Basic Information

Gene Symbol
hang
Assembly
GCA_963971545.1
Location
OZ020607.1:23408607-23423021[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.064 22 8.1 1.3 3 23 409 430 408 430 0.93
2 19 0.04 14 8.7 3.5 3 22 536 555 534 555 0.90
3 19 0.037 13 8.8 0.9 1 22 630 651 630 653 0.90
4 19 1.6 5.8e+02 3.6 0.6 2 21 665 684 664 685 0.93
5 19 0.0027 0.93 12.4 0.2 3 23 780 801 779 801 0.96
6 19 6.3e-05 0.022 17.5 0.1 1 23 809 832 809 832 0.96
7 19 1.8e-05 0.0062 19.3 0.1 2 23 926 947 925 947 0.97
8 19 0.17 60 6.7 3.2 2 23 1014 1036 1013 1036 0.94
9 19 0.0044 1.5 11.7 0.2 2 23 1045 1067 1044 1067 0.95
10 19 0.00021 0.072 15.9 0.2 1 23 1080 1103 1080 1103 0.98
11 19 0.00014 0.048 16.5 1.1 1 23 1165 1187 1165 1187 0.99
12 19 0.0021 0.74 12.7 0.9 1 23 1195 1218 1195 1218 0.96
13 19 0.045 16 8.6 0.3 2 19 1226 1243 1225 1244 0.94
14 19 2.1e-05 0.0074 19.0 0.4 3 23 1317 1337 1316 1337 0.98
15 19 7.6e-05 0.027 17.3 0.8 1 23 1372 1394 1372 1394 0.96
16 19 0.00014 0.05 16.4 0.5 2 23 1453 1475 1452 1475 0.92
17 19 0.62 2.2e+02 5.0 0.8 2 19 1495 1512 1494 1514 0.93
18 19 0.019 6.7 9.7 0.2 3 23 1530 1550 1530 1550 0.98
19 19 0.00038 0.13 15.1 1.3 1 23 1796 1818 1796 1818 0.98

Sequence Information

Coding Sequence
ATGAAGCAAACGAAAATAGCTACAAAATATACCGTTAACCGTCGTCAATTTACAATAAATCCCGATGATCATCTGTCGCTGCGAATCTGTCATGCGTGCATCAGTTACCTGAATTCCTGGCAGAGCTTTAAGAATCGCTGCATTACCTCGCAAAGTAAGCAGCGCAATTGGTTGGAATCCCTAAAACGGCAACAGTTGCACGACAACAATGTCAGCATATCAACAATCAGTGCAGATAGCACTACGCAGCACCAACAACGTCACCAATCCGAAGAGAGGGAGCAGCATACATCAAGTTTAGCATCATCGATTTTGGATGGCATTACGTCGTTGAAGAAACGCAAATCTTTAACTGTTTATGTGAGTCCTAAAGAAAACCCCCCAACTActtctactactactactactactactactactagtACTACTACCACTAGTACTACTTGTACTTCTACTACTACCACTACTGCTAGTAAACAGCAATTAATACCAACAATAACAGCAGCATCGTTAATTCCGAAAAAATCGACACAACAGCCTGAACAACAACTGCTGTTGCAAACTCAAATGCCACATAAAAAGTATAGTAGACAATTTTCGCCTACAGTTGACTTAATTGGTGCTGCTGGTGCCGGACGCGTACAATCCCTGGCACTGCCACAGCCTACAGTGCGCAGAGCTAGGCATTACCATCGTTCAACGATGCACCAGCGGCAACAGCAGCACCATCAGCAACAGCAAAAAGAATTGCAACAACACGTGCAAGCTGAAGTGGAAAAGTTTCAgaggcaacagcaacagcagatGTTGCTGCAAGAGCAGCAAAAATTGCTAGaccaacagcagcaacaacaacaacagcagcaacagcagcaacaacagctaCAACAGCTACAACAGCTACAGCAACATCAAATGCAGCCCATTGCTGTCGAAACGTCCACTTCATGTCAGAGTGCAGCGCAGCAATTGCGTTTGTTTAGACGTTACACGTACAACAACCCATTGCCTGCGGTGGAAATTAAAGATGAACCTATGGATCCGGATGACGATTACAGTGGAAAGCAGCACGACGAGTCAGATGATATGGTCGATCCTACACTCTTCTTGGAGCGCACCGAAGAGGAGGGCGACGAGGCAATTATgGAGCATATGTCTTATCATTACGAACCCCCTCGTCCAGCCATTGAACTTGCAGCCCTCGCAGACACCAAGGAAGCATCTTGTCGTGCCTGCAATCTAAAGTTTTCTACGCGCGCCAATGCACGCCGCCATGAGCGAAATTTGCATCCCAATCTCTTTGAGTTGTCCACTTCAACGCCAAATAATATGCCCGTGACCAAGCCGACGCCCGCACTGGCTGCCGCCTTAGAACTACAACGTGCCTCGGCGGCCGCTGTGGCTGCTGCAGAAGCTTCGAAAGCAGCTTCGGGCATGATAACACCTCTCAAGTATCGACAAGAAATTGTGAATGCATTTAATAAATGTGAAATTGGTGGCTTTGACTATGAGCATCCGGAGAAGTATCAACAACATTTGACTGATGAGAAAATCGTTTTCCTACAACAAAACGATGAATTTTTGCGCCAATATCAGAATATGACTTGCCGCTGCTGCAATAAAACCTATTcaacttacaaaaatttcatgGCACACATGCGCAAAAAATACCTTACATTGCCGCGCAATCTTTGCTTCAATTGTCTCAAACTAAACGACTCGAAGGCGCTGTTTATATCACATTTGAAACGTCGCAATTGCATCAATTTATACAAGGTTCTGCATGCGCTTATGGCGAAGGACACCAGTTTTGCCGCTGCGGTGACTGCGACGGCGGCTGCTGTGCCCGATAAGTTGCGCGCCAAGGAGTTGCTTGTCAATAAAATGTACGAATGCAAATTGTGCCCGAAACGTTATCGACTAAAGTTGGAATTCCGTTCGCATGTGTACGATGCACACGCCGACATGCAGCGCAAGGATACGatgcaaaagcaatgttgttacTGCGGCTTAGAGTTGGATGATCCAGCTGAGCGCAAACGGCATTACAATAACATGGATTGCATTGTATCGCTGCGCTGTGTTACATGCGATGCAAAATTCGATAATCATCAAAGATTCTTGGATCATGTGTATGAGAAGCATTTGGCTGGTTTTGGCGAGCAGACGTCGACATCGGCGCTTAATGTGAGCGCAGTGAACACAGAGAATTCACCGGGCAAAAAGTCATCAGCTGGTTTGGGTGGCGCATCATCCACCGACGAGTCACGCAGCAGCCTTCATGCCGCGTCCTCGGCTCAGCAAAAGTCACAATATTTTTCGCGTATGCCACAAGCTTGTCCAATATGTGATCAACAATATAACAACTATAACAATGTGCTGCGTCACATGGAATCCAAACATCCTGATCAATTGCCACAGACCTACAAGTGCGTAAAGTGTGGCATTGGCTATCCACGTTTATCCAACTTGCGCGAGCACATGGTTAGCGCACATGCGGCAGACAAAGCACGACACACTGGTTTCGAATACATTGTGAATGCGGATGCGGTGAAAATAGCCTATGGTACTACTCAAAATGTGTATACGGGACGTTATGATTATGTGATGAAAGATTTGATGTCAATAACGAATGGCGGTTCAATCGctgaCGATGACGAGAACTCCAGTGAGAATGTAGTCAAGAAAATGCGCACAGATAGCGGTGCCGCTGTAACGACTAGCACCGGATCTGGCAATGCCAGCGGCAGCGGTAACATGTATAGCAGCCTGAAGGAGTGTCCCATTTGTAATGCGGTCTTTAGCAACAATATAGGCCTTTCTAATCACATGCGCTCACATAGCGCTGCTGGTCAGAATAATAGTATGTCACCGGCAGCGGTGAACGTCAGCAAATCGGCCCCCAGCGGGCTCACCATAACACCTGCGCCACCCTCAAAACCATCGACCCCACCAGCTATGCAGCATCAGACAGCAGCACAAAAGGCGATATTTAAACGCAGTCTGGAACAGGCTGCCGACCGTCGCTTCCGACGCATGCGCTGCCGCCTCTGTCAGCGTCGGTTCTCATCGAAGAAATCATATCGTTTCCATATGCTCAACGATCATCAAATACGCAATGTGCAATTTATTAAATGCAAATTGTGTGATGCAGAATTTGCTTATGAGAAGGGCTTGAAGGTGCATATGTTCAAAATACATAATACGCTGCTAAAAGACGAAATGATTATCAAGCAATTCGAGTGTGATATTTGTTCAATTGTGTATCGCAGTGAAGATCAGTTGCAGTTGCACAAGAAGACTGTACACGGTGGCGTCACAACAGGTGCAGAGCAACAGAAGCAACATGGCGGCGACGAAGCAATGGACGATGTAAACGCTGCTGCCAATCACGCAGATCGCTCTGGCATATCAACGCCAGCCAGTGGTGTGGCTGGCGGTAGTGGGGAACGCAGCACAGTAGATACATCTGCTGCTGGACCGCTGTACTGGTACCAATGCAAGTATTGTCCATCGAATTTCAATACCAACAAAAAGCTTgcaatacatataaattcacatgACGAGTTCGATTCAAATGATTATTCGTGCAAGGATTGCGGTAATGTGTACAGCGGACGCAAGAGTTTATGGGTGCATCGCTACAAGAAGCATCCACAATTCCCCGAACCCTCTGAGTGTGTGCTCTGTAAAAAGGTCTTCTTCGATAGTCAAATGTTAACGAATCACACCCCAACCTGTAATCGCAAACCAATTACAGCGACTGGTGCCGTGGCCGAAATTGCTGGTCCTCCCCCTGTTTACAAACACAAGACCGgcgatgatgatgacgatgaagGTTCACATGATACTAGCCGTGTAATTACGACGAGTGCGCTGGGTGGTGGTGAGCTAGAGATAACGCCCATACCGGCGAGCGGTATGAAGATAAAACTACCCGAAGTAGCTTGCACAATATGTGGTCAACGTTTCACCGATCAAGAGTTATTTTCcaaacacatacaaatgcatgaAATGGAATTGTATACGGATAATCCGCTTGCGGCCATGTTTGATACAGGTCCAGCGGATCCGAATCAATTCTACTTGGATCGGGTGAATGATAATGGCGAGTTCGCCTGCGATCTGTGTAATAAAACGTTTACACAAATGACTGCACTTAAAGTGCATCGTAAATGGCATTTCAGAGGTGATAGCAAACAGAACCAAGCCGACGTGGATCATTCAGCCAATGCAGCGAAACCATCATCCCAGATCCAGACCAACCATCAACATCCACTGGGATTACAAGCAGTGGGCCTTATGCCCAACCCGCAACATCACTCTTCAAAATCCCAGAAACGCAAACGCGAACTTAAATGTGAATACTGTCCGTCCACATTCATAAGCAACAACAACCTGCGTCGTCACATCTACGAACTGCATAAAGATGAGATTGGCAATTTGCCTGTGCCACCGAAAATTAAAACTGATCCATATCTACAATGTCGTCGTTGTCAGCAAAAGTTCGAAACAAAACACGAATGGATTGAACATAAAGTGGCGGATGCGCGTGTAACAAAACCTTTCGGTCCATTCCAGTGGGGTTGTGAGCTATGTGGTGCATATGTTTCGCGCAAAGAGAAGCTGATCAATCATATAAATAATCATATGAAGGAGAGGGAAATAGTGCCGGTGGAAGATGAACAACAACAGGCGAATGATCAGAATCAGAATCGTGCGGTGTCGAAGGTAGTGGCGGCGGCGGAAAATATGGTCGTGGGCGGTGGGGAAATCGTGGTGAAAAGTGAAAGAGACGATGATAAGGAGGAATCAAATGATGGTGTTAAAGAGGAAGAATCCGATGAGGAAGCTGATGAGGTAGATGGTGAAGAAGAGGACGGTGATTTGGAGCGAAAAGTTGAAAAAGAGGCTCAAAGACATGGTGAAGAGTCAGAAGATGAAGCCGATGAGGAAGCTTCTGAGGAAGAGGATGATGAAGATTTTGAAGATGTGGGCAATGGGATGCAAGCCGCAATAAATGAGCATGCCAATGATGAAGCGGAGCAAGAAGACAATGACGAAGGTGATGCTGATGATGGCGAGGAAGATGAAGCAGATGCGGACGATATGGATGACGTCGATGTAGATAATGAAGATTCGAATGACAATGTAGCAGCGTCGAATGGACGGGCGTATGGGCGTGTGCCAGCTGTGTCGTCGGAAGTCACCATTGAACCTATACGCAATTCGACGGATACGACCGATGACTCATCGCGGTCATACGACGAAGATGACGACGATGACAATGACAACGACAATGATTCGGATGCGGATAGTGATGCGGAAAGTGGTGATAGTTCTTCGCAGGGATCGAAAACGCTAGCACCAACGCCCAAAGCACGCTACTCCTGCGACCTCTGCCGTCTATTCTTCGACACACAACAGGAGCTGCAGAAACATGTGAAAATGCATTTCCTCAATGGGCCCGGCTCGGTGTCACTAACCGAAATCAAACCAAAAGCAAGCAACAAGTCGAGCCGCAGCAGTAGCAGTGATGTTGTGGCGGTGTAG
Protein Sequence
MKQTKIATKYTVNRRQFTINPDDHLSLRICHACISYLNSWQSFKNRCITSQSKQRNWLESLKRQQLHDNNVSISTISADSTTQHQQRHQSEEREQHTSSLASSILDGITSLKKRKSLTVYVSPKENPPTTSTTTTTTTTTSTTTTSTTCTSTTTTTASKQQLIPTITAASLIPKKSTQQPEQQLLLQTQMPHKKYSRQFSPTVDLIGAAGAGRVQSLALPQPTVRRARHYHRSTMHQRQQQHHQQQQKELQQHVQAEVEKFQRQQQQQMLLQEQQKLLDQQQQQQQQQQQQQQQLQQLQQLQQHQMQPIAVETSTSCQSAAQQLRLFRRYTYNNPLPAVEIKDEPMDPDDDYSGKQHDESDDMVDPTLFLERTEEEGDEAIMEHMSYHYEPPRPAIELAALADTKEASCRACNLKFSTRANARRHERNLHPNLFELSTSTPNNMPVTKPTPALAAALELQRASAAAVAAAEASKAASGMITPLKYRQEIVNAFNKCEIGGFDYEHPEKYQQHLTDEKIVFLQQNDEFLRQYQNMTCRCCNKTYSTYKNFMAHMRKKYLTLPRNLCFNCLKLNDSKALFISHLKRRNCINLYKVLHALMAKDTSFAAAVTATAAAVPDKLRAKELLVNKMYECKLCPKRYRLKLEFRSHVYDAHADMQRKDTMQKQCCYCGLELDDPAERKRHYNNMDCIVSLRCVTCDAKFDNHQRFLDHVYEKHLAGFGEQTSTSALNVSAVNTENSPGKKSSAGLGGASSTDESRSSLHAASSAQQKSQYFSRMPQACPICDQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGIGYPRLSNLREHMVSAHAADKARHTGFEYIVNADAVKIAYGTTQNVYTGRYDYVMKDLMSITNGGSIADDDENSSENVVKKMRTDSGAAVTTSTGSGNASGSGNMYSSLKECPICNAVFSNNIGLSNHMRSHSAAGQNNSMSPAAVNVSKSAPSGLTITPAPPSKPSTPPAMQHQTAAQKAIFKRSLEQAADRRFRRMRCRLCQRRFSSKKSYRFHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDEMIIKQFECDICSIVYRSEDQLQLHKKTVHGGVTTGAEQQKQHGGDEAMDDVNAAANHADRSGISTPASGVAGGSGERSTVDTSAAGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQFPEPSECVLCKKVFFDSQMLTNHTPTCNRKPITATGAVAEIAGPPPVYKHKTGDDDDDEGSHDTSRVITTSALGGGELEITPIPASGMKIKLPEVACTICGQRFTDQELFSKHIQMHEMELYTDNPLAAMFDTGPADPNQFYLDRVNDNGEFACDLCNKTFTQMTALKVHRKWHFRGDSKQNQADVDHSANAAKPSSQIQTNHQHPLGLQAVGLMPNPQHHSSKSQKRKRELKCEYCPSTFISNNNLRRHIYELHKDEIGNLPVPPKIKTDPYLQCRRCQQKFETKHEWIEHKVADARVTKPFGPFQWGCELCGAYVSRKEKLINHINNHMKEREIVPVEDEQQQANDQNQNRAVSKVVAAAENMVVGGGEIVVKSERDDDKEESNDGVKEEESDEEADEVDGEEEDGDLERKVEKEAQRHGEESEDEADEEASEEEDDEDFEDVGNGMQAAINEHANDEAEQEDNDEGDADDGEEDEADADDMDDVDVDNEDSNDNVAASNGRAYGRVPAVSSEVTIEPIRNSTDTTDDSSRSYDEDDDDDNDNDNDSDADSDAESGDSSSQGSKTLAPTPKARYSCDLCRLFFDTQQELQKHVKMHFLNGPGSVSLTEIKPKASNKSSRSSSSDVVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-