Ppap006289.1
Basic Information
- Insect
- Phlebotomus papatasi
- Gene Symbol
- lrrfip2
- Assembly
- GCA_000262795.1
- Location
- Scaffold66:408500-416108[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-105 3.4e-101 337.8 37.7 1 300 60 348 60 348 0.96 2 2 0.051 5.6e+02 -1.1 4.0 220 245 376 401 352 421 0.47
Sequence Information
- Coding Sequence
- ATGTCACAGGACTCAGTTCTATACAATTTAGACAATTTATTTAATGAAGAAATAGAAAATGTGGAGGACTATACTTTAACAGAATGCAAAAGTGAAAACTACGACAATATACCATGTATTTATTCAGATGTTGAAAATGAAATGATTTCGTCATTTTTAGAGCATACGAATGACCTTGCTGAAGCTCGTCTAGCAGCAAGAAGGCAAGCTCGTGCTGAAGCAAGAGAAATTCGTATGCGAGAATTGGAACGACAACAGAAGGAGCAAGAACAAAATGCTGACCGTGTGTTTGATATGCATAATAATGCTAATATAGATGGAACTAATAGAAGCAGAATTGCAGTATCATCTGTATCTAACTCAACGGGTATACGTAGTAGCAGTACAATCTCACGTAGAAGCAGCGAAGACTCTCTTGAGGAAGAGGGTCGGAGTCTCAGGGATATTCGATATGAACTTAAGGATATGGAGGAACGTTTTCGTAAGGCTATGATTACCAATGCCCAGCTGGACAACGAGAGAGCGTCACAATCATATCAAATACAACTGTTGAAAGATAAATTAGAGGAATTAGAAGAAACAAAGGCTCAATTGAATCGGGAACATAAGGATAAATGTCGTGAATTTGAGTCACTTAAGCGAAATAATGAGAAACTTCAGGAAGAGTTTAAGTTGGTTTTGGGTCAACTTCAAGAACGTGACATACTTATTGCTGAACAAGGATTAGTTATAATTATGATAGAAAATGAGGATAGCACAGATGCCAAACGCACTCTAGTCAGCTTAGACAATGCTCAATATTTGGAATCTGTTCAGGGCTCTTTAGATGTGCGATTGAGAAAGCTCAAAGAAGAGAAGAATCAGCTTCAATTAGAAGTACAGAAGATGCACGAGAAAATGTCAGAAGCGAAAACACAAGGTCGACGTTCAGGATCACTTAATGGACCGTTTGGGGATGATATTGAAGATATACAGAGAGAAGCCAATAAACAAGTCACTGAATACCGATATAAATTGCAAAAAGCTGAAGCTGAAATAGCAACACTACAATCTACATTAGCAAGGTCGGAAACACAAGTTATTCGTTATAAAAGTACTGCTGAGGCTGCGGAAAAGGCTGAAGCGGAATTAAAAATCGAAAGAAGGAAATTGCAGAGAGAGAATCGAGAAACTATGGAGAGATTGGAAGAACTTGAGACAGCCAATAATCATTTATTGAAACGGATGGATAAACTTAAGAATGCGAAAAGTGCACTATTCAAGGATATATGA
- Protein Sequence
- MSQDSVLYNLDNLFNEEIENVEDYTLTECKSENYDNIPCIYSDVENEMISSFLEHTNDLAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHNNANIDGTNRSRIAVSSVSNSTGIRSSSTISRRSSEDSLEEEGRSLRDIRYELKDMEERFRKAMITNAQLDNERASQSYQIQLLKDKLEELEETKAQLNREHKDKCREFESLKRNNEKLQEEFKLVLGQLQERDILIAEQGLVIIMIENEDSTDAKRTLVSLDNAQYLESVQGSLDVRLRKLKEEKNQLQLEVQKMHEKMSEAKTQGRRSGSLNGPFGDDIEDIQREANKQVTEYRYKLQKAEAEIATLQSTLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENRETMERLEELETANNHLLKRMDKLKNAKSALFKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01191197;
- 90% Identity
- -
- 80% Identity
- -