Ppap004455.1
Basic Information
- Insect
- Phlebotomus papatasi
- Gene Symbol
- -
- Assembly
- GCA_000262795.1
- Location
- Scaffold4:183215-210681[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.9 2.1e+03 -1.9 0.2 19 24 147 152 144 154 0.83 2 17 0.3 3.3e+02 0.7 0.2 17 38 173 191 164 195 0.80 3 17 0.88 9.7e+02 -0.8 0.2 19 41 203 222 199 225 0.79 4 17 0.024 26 4.2 2.3 14 35 226 244 214 252 0.69 5 17 0.0032 3.6 7.0 2.4 13 30 253 271 246 280 0.72 6 17 0.051 56 3.2 2.5 14 30 282 299 274 308 0.77 7 17 0.0018 1.9 7.9 3.6 17 38 313 335 301 339 0.83 8 17 0.0041 4.5 6.7 4.2 6 35 331 360 327 364 0.77 9 17 0.013 14 5.1 3.3 6 33 355 386 353 392 0.72 10 17 0.0029 3.2 7.2 5.0 5 38 386 419 382 420 0.80 11 17 0.0053 5.8 6.3 4.0 9 38 418 447 414 454 0.80 12 17 0.009 9.8 5.6 5.6 8 38 445 475 440 481 0.81 13 17 0.013 15 5.1 4.4 13 35 477 500 470 504 0.70 14 17 0.00025 0.28 10.6 4.2 17 38 509 531 498 531 0.85 15 17 0.03 33 3.9 4.7 19 43 539 560 532 561 0.91 16 17 3.3 3.6e+03 -2.6 0.1 19 26 568 575 566 579 0.85 17 17 2.3e-06 0.0025 17.1 2.2 9 44 619 650 613 650 0.87
Sequence Information
- Coding Sequence
- ATGGACTTCCGAGCTCCGGATGGATCAATATTGAAGATATCTAGTGGATTTCCTGAACCTGACATTGGTAAAGCTTTAGGAGTTGAAATGTATAAGGTAAATATCGAGGATCTCAGTCAATTTCTGTCATATCATGAGGTGTTCGGGAAGTTACCCAATGAGGCTGCACCAACAGCTTCGGGTATCAATATCGCCACCACGGCTGGAACCCTCAACATTGTTAGTAGTAGCAACAATGCAATGCAACCACCGCCACATCCACCTGTGGCCAATATTCCTGGAGACTCAGGACCACCATCTGTAAGTTCAGCACAACCGGCTATTGTGACATCAGTGCCGCCGGTGGATACCAAAATGGAGCCACCGAGTGTCCTGAATTCAGATCCCTCATTGCCCAATTCGGGGGAGAGTCCGGTCATTGTTCCGCTGTCGCATTCATGTGACATCTGCGGGAAGATGTTCCCCTTCCGTTACCAGCTCATTGTGCACAGACGCTATCACAATGAACGCAAACCATTTACGTGCCAGGTATGCGGACAGGGATTTTCCAACACGGCAGACCTGTCACGTCACGGAAAATCCCATATTGGTGGGCCAATGTTTATGTGCACGGTGTGTTTTCATGTGTTTGCAAATGATAGTAGCCTTGAGCGTCATATGAAGCGCCATGCGACAGATAAGCCATTTGCATGTACAATATGTCAAAAGACATTTGCTCGGAAGGAGCACTTGGATAATCATATAAGGAGTCACACAGGTGAAACACCATTTCGTTGCCAATACTGTGCGAAGAATTTCACACGAAAGGAGCACATGGTGAATCATGAGAGAAAGCATACAGGTGAAACACCGCATCGTTGTGATATATGCAAAAAATCATTTACGCGCAAGGAGCACTATGTGAATCACTATATGTGGCATACGGGTGAGACTCCGCATCAGTGCCAAGTGTGCGGGAAGAAGTACACGAGAAAGGAACATTTGGCCAATCATATGAGATCACATACAAATGAGACACCATTCAGGTGTGAGATATGTGGTAAATCGTTCACGAGAAAGGAACATTTTACCAATCACATTATGTGGCATACTGGTGAGACACCTCATCGTTGTGACTTCTGTTCCAAGACATTTACGCGCAAGGAACATCTTTTGAATCATGTGCGTCAGCATACAGGTGAATCACCACACAGGTGCACCTACTGCATGAAATCCTTCACGAGGAAGGAGCACCTTGTCAATCACATTAGACAACACACCGGAGAAACTCCATTTAAGTGCACCTACTGTACGAAGGCATTCACGAGAAAGGATCATCTGGTAAATCACGTGAGACAACATACGGGTGAATCTCCACACAAGTGCACCTACTGTTCCAAGAGCTTCACAAGAAAGGAACATTTGACAAATCATGTGCGTCAACATACTGGAGAATCACCCCATCGTTGTACATTTTGTATGAAGTCTTTCACGAGAAAGGAGCATTTGACTAATCACATTCGAATACATACGGGAGATTCTCCGCATCGATGTGAATTCTGCCAGAAGACTTTTACACGAAAGGAACATCTTACGAATCACTTGAGACAACATTCCAGCGAGAATCCTCATTGTTGCAATGTGTGCAATAAACCATTCACCAGGAAGGAACACTTGATTAATCATATAAGTCGATCCCATACTGGAGAACGGCCCTTTGCATGCAATGAATGCGGAAAATCGTTTCCACTGAAGGGAAATTTGCTTTTTCATCAGCGTAGTCACAACAAGGGTGCGGCTGCTGAGCGCCCTTTTCGCTGTGATTTATGCCCTAAGGATTTTATTTGCAAAGGTCATTTGGTGTCACATCGGAGATCTCATTCAGACGAAAAGCCATATGTCTGTATTCACTGTGGAAAGTCATTTGTGGAGAAGGGCAATATGCTGAGACACATTAAGAAGAATCATCCTCAAGCGGCACCAGTTGTTCTGGAGCCTCAAGTGATCATATCTCATCAAAAGGCCACCTTGCTGTCGCCACAGATAGCTACATCGAGGCCAATTTGTAGCACAACGGAGACAGTAAGTGCCCTACCTGTGACATCGACGATAACGTCCCATATCCTTCAGCATACAAATTCACAGACTGCATTGAGATTGTTGCAGAGCAGTGAACCACCACCTCCACCACCACCGCCAATTCCCGTCCATTCGCCGGAGAATTCGGTGGGGTTGCAGGTTAATGTTCACAATCACAATGCCGTCAATGCGCCGCCGCCACCGCATCAGCAGCTGAAGCCCTAG
- Protein Sequence
- MDFRAPDGSILKISSGFPEPDIGKALGVEMYKVNIEDLSQFLSYHEVFGKLPNEAAPTASGINIATTAGTLNIVSSSNNAMQPPPHPPVANIPGDSGPPSVSSAQPAIVTSVPPVDTKMEPPSVLNSDPSLPNSGESPVIVPLSHSCDICGKMFPFRYQLIVHRRYHNERKPFTCQVCGQGFSNTADLSRHGKSHIGGPMFMCTVCFHVFANDSSLERHMKRHATDKPFACTICQKTFARKEHLDNHIRSHTGETPFRCQYCAKNFTRKEHMVNHERKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCQVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKSFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHLVNHVRQHTGESPHKCTYCSKSFTRKEHLTNHVRQHTGESPHRCTFCMKSFTRKEHLTNHIRIHTGDSPHRCEFCQKTFTRKEHLTNHLRQHSSENPHCCNVCNKPFTRKEHLINHISRSHTGERPFACNECGKSFPLKGNLLFHQRSHNKGAAAERPFRCDLCPKDFICKGHLVSHRRSHSDEKPYVCIHCGKSFVEKGNMLRHIKKNHPQAAPVVLEPQVIISHQKATLLSPQIATSRPICSTTETVSALPVTSTITSHILQHTNSQTALRLLQSSEPPPPPPPPIPVHSPENSVGLQVNVHNHNAVNAPPPPHQQLKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01191366; iTF_01192017; iTF_01191360;
- 90% Identity
- iTF_01191360;
- 80% Identity
- iTF_01192017;