Pmet009223.1
Basic Information
- Insect
- Phlogophora meticulosa
- Gene Symbol
- retn
- Assembly
- GCA_905147745.1
- Location
- LR990534.1:11000529-11013303[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-19 7.2e-16 59.1 0.0 17 89 53 123 47 123 0.94 2 2 4.3 1.6e+04 -3.0 0.0 25 38 251 264 213 265 0.57
Sequence Information
- Coding Sequence
- ATGGGGCGCGCGACCGCACCGCACCGCATTATCGCGCCGCGCGCGCCACCGCCACCGCAGCCGCGATTTTCATTCGTTTCTAATAAATTGATACGAGGGCTACGCGACGCGCCATTGGTCGACTCGCTCCCCGGACTTCGATCCTCGGACCCTGACCGCACTCCAATCAACCGGCTACCTATAATGGCGAAGTCGGTGCTGGATCTGTACGAGCTGTACAACTTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCATCTATTACATCTGCTGCCTTCACATTACGCACACAATACATGAAGTACCTGTATGACTACGAGTGCGAGAAGAAGAACCTATCGACAAGAAGTGAGCTGGACGCAGCCATTGAAGGCAACAAACGTGAGGGGCGCCGCGCATCGGGGCAATACGACGCACAAGCTGCATTGGCTATGCCCCCACTAAACCGCGTCCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCGCTGTCGCTGGGGGGCGTGGCGCCGCGCCTGCCACCGCTGCCGCCGCACGCGCCGCACCTCGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAACAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCCCCTAGCAACGGTCCTGCGCCAATAATGTCACCTCGTGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACCCTCTGGTCGCTCTACAACAATAACAACAACAACAGCCCACAATTGGACCTTGAACCCCAACGCGAGGCTCTGAACCTGAGCGAGAGTCCCAACTCTCTGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCCCCTCGCGCCCCCCCTCGCGCCCCCCCTCGCCGCGCTCCGAGCTGCACTCGCCGCCGCAGCACCGCCACAGCCGGCGCGACGCCACGTCCCCGCCGCAGATCAACGGCATGCCCAATACCAATGGTGTCAATGGTGCTGCCTTCAAGATTACCACCAGAGGTGACGCGAGCACAGGTGACCAGCAACTGGTGGTATCAATAGAGCTGAACGGCGTGACGTATGAAGGAGTCCTATTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MGRATAPHRIIAPRAPPPPQPRFSFVSNKLIRGLRDAPLVDSLPGLRSSDPDRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQLDLEPQREALNLSESPNSLSGGKREACRSPAPPAKRRTPRPPSRPPSRPPSPRSELHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -