatcagcaacatcaacaacatgttgtacaacagcaacaagcagCTGCTGCAGCAGCCGCTGCGGCTGCAgcacatcaacagcaacaacagcagcaattgcaacaacagcaacaacaattgttacAACTATCAATACAACAGGcagctcatcatcatcagcaacaacagcaggaaCAACATCGtcaacatcagcatcatcaagccgcacaacaacaacagcatccaCAGGCGCCGCCACCGccccaacagcaacaacaacagccaccaCCACAAGTGCCAATCGCACTGATTAGCGATCCAAGTGCGCTTGCACGCGCAGCCATGCAACTACAGCATTTGCCTGCCAATGTTGAACAACATCCAGTGGTTTACTAA
Protein Sequence: MLVITSLALAMLIDWIIAPNRPASEEQQQQQQHLQQQQHQQTSTVNNTSENVGGADGGNVLTLETQSMLTNAAGLAGQHQQQQLQQQHQQLLASLNAGDDNRHQQQQHVATVQQQQQQQLQHHTIKQEVNDNKSNQQLNMQHVSASGATPSVVTPVVTTGGGTTITLGGPPPPVAKTEIKDDSKPPAHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHPLAAHSGQLPPPPPLPPQGHSSATNAAVAAAAASTNNAAVAAVMASANAAAAAAAAASAATNGQQQQPPVTTATTTGSGAQLTTATVTTSGTGTTTTGELLMPKMEGGLQGVDGQTTTVTLAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHTCNVCSKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHMRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHQAATMHTIQQITAGAGAQAVQLTPGLVPLVTSTLISHNSQTQKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAHQQHQQHVVQQQQAAAAAAAAAAAHQQQQQQQLQQQQQQLLQLSIQQAAHHHQQQQQEQHRQHQHHQAAQQQQHPQAPPPPQQQQQQPPPQVPIALISDPSALARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01196137;
90% Identity: iTF_01364076;
80% Identity: -