Pmet010731.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- clz9
- Assembly
- GCA_905147745.1
- Location
- LR990524.1:15934369-15935523[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-07 4.5e-05 23.8 0.0 2 36 23 56 22 63 0.88
Sequence Information
- Coding Sequence
- ATGCCTGAATCGAAACCAAATACTAAAAACATCGATGTCGTGAAAAGAAAATTGTTCCAGTACTCACCGCATAAAATAACATTAGCGTTGAACGCAATAAAGAATGGGATGCCCGTTGCCACTGCTAGTAGAGATTTTAACGTACCTCGAACGACTTTGCGTCACAAAATTTCTGGAAAAGCGCCTGCAACTTCTGGACATGTAGGGCCCCAGTCAGTTCTTGGAAGACAAATAGAAAACGAACTTGTCATATGGATCAAAGATTGCGCTCGCGCTGGATTTCCTATCAGCAAGGAAGCTTCACTGGATTCTGTTAAGAAAATTGTTGTGAAGGGCCAAATTGCTACACCTTTTATAAATAATAGACCTTCAAGATCCTGGTTCGATGGATTTATGGCGAGACATCCTGATTTGAGCCAAAAACATGCCGAGTATATTAATAAAGCTCGTGCCTTAATAACTGAAGAGAAAATTCGGAACTGGTTCCAAGAAATTTCTTCATTGCTCGGTGATGAAAATTTAAAGATTCCAGAAAACCCTGCTAGAGTGTGGAACTGTGATGAAACAGCTTTTTTTCTAGCTCCAAAAGGATCTCTTGTGTTAGCTGAAAAGGGACAACATGTTTACGATACATCCAAAAACAGCGATAAAGAAAATATAACTACCCTATTTACTGTCAATGCCGCTGGTGAATATGCACCTCCTTTAACTATTTACAAATACAAAAGAATGAGTTCTGAAGTTCTTGACAATGCACCAAATGGATGGGGAGTTGGTAAAACAGATAAAGGATGGATGACGGGCGAATCTTTCTATGAATATGTGGCAAACGTCTTTATTCCTTACCTGAAAGAAAAAGACATTGAATTACCAATAATTTTGTTTCTTGACGGCCACAAGTCCCATCTGACTATGCATCTTAGCGAATTGTGTAGGGAAAATGGCATAATAGTTATTGCTCTTGTCCCAAATACAACTCATATGTTGCAACCTTTAGACGTTGCTGTATTTTACCCATTGAAACAGAATTGGCCTCAGATGGTCAAAAAGTGGCGCATTGAAAACGATGGACAAGAAATCACAAAATTTACATTGCCATCTGCTCTGCAAACTTTACTCCTTGATAACAAAGATAAGTTTGAAAAAAATGTGTAA
- Protein Sequence
- MPESKPNTKNIDVVKRKLFQYSPHKITLALNAIKNGMPVATASRDFNVPRTTLRHKISGKAPATSGHVGPQSVLGRQIENELVIWIKDCARAGFPISKEASLDSVKKIVVKGQIATPFINNRPSRSWFDGFMARHPDLSQKHAEYINKARALITEEKIRNWFQEISSLLGDENLKIPENPARVWNCDETAFFLAPKGSLVLAEKGQHVYDTSKNSDKENITTLFTVNAAGEYAPPLTIYKYKRMSSEVLDNAPNGWGVGKTDKGWMTGESFYEYVANVFIPYLKEKDIELPIILFLDGHKSHLTMHLSELCRENGIIVIALVPNTTHMLQPLDVAVFYPLKQNWPQMVKKWRIENDGQEITKFTLPSALQTLLLDNKDKFEKNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00044443;
- 90% Identity
- iTF_00256840; iTF_01359695; iTF_01359691; iTF_01359696; iTF_00634395; iTF_00640248; iTF_00640244; iTF_00044443;
- 80% Identity
- -