Basic Information

Insect: Philotrypesis tridentata
Gene Symbol: PAXBP1
Assembly: GCA_018906965.1
Location: JACCIB010000009.1:1651214-1656663[+]

Transcription Factor Domain

TF Family: GCFC
Domain: GCFC domain
PFAM: PF07842
TF Group: Unclassified Structure
Description: This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.7e-28 5.8e-24 86.2 0.9 3 272 542 750 540 752 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.7e-28	5.8e-24	86.2	0.9	3	272	542	750	540	752	0.91

Sequence Information

Coding Sequence: ATGTCGCTGTTCAACAAGCCCAAACGAAACATCCGCCGTCGGGACTTCAACGACGAGGAGGAGGAGAATGAAAACAGGTCTATGGAAACCGAGGACATGCAGATACTTAGAAACAAAGTCAAGAAGAAGGATAAGCCGAAGCAGACTCTCCTGAGCTTCGGAGATGACCTGGACGAGGCTGATGAGGGTGAGGTTTTTAAAGTGAAGAAATCATCGAGAAGCAGAAGGCTGATGAAACAACTCGACCAAGAGAGGAAGAAAAAGAAAGGTGAAGAGAAAATGCAAGTGGATTCTGACTCAACAATCATGTCTAATATGCAGGAAAAAGATTTAGAAATAAAAACAGATGATCTAGTAGTCAAAATAAAAAATACTGGTCCAATGATTTTAAATGGCAGGGATGCACTTACAGCTGGTAAGGATGATTACAGTTCCGAAGATGAAGTTGACAACAATCGAGGACACAAATTCCAAAATAAGTCGGATAGATCAGAGAATGTGAAATTTTTCCTTCAAAGTGGTTGCATACCAGATGCAGCAATGATTCATGCAGCAAGAAAACGCAGGCAAAAAGCTAGAGAGTTGGGCCATGATTACATTCCAGTTGAAGAACAAAGTGATGATAAGGGAACTTCCAGACTGGTGCGTGAAGAGGATCATGACCGAAGTGATGATGAAGATTCTCAGGAGAGAATAAATATGACTGTTGATACAGATGCTTTAGACAAGGAAAAACGACGACAAGCTTTTCTAGAATCACAAGCTCCAGTAATAAAAGTGTCTGATGAAGAAAGTGAGCCAGAAGAAGAAGAATGGGAGGTTCAACAAATTAGAAAAGGTGTTACTGGAGCACAGATTGCAGCTGCCCATCAAGATTCTATTGTACAATATAACATGTTGGGAATTGGTCCTAGTCATATGATGGAATCTGGTATCCCAATGATGACGTCCAATGTAATACCAGCAGCTCCACCACCTCCTATGATACAACCACCAGACCCTACGAAATGTGTACCAATTACTGCTGAAGAAGTATTGAGCAAAATGCGTGAAAGGTTGAATAATTTACGAGAAGTTCACCGGCGACACGAATTAAATTATGATGCTGTGATCCATGAATTGCTTCAAAGTAAAAAGGAATTGGAAGACGGCGAAAATCGAGCACCAGAGATGGCACAACGCTACAAATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTAATGAGAAGCTGCCAAAGGTTGCTGCGTTGGAGTCTCGTTGGGTAGAACTATACGGTGACCGAGCAACGGAACTAATGGAAAGAAGAAGACAAGATACAAGAGACCAAGCTGAAGAAGTAACAAGCGCTTCAAGAGGACCAATTTTAAGAAGAGGTCCAGAGGATGATGCACGCATGAGAAGAGCTACAGAAAGAGAAGGCAGAAGAGCTCGCAGAAGAAGAGCACGAGAACTTAACCCAGTATTACCCAGACACATGGATGGAATGTCCAGTGATGACGAAGTTACTGAACAACAAAATCTAGTTTTCCGACAACTTAAAGATGAGATCGAAAAAGAATCTCGAGAGCTTTTTTCCGACGTCGAAGATGATTTTTGCACAATTCGAGGAATTTTATCAAAACTTGAAGATTGGAGGTTAACTGATTTAGAATCTTATAACGATGCGTATGTTCCTCTTTGCATTCCAAAAATCATTTCACCTATCATACGCCTTCAACTTGTTACGTGGAATCCCATAATGGAAAGCGCTGAGCTAGAAAGATCCAAATGGTATAATACCTTAATTTTATATGGTTTGGATATAAAAGAGTCTGAGGAATCATTACGCTGTGATCCAGACGTTCGATTGATACCGTCAACAATTGAAAAAATTGTTGTTCCAAAATTGACAACTATTGTTGAAAAAATATGGGATCCTATGTCGACATCACAGACGCTTAGACTAGTGGGACTAATTAATCGTTTAATCAGAGATTATCCCAATTTAAATGAAACCAGTAAACAACTAGAAACACTTTTCAATGCCATATTTGATAAAATTAAATCTGCTGTTGAGAATGATGTTTTTGTTCCTATACTTCCCAAACAAGTCATGGATACAAAACATCAATTTTTTCAACGTCAATTTGCCATGGCAATTAAATTACTTCGAAATTTCCTGAGTTGGCAAGGTCTATTGGGAGATCTTAAATTAAAAAATATTGCCTTAGGATCGTTGTTAAACAGGTATCTTCTCGCAGGATTACGAATTTCACCTCCAGTCGATGCTCTTACCAAAGCTAATATGATTATGAGTACACTACCACGTGCTTGGCTGCAGGGAGAAAAAATTGAACATTTAAAAATGTTCGCTACCCTGGTCCGACAGCTGAGCGAACAACTTGACCAAGCTAATCCAGCTCACAACGAGGCATGGGAGTACTCGAAATCTATCTTGAAGATAATCAAACCTCTGTAA
Protein Sequence: MSLFNKPKRNIRRRDFNDEEEENENRSMETEDMQILRNKVKKKDKPKQTLLSFGDDLDEADEGEVFKVKKSSRSRRLMKQLDQERKKKKGEEKMQVDSDSTIMSNMQEKDLEIKTDDLVVKIKNTGPMILNGRDALTAGKDDYSSEDEVDNNRGHKFQNKSDRSENVKFFLQSGCIPDAAMIHAARKRRQKARELGHDYIPVEEQSDDKGTSRLVREEDHDRSDDEDSQERINMTVDTDALDKEKRRQAFLESQAPVIKVSDEESEPEEEEWEVQQIRKGVTGAQIAAAHQDSIVQYNMLGIGPSHMMESGIPMMTSNVIPAAPPPPMIQPPDPTKCVPITAEEVLSKMRERLNNLREVHRRHELNYDAVIHELLQSKKELEDGENRAPEMAQRYKYYQELRGYVTDLVECLNEKLPKVAALESRWVELYGDRATELMERRRQDTRDQAEEVTSASRGPILRRGPEDDARMRRATEREGRRARRRRARELNPVLPRHMDGMSSDDEVTEQQNLVFRQLKDEIEKESRELFSDVEDDFCTIRGILSKLEDWRLTDLESYNDAYVPLCIPKIISPIIRLQLVTWNPIMESAELERSKWYNTLILYGLDIKESEESLRCDPDVRLIPSTIEKIVVPKLTTIVEKIWDPMSTSQTLRLVGLINRLIRDYPNLNETSKQLETLFNAIFDKIKSAVENDVFVPILPKQVMDTKHQFFQRQFAMAIKLLRNFLSWQGLLGDLKLKNIALGSLLNRYLLAGLRISPPVDALTKANMIMSTLPRAWLQGEKIEHLKMFATLVRQLSEQLDQANPAHNEAWEYSKSILKIIKPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00143870;
90% Identity: iTF_01035418;
80% Identity: -