Parg004657.1
Basic Information
- Insect
- Phlebotomus argentipes
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947086385.1
- Location
- CAMTYR010000034.1:5196289-5198820[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-105 1.2e-101 339.5 35.4 1 300 68 356 68 356 0.93 2 2 0.13 8.2e+02 -1.5 4.1 220 245 384 409 360 429 0.47
Sequence Information
- Coding Sequence
- ATGACAGAGGAGGCAGAAGATGTGTACAGTTTAGTTGATCTCTTCGCCAGAGACAGAGAAGACGTGACTGATTGCAGTTTAGTTGGTAGTGCAGATGAGGAGGAATTGACGACGTCTGCAGAAAATCAGGATGAAGATGTTCATCATGGCGATGTGGATGATGAGATTCTTTCAACATTCCTGGAGCATACAAATGATCTTGCTGAGGCCAGATTAGCTGCCAGACGCCAGGCGCGCGCGGAGGCGCGAGAGATTCGGATGCGGGAATTGGAGAGGCAGCAGAAGGAGCAGGAACAAAATGCTGACCGTGTGTTTGATATGCACAACAACTCCAATGCGGATGGAATTGGGAGAAGTCGAATCGCGATATCATCCGTGGCAAATTCCACAGGCATCCGCAGTGGGAGCACGATCTCGCGACGGAGCAGTGAGGATTCACTGGAAGAGGAGGGACGAAGTCTCAGGGATGTTCGATATGAACTCAAGGAAATGGAGGATCGCTTTCGCAAGGCCATGATCACGAATGCTCAGCTCGATAACGAGAGAGCTTCTCAGTCATATCAAATACAGCTGCTTAAGGATAAGTTGGAGGAGTGCGAAGAGGCGAAGGCGCAACTGAGTCGCGAGCATAAGGACAAGTGTCGTGAGTTTGAGGCTCTAAAGCGGAGCGACGAGAAGCTGCAGGAGGAGCTGAAACTGGTGCAGGGACAGCTTCAGGAGCGTGACACTCTAATTGCCGAGCAAGGATTAGTAATAGTGTTGGTGGAGAATGAGGATGGCACAGATGCCAAACGGACTCTAGTCAGCGTAGATAATGCCCAGTTCTTGGAGTCTGTGCAAGGTTCTCTAGATGTGCGACTGAGGAAGCTGAAGGATGAGAAGAATCAACTTCAGGCGGAACTGCAGAAGATGCAAGAGCAAATGCTAGAGATGAAAACACAAGGAAGACGATCAGGATCTCTCAATGGACCCTTTGGGGATGACATTGAAGATATACAACGAGAAGCAAATAAACAAATCACTGAATACCGGTACAAACTCCAAAAAGCCGAAGCCGAAATAGCGACACTTCAGTCCACCTTGGCCAGATCAGAGACGCAAGTGATTCGGTACAAGAGCACAGCCGAGGCGGCTGAAAAGGCTGAGGCGGAATTGAAGATCGAGCGGAGAAAATTACAGAGAGAGAATCGGGAAGCGATGGAGCGACTTGAGGAACTGGAGACGGCAAATAATCATCTGTTGAAAAGAATGGATAAGCTAAAGAATGCGAAGAGCGCGTTGTTTAAGGACATATGA
- Protein Sequence
- MTEEAEDVYSLVDLFARDREDVTDCSLVGSADEEELTTSAENQDEDVHHGDVDDEILSTFLEHTNDLAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHNNSNADGIGRSRIAISSVANSTGIRSGSTISRRSSEDSLEEEGRSLRDVRYELKEMEDRFRKAMITNAQLDNERASQSYQIQLLKDKLEECEEAKAQLSREHKDKCREFEALKRSDEKLQEELKLVQGQLQERDTLIAEQGLVIVLVENEDGTDAKRTLVSVDNAQFLESVQGSLDVRLRKLKDEKNQLQAELQKMQEQMLEMKTQGRRSGSLNGPFGDDIEDIQREANKQITEYRYKLQKAEAEIATLQSTLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETANNHLLKRMDKLKNAKSALFKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01191901;
- 90% Identity
- -
- 80% Identity
- -